Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Trachymyrmex_20zeteki_20[refseq_20GCF_5F001594055.1_202016-03-31] 4,623 sequences; 267,973,152 total letters Query= NC_013756.1 Length=368454 Score E Sequences producing significant alignments: (Bits) Value seq4552 159 8e-34 seq3876 132 1e-25 seq4069 104 6e-17 >seq4552 Length=86203 Score = 159 bits (176), Expect = 8e-34 Identities = 166/218 (76%), Gaps = 0/218 (0%) Strand=Plus/Minus Query 199409 CGAAGTCTCAGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTC 199468 ||||||| | || | |||||| || || || ||||||| |||||| |||| | ||| Sbjct 4464 CGAAGTCGTAAAACTAAGTGGAGTGTAGATTCTTTTTGGATGTTGTAATCAGAAAGAGTT 4405 Query 199469 CTTCCATCTTCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCT 199528 || || |||||||| ||||| || |||||||| | |||||| || || ||| |||||| Sbjct 4404 CTGCCGTCTTCCAGTTGCTTGCCAGCGAAGATTAAACGCTGTTGATCTGGAGGGATTCCT 4345 Query 199529 TCTCGCTCCTGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAAC 199588 ||| |||||||| || ||||||| ||| | ||||||| | ||| || || | Sbjct 4344 TCTTTGTCCTGAATTTTGGCCTTCACGTTTTCAATAGTGTCTGAAGCTTCGACTTCAAGA 4285 Query 199589 GTGATCGTCTTACCCGTGAGAGTTTTCACAAAAATTTG 199626 ||||| || ||||| ||||||||||||||||||||||| Sbjct 4284 GTGATGGTTTTACCTGTGAGAGTTTTCACAAAAATTTG 4247 Score = 152 bits (168), Expect = 1e-31 Identities = 165/219 (75%), Gaps = 0/219 (0%) Strand=Plus/Minus Query 199408 TCGAAGTCTCAGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGT 199467 |||||| | ||| || | ||| || || || || ||||||| ||||||||| | | ||| Sbjct 4237 TCGAAGACGCAGAACCAAGTGAAGTGTGGATTCTTTTTGGATGTTGTAGTCGGAAAGAGT 4178 Query 199468 CCTTCCATCTTCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCC 199527 || ||||||||||| || || ||||||||||| |||||||| || ||||| |||||| Sbjct 4177 TCTGCCATCTTCCAGTTGTTTACCGGCGAAGATCAGACGCTGTTGATCCGGTGGAATTCC 4118 Query 199528 TTCTCGCTCCTGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAA 199587 ||| ||||| || || ||| ||| ||| | |||||||| | ||| || || | Sbjct 4117 CTCTTTGTCCTGGATTTTAGCCTTTACGTTTTCAATGGTGTCTGAAGCTTCGACTTCGAG 4058 Query 199588 CGTGATCGTCTTACCCGTGAGAGTTTTCACAAAAATTTG 199626 || || || ||||| |||||||||||||| || ||||| Sbjct 4057 GGTAATGGTTTTACCGGTGAGAGTTTTCACGAAGATTTG 4019 Score = 129 bits (142), Expect = 1e-24 Identities = 160/219 (73%), Gaps = 0/219 (0%) Strand=Plus/Minus Query 199408 TCGAAGTCTCAGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGT 199467 |||||| | ||| || || || ||||| || || || |||| ||| ||||| | | || Sbjct 3781 TCGAAGACGCAGAACCAGATGAAGAGTAGATTCTTTCTGGATGTTATAGTCTGAGAGTGT 3722 Query 199468 CCTTCCATCTTCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCC 199527 ||| || ||||||| ||| || || |||||||| | ||| |||||||| ||| ||| || Sbjct 3721 CCTACCGTCTTCCAACTGTTTACCAGCGAAGATCAAACGTTGCTGGTCAGGAGGAATGCC 3662 Query 199528 TTCTCGCTCCTGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAA 199587 |||| || || ||||| || ||| ||| | ||||| | | ||| || || | Sbjct 3661 TTCTTTGTCTTGGATCTTAGCTTTTACGTTTTCTATTGTGTCAGAGGCTTCAACTTCAAG 3602 Query 199588 CGTGATCGTCTTACCCGTGAGAGTTTTCACAAAAATTTG 199626 ||||| || ||||| |||||||||||||| || ||||| Sbjct 3601 GGTGATGGTTTTACCGGTGAGAGTTTTCACGAAGATTTG 3563 Score = 129 bits (142), Expect = 1e-24 Identities = 162/220 (74%), Gaps = 2/220 (1%) Strand=Plus/Minus Query 199408 TCGAAGTCTCAGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGT 199467 |||||| | ||| || || || ||||| || || || |||| ||| ||||| | | || Sbjct 4009 TCGAAGACGCAGAACCAGATGAAGAGTAGATTCTTTCTGGATGTTATAGTCTGAGAGTGT 3950 Query 199468 CCTTCCATCTTCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCC 199527 ||| || ||||||| ||| || || |||||||| | ||| |||||||| ||| ||| || Sbjct 3949 CCTACCGTCTTCCAACTGTTTACCAGCGAAGATCAAACGTTGCTGGTCAGGAGGAATGCC 3890 Query 199528 TTCTCGCTCCTGAATCTTTTGCTTC-ACGGATTCGACGGTGTCTGTTGTTTCTACATCCA 199586 |||| || || || ||| |||| ||| ||| | ||||| | | ||| || || | Sbjct 3889 TTCTTTGTCTTGGAT-TTTAGCTTTTACGTTTTCTATTGTGTCAGAGGCTTCAACTTCAA 3831 Query 199587 ACGTGATCGTCTTACCCGTGAGAGTTTTCACAAAAATTTG 199626 ||||| || ||||| |||||||||||||| || ||||| Sbjct 3830 GAGTGATGGTTTTACCGGTGAGAGTTTTCACGAAGATTTG 3791 Score = 114 bits (126), Expect = 3e-20 Identities = 159/220 (72%), Gaps = 2/220 (1%) Strand=Plus/Minus Query 199408 TCGAAGTCTCAGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGT 199467 |||||| | ||| || || || || || || || ||||| | || || |||| | ||| Sbjct 3553 TCGAAGACGCAGAACCAGATGAAGTGTGGATTCTTTTTGAATATTATAATCAGAGAGAGT 3494 Query 199468 CCTTCCATCTTCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCC 199527 || |||||||| || || || || || || || ||||||||||| ||||| |||||| Sbjct 3493 TCTGCCATCTTCAAGTTGTTTGCCAGCAAAAATCAGACGCTGCTGATCCGGGGGAATTCC 3434 Query 199528 TTCTCGCTCCTGAATCTTTTGC-TTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCA 199586 ||| || || || ||| || ||||| ||| | ||||||| | ||| || || | Sbjct 3433 CTCTTTGTCTTGGAT-TTTGGCTTTCACATTTTCAATAGTGTCTGAAGCTTCGACTTCGA 3375 Query 199587 ACGTGATCGTCTTACCCGTGAGAGTTTTCACAAAAATTTG 199626 ||||| || |||||||| ||||| |||||||| || || Sbjct 3374 GGGTGATGGTTTTACCCGTAAGAGTCTTCACAAAGATCTG 3335 >seq3876 Length=890137 Score = 132 bits (146), Expect = 1e-25 Identities = 148/195 (76%), Gaps = 2/195 (1%) Strand=Plus/Plus Query 199433 GTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATCTTCCAGCTGCTTTCCG 199492 || || |||||||| | ||||||||||| | || | |||||||| ||||| |||||| Sbjct 520636 GTGGATTCCTTTTGAATGTTGTAGTCAGAAAGGGTACGGCCATCTTCAAGCTGTTTTCCG 520695 Query 199493 GCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCGCTCCTGAATCTTTTGC-TT 199551 |||||||| | | ||||||||||||| |||||||| |||||||| |||||| || Sbjct 520696 GCGAAGATCAACCTCTGCTGGTCCGGAGGGATTCCTTCCTTGTCCTGAAT-TTTTGCTTT 520754 Query 199552 CACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTGATCGTCTTACCCGTGAGAGT 199611 |||| || | ||||| | || || || ||||| ||||| ||||| || || | || Sbjct 520755 CACGTTCTCAATCGTGTCAGATGCCTCAACTTCCAATGTGATGGTCTTTCCGGTCAATGT 520814 Query 199612 TTTCACAAAAATTTG 199626 ||| || |||||||| Sbjct 520815 TTTGACGAAAATTTG 520829 Score = 125 bits (138), Expect = 2e-23 Identities = 147/196 (75%), Gaps = 2/196 (1%) Strand=Plus/Plus Query 199432 AGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATCTTCCAGCTGCTTTCC 199491 |||||| ||||| || | ||| || || | | || | || ||||| ||||| ||||| Sbjct 520407 AGTCGATTCCTTCTGAATGTTATAATCTGAAAGTGTGCGACCGTCTTCAAGCTGTTTTCC 520466 Query 199492 GGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCGCTCCTGAATCTTTTGC-T 199550 ||||||||| | | |||||||||||| |||||||| |||||||| |||||| | Sbjct 520467 GGCGAAGATCAACCTCTGCTGGTCCGGGGGGATTCCTTCCTTGTCCTGAAT-TTTTGCTT 520525 Query 199551 TCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTGATCGTCTTACCCGTGAGAG 199610 ||||| || | ||||| | | ||| || |||| ||||| |||||||| ||||| | Sbjct 520526 TCACGTTCTCAATCGTGTCCGACGCTTCGACTTCCAGAGTGATTGTCTTACCGGTGAGCG 520585 Query 199611 TTTTCACAAAAATTTG 199626 |||| ||||||||||| Sbjct 520586 TTTTGACAAAAATTTG 520601 Score = 125 bits (138), Expect = 2e-23 Identities = 150/201 (75%), Gaps = 2/201 (1%) Strand=Plus/Plus Query 199427 TGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATCTTCCAGCTGC 199486 || || || || || ||||| | ||||||||||| | ||| | |||||||| ||||| Sbjct 521086 TGCAGTGTGGATTCTTTTTGAATGTTGTAGTCAGAAAGAGTGCGGCCATCTTCAAGCTGT 521145 Query 199487 TTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCGCTCCTGAATCTTT 199546 |||||||||||||| | | |||||| || ||| ||||||||| || ||||| ||| Sbjct 521146 TTTCCGGCGAAGATCAATCTCTGCTGATCTGGAGGGATTCCTTCTTTGTCTTGAAT-TTT 521204 Query 199547 TGC-TTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTGATCGTCTTACCCGT 199605 ||| || || ||||| ||||| | || || || ||||||||||| || || || || Sbjct 521205 TGCTTTGACATTTTCGATCGTGTCAGATGCCTCGACTTCCAACGTGATGGTTTTTCCGGT 521264 Query 199606 GAGAGTTTTCACAAAAATTTG 199626 | ||||| || |||||||| Sbjct 521265 CAATGTTTTGACGAAAATTTG 521285 Score = 122 bits (134), Expect = 2e-22 Identities = 149/201 (74%), Gaps = 2/201 (1%) Strand=Plus/Plus Query 199427 TGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATCTTCCAGCTGC 199486 || || || || || ||||| | ||||||||||| | ||| | |||||||| ||||| Sbjct 521314 TGCAGTGTGGATTCTTTTTGAATGTTGTAGTCAGAAAGAGTGCGGCCATCTTCAAGCTGT 521373 Query 199487 TTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCGCTCCTGAATCTTT 199546 ||||||||||| || | | |||||| || ||| ||||||||| || ||||| ||| Sbjct 521374 TTTCCGGCGAAAATCAATCTCTGCTGATCTGGAGGGATTCCTTCTTTGTCTTGAAT-TTT 521432 Query 199547 TGC-TTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTGATCGTCTTACCCGT 199605 ||| || || ||||| ||||| | || || || ||||||||||| || || || || Sbjct 521433 TGCTTTGACATTTTCGATCGTGTCAGATGCCTCGACTTCCAACGTGATGGTTTTTCCTGT 521492 Query 199606 GAGAGTTTTCACAAAAATTTG 199626 || ||||| ||||| || || Sbjct 521493 CAGGGTTTTGACAAAGATCTG 521513 Score = 113 bits (124), Expect = 1e-19 Identities = 147/201 (73%), Gaps = 2/201 (1%) Strand=Plus/Plus Query 199427 TGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATCTTCCAGCTGC 199486 || || || || ||||| || | |||||||||| | || | |||||||| ||||| Sbjct 520858 TGCAGTGTGGATTCCTTCTGAATATTGTAGTCAGAAAGTGTGCGGCCATCTTCAAGCTGT 520917 Query 199487 TTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCGCTCCTGAATCTTT 199546 ||||| || ||||| | | ||||| |||||| ||||||||| || ||||| ||| Sbjct 520918 TTTCCAGCAAAGATCAATCTTTGCTGATCCGGAGGGATTCCTTCTTTGTCTTGAAT-TTT 520976 Query 199547 TGCTTC-ACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTGATCGTCTTACCCGT 199605 ||||| || ||||| ||||| | || || || ||||||||||| ||||| || || Sbjct 520977 TGCTTTGACATTTTCGATCGTGTCAGATGCCTCAACTTCCAACGTGATGGTCTTTCCGGT 521036 Query 199606 GAGAGTTTTCACAAAAATTTG 199626 | ||||| || |||||||| Sbjct 521037 CAATGTTTTGACGAAAATTTG 521057 Score = 100 bits (110), Expect = 7e-16 Identities = 150/213 (70%), Gaps = 0/213 (0%) Strand=Plus/Plus Query 199414 TCTCAGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCC 199473 ||| ||||| | |||||||| || ||||| || | ||||| || | || || | ||| Sbjct 521529 TCTGAGGACCAAATGGAGAGTGGATTCCTTCTGAATATTGTAATCGGATAAGGTACGTCC 521588 Query 199474 ATCTTCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCG 199533 ||||| ||||||||||| |||||||| | ||||||||| || || || ||||| Sbjct 521589 GTCTTCAAGCTGCTTTCCAGCGAAGATCAAACGCTGCTGATCGGGTGGGATACCTTCCTT 521648 Query 199534 CTCCTGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTGAT 199593 || || |||||| || || |||| |||||| | | ||| || || | || || Sbjct 521649 ATCTTGGATCTTTGCTTTTACATTCTCGATGGTGTCAGAAGCTTCAACTTCAAGGGTTAT 521708 Query 199594 CGTCTTACCCGTGAGAGTTTTCACAAAAATTTG 199626 ||||| || || | || ||||| ||||| || Sbjct 521709 GGTCTTCCCGGTCAATGTCTTCACGAAAATCTG 521741 Score = 91.5 bits (100), Expect = 3e-13 Identities = 153/219 (70%), Gaps = 2/219 (1%) Strand=Plus/Plus Query 199409 CGAAGTCTCAGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTC 199468 ||||| |||| || | || || || || ||||| || | ||| || |||| | || Sbjct 520156 CGAAGCCTCAAAACTAAATGCAGGGTAGATTCCTTCTGAATGTTATAATCAGAAAGCGTA 520215 Query 199469 CTTCCATCTTCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCT 199528 | || ||||| ||||| |||||||| ||||| | | |||||| || ||| |||||| Sbjct 520216 CGGCCGTCTTCGAGCTGTTTTCCGGCAAAGATCAACCTCTGCTGATCTGGAGGGATTCCT 520275 Query 199529 TCTCGCTCCTGAATCTTTTGCTTC-ACGGATTCGACGGTGTCTGTTGTTTCTACATCCAA 199587 || || ||||| ||| |||| || |||| ||||| | | || || ||||| Sbjct 520276 TCCTTGTCTTGAAT-TTTGGCTTTGACATTCTCGATCGTGTCCGACGCCTCAACTTCCAA 520334 Query 199588 CGTGATCGTCTTACCCGTGAGAGTTTTCACAAAAATTTG 199626 |||||| ||||| || || | || || || |||||||| Sbjct 520335 CGTGATGGTCTTTCCTGTTAATGTCTTGACGAAAATTTG 520373 Score = 84.2 bits (92), Expect = 5e-11 Identities = 79/101 (78%), Gaps = 0/101 (0%) Strand=Plus/Minus Query 200930 AAAAACTTATCTTCGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACG 200989 ||| ||| || ||||| || |||||| | || |||||| ||||||| |||| || || Sbjct 519799 AAAGACTGATTTTCGCGGGCAAGCAGCTAGAGGATGGACGGACTTTATCCGACTATAATA 519740 Query 200990 TCCAGAAAGAGTCTACTCTTCACCTTGTTTTGAGACTTCGA 201030 | |||||||||||||| ||||||||||| | ||||| || Sbjct 519739 TTCAGAAAGAGTCTACACTTCACCTTGTACTTCGACTTAGA 519699 >seq4069 Length=1127261 Score = 104 bits (114), Expect = 6e-17 Identities = 134/185 (72%), Gaps = 0/185 (0%) Strand=Plus/Minus Query 199442 TTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATCTTCCAGCTGCTTTCCGGCGAAGATG 199501 ||||||| || || || | || ||| | |||||| ||||| || || |||||||||||| Sbjct 161735 TTTTGGATATTATAATCGGACAGAGTGCGTCCATCCTCCAGTTGTTTGCCGGCGAAGATG 161676 Query 199502 AGACGCTGCTGGTCCGGAAAAATTCCTTCTCGCTCCTGAATCTTTTGCTTCACGGATTCG 199561 || ||||| || || || |||||| || ||||| ||||| ||| || ||| Sbjct 161675 AGTCGCTGTTGATCTGGCGGAATTCCCTCCTTGTCCTGGATCTTGGCCTTGACATTCTCG 161616 Query 199562 ACGGTGTCTGTTGTTTCTACATCCAACGTGATCGTCTTACCCGTGAGAGTTTTCACAAAA 199621 | ||| || | | ||||| || | ||||| || ||||||||||| |||||||| || Sbjct 161615 ATGGTATCGGAGGCCTCTACCTCGAGGGTGATGGTTTTACCCGTGAGGGTTTTCACGAAG 161556 Query 199622 ATTTG 199626 || || Sbjct 161555 ATCTG 161551 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1178851769894741