Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Trachymyrmex_20zeteki_20[refseq_20GCF_5F001594055.1_202016-03-31]
4,623 sequences; 267,973,152 total letters
Query= NC_013953.1
Length=156344
Score E
Sequences producing significant alignments: (Bits) Value
seq4552 158 1e-33
seq4069 132 5e-26
seq3876 131 2e-25
seq3537 98.7 1e-15
>seq4552
Length=86203
Score = 158 bits (174), Expect = 1e-33
Identities = 174/229 (76%), Gaps = 2/229 (1%)
Strand=Plus/Plus
Query 38243 AATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCAC 38302
||||||||| ||||| ||||| ||||| || |||||||| ||| |||| ||||| || |
Sbjct 4015 AATGCAAATCTTCGTGAAAACTCTCACCGGTAAAACCATTACCCTCGAAGTCGAAGCTTC 4074
Query 38303 CGACAGCGT-GCAAACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACC 38361
|||| | | | ||||| | || | ||||||| ||||||||||||||||| | || |
Sbjct 4075 AGACACCATTGAAAACG-TAAAGGCTAAAATCCAGGACAAAGAGGGAATTCCACCGGATC 4133
Query 38362 AACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACA 38421
||||||| || || | ||| || ||||| ||||| || | | || || ||||||||
Sbjct 4134 AACAGCGTCTGATCTTCGCCGGTAAACAACTGGAAGATGGCAGAACTCTTTCCGACTACA 4193
Query 38422 ACATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCGTTTGAGAGGCGG 38470
|||||||||| ||| | || || || ||||| |||||| | |||| ||
Sbjct 4194 ACATCCAAAAAGAATCCACACTTCACTTGGTTCTGCGTCTTCGAGGAGG 4242
Score = 134 bits (148), Expect = 1e-26
Identities = 171/231 (74%), Gaps = 6/231 (3%)
Strand=Plus/Plus
Query 38243 AATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCAC 38302
||||||||| ||||| ||||| ||||| || |||||||||||| | || || || ||| |
Sbjct 3559 AATGCAAATCTTCGTGAAAACTCTCACCGGTAAAACCATCACCCTTGAAGTTGAAGCCTC 3618
Query 38303 CGACAGCGT-GCAAACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACC 38361
|||| | | ||||| | |||| || |||| |||||||| || ||||| | ||||
Sbjct 3619 TGACACAATAGAAAACG-TAAAAGCTAAGATCCAAGACAAAGAAGGCATTCCTCCTGACC 3677
Query 38362 AACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACG--AGCGCACCCTCAACGACTA 38419
| || || | || | ||| || |||||| |||| |||| || ||| |||| |||||
Sbjct 3678 AGCAACGTTTGATCTTCGCTGGTAAACAGTTGGAAGACGGTAGGACACTCTCA--GACTA 3735
Query 38420 CAACATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCGTTTGAGAGGCGG 38470
|||||||| || ||| | || || ||| |||| |||||| | |||| ||
Sbjct 3736 TAACATCCAGAAAGAATCTACTCTTCATCTGGTTCTGCGTCTTCGAGGAGG 3786
Score = 134 bits (148), Expect = 1e-26
Identities = 171/231 (74%), Gaps = 6/231 (3%)
Strand=Plus/Plus
Query 38243 AATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCAC 38302
||||||||| ||||| ||||| ||||| || ||||||||||| | || || || ||| |
Sbjct 3787 AATGCAAATCTTCGTGAAAACTCTCACCGGTAAAACCATCACTCTTGAAGTTGAAGCCTC 3846
Query 38303 CGACAGCGT-GCAAACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACC 38361
|||| | | ||||| | |||| ||||||| |||||||| || ||||| | ||||
Sbjct 3847 TGACACAATAGAAAACG-TAAAAGCTAAAATCCAAGACAAAGAAGGCATTCCTCCTGACC 3905
Query 38362 AACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACG--AGCGCACCCTCAACGACTA 38419
| || || | || | ||| || |||||| |||| |||| || ||| |||| |||||
Sbjct 3906 AGCAACGTTTGATCTTCGCTGGTAAACAGTTGGAAGACGGTAGGACACTCTCA--GACTA 3963
Query 38420 CAACATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCGTTTGAGAGGCGG 38470
|||||||| || ||| | || || ||| |||| |||||| | |||| ||
Sbjct 3964 TAACATCCAGAAAGAATCTACTCTTCATCTGGTTCTGCGTCTTCGAGGAGG 4014
Score = 125 bits (138), Expect = 7e-24
Identities = 164/227 (72%), Gaps = 0/227 (0%)
Strand=Plus/Plus
Query 38244 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303
||||| || || || || || || ||||| |||||||||||| |||| ||||| || |
Sbjct 3332 ATGCAGATCTTTGTGAAGACTCTTACGGGTAAAACCATCACCCTCGAAGTCGAAGCTTCA 3391
Query 38304 GACAGCGTGCAAACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCAA 38363
|||| | ||| | |||| ||||||| |||||||||||||||||| | || ||
Sbjct 3392 GACACTATTGAAAATGTGAAAGCCAAAATCCAAGACAAAGAGGGAATTCCCCCGGATCAG 3451
Query 38364 CAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAAC 38423
||||| || |||| || |||||||| || || || | | || ||| || || ||
Sbjct 3452 CAGCGTCTGATTTTTGCTGGCAAACAACTTGAAGATGGCAGAACTCTCTCTGATTATAAT 3511
Query 38424 ATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCGTTTGAGAGGCGG 38470
|| ||||| ||| | || || ||| |||| |||||| | |||| ||
Sbjct 3512 ATTCAAAAAGAATCCACACTTCATCTGGTTCTGCGTCTTCGAGGAGG 3558
Score = 107 bits (118), Expect = 2e-18
Identities = 152/211 (72%), Gaps = 2/211 (1%)
Strand=Plus/Plus
Query 38243 AATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCAC 38302
||||||||| || || ||||| ||||| || ||||||||||| | || ||||| || |
Sbjct 4243 AATGCAAATTTTTGTGAAAACTCTCACAGGTAAAACCATCACTCTTGAAGTCGAAGCTTC 4302
Query 38303 CGACA-GCGTGCAAACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACC 38361
|||| || ||||| | || | ||||| | |||||||| ||||| || | || |
Sbjct 4303 AGACACTATTGAAAACG-TGAAGGCCAAAATTCAGGACAAAGAAGGAATCCCTCCAGATC 4361
Query 38362 AACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACA 38421
||||||| | || | ||| ||||| || ||||| |||| | || || || ||||
Sbjct 4362 AACAGCGTTTAATCTTCGCTGGCAAGCAACTGGAAGACGGCAGAACTCTTTCTGATTACA 4421
Query 38422 ACATCCAAAAGGAAGCGACGCTGCATTTGGT 38452
|||||||||| ||| | || || || || ||
Sbjct 4422 ACATCCAAAAAGAATCTACACTCCACTTAGT 4452
Score = 100 bits (110), Expect = 3e-16
Identities = 154/217 (71%), Gaps = 2/217 (1%)
Strand=Plus/Plus
Query 38244 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303
|||||||| || |||||||| ||||| || |||||||||||| | || || || || |
Sbjct 3104 ATGCAAATCTTTGTAAAAACCCTCACTGGGAAAACCATCACCCTTGAGGTGGAAGCTTCT 3163
Query 38304 GACAGCGT-GCAAACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCA 38362
|||| | | |||| | |||| || |||| |||||||| || ||||| | || ||
Sbjct 3164 GACACTATAGAGAACG-TCAAAGCTAAGATCCAAGACAAAGAAGGTATTCCTCCAGATCA 3222
Query 38363 ACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 38422
|| || | || | || || || || || || || | | ||||| ||| |||||
Sbjct 3223 GCAACGTTTAATCTTTGCTGGAAAGCAACTAGAGGATGGCAGAACCCTTTCCGATTACAA 3282
Query 38423 CATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCGT 38459
|||||| |||||| | || || ||| | || ||||||
Sbjct 3283 CATCCAGAAGGAATCTACACTTCATCTTGTTCTGCGT 3319
>seq4069
Length=1127261
Score = 132 bits (146), Expect = 5e-26
Identities = 147/196 (75%), Gaps = 0/196 (0%)
Strand=Plus/Plus
Query 38244 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303
||||| || ||||| ||||| |||||||| |||||||||||| |||| || |||||| ||
Sbjct 161548 ATGCAGATCTTCGTGAAAACCCTCACGGGTAAAACCATCACCCTCGAGGTAGAGGCCTCC 161607
Query 38304 GACAGCGTGCAAACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCAA 38363
|| | | | | | | || | || |||| ||||| ||||||||||| | || |||
Sbjct 161608 GATACCATCGAGAATGTCAAGGCCAAGATCCAGGACAAGGAGGGAATTCCGCCAGATCAA 161667
Query 38364 CAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAAC 38423
||||| ||||| | ||| |||||||| ||||| || | ||||| || ||| || ||
Sbjct 161668 CAGCGACTCATCTTCGCCGGCAAACAACTGGAGGATGGACGCACTCTGTCCGATTATAAT 161727
Query 38424 ATCCAAAAGGAAGCGA 38439
|||||||| | ||||
Sbjct 161728 ATCCAAAAAGGTGCGA 161743
>seq3876
Length=890137
Score = 131 bits (144), Expect = 2e-25
Identities = 162/219 (74%), Gaps = 2/219 (1%)
Strand=Plus/Minus
Query 38244 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303
|||||||| || || ||||||||||| || || || ||||| | || ||||| || |
Sbjct 520604 ATGCAAATTTTTGTCAAAACGCTCACCGGTAAGACAATCACTCTGGAAGTCGAAGCGTCG 520545
Query 38304 GACA-GCGTGCAAACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCA 38362
|||| | || |||| | |||| |||||| | ||||| || ||||| ||| | |||||
Sbjct 520544 GACACGATTGAGAACG-TGAAAGCAAAAATTCAGGACAAGGAAGGAATCCCCCCGGACCA 520486
Query 38363 ACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 38422
||| || | || | ||| || |||||||| || |||| ||||| || || || ||
Sbjct 520485 GCAGAGGTTGATCTTCGCCGGAAAACAGCTTGAAGACGGTCGCACACTTTCAGATTATAA 520426
Query 38423 CATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCGTTT 38461
||| || |||||| |||| |||||||||| || |||||
Sbjct 520425 CATTCAGAAGGAATCGACTTTGCATTTGGTTCTTCGTTT 520387
Score = 129 bits (142), Expect = 6e-25
Identities = 160/219 (73%), Gaps = 0/219 (0%)
Strand=Plus/Minus
Query 38243 AATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCAC 38302
|||||| || || || ||||| || || || ||||||||||| | || |||||||| |
Sbjct 521517 AATGCAGATCTTTGTCAAAACCCTGACAGGAAAAACCATCACGTTGGAAGTCGAGGCATC 521458
Query 38303 CGACAGCGTGCAAACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCA 38362
|||| | ||| | |||| |||||| | |||||||| ||||| || | || ||
Sbjct 521457 TGACACGATCGAAAATGTCAAAGCAAAAATTCAAGACAAAGAAGGAATCCCTCCAGATCA 521398
Query 38363 ACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 38422
||| | | |||| ||| || |||||||| || || | ||||| || ||||||||
Sbjct 521397 GCAGAGATTGATTTTCGCCGGAAAACAGCTTGAAGATGGCCGCACTCTTTCTGACTACAA 521338
Query 38423 CATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCGTTT 38461
||| ||||| ||| | || ||||||||||| || |||||
Sbjct 521337 CATTCAAAAAGAATCCACACTGCATTTGGTTCTCCGTTT 521299
Score = 127 bits (140), Expect = 2e-24
Identities = 159/218 (73%), Gaps = 0/218 (0%)
Strand=Plus/Minus
Query 38244 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303
|||||||| ||||| ||||| | || || ||||||||||| | || |||||||| |
Sbjct 521288 ATGCAAATTTTCGTCAAAACATTGACCGGAAAAACCATCACGTTGGAAGTCGAGGCATCT 521229
Query 38304 GACAGCGTGCAAACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCAA 38363
|||| | ||| | |||| |||||| | |||||||| ||||| || | || ||
Sbjct 521228 GACACGATCGAAAATGTCAAAGCAAAAATTCAAGACAAAGAAGGAATCCCTCCAGATCAG 521169
Query 38364 CAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAAC 38423
||| | | || | ||| || |||||||| || || | ||||| || |||||||||
Sbjct 521168 CAGAGATTGATCTTCGCCGGAAAACAGCTTGAAGATGGCCGCACTCTTTCTGACTACAAC 521109
Query 38424 ATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCGTTT 38461
|| ||||| ||| | || ||||||||||| || |||||
Sbjct 521108 ATTCAAAAAGAATCCACACTGCATTTGGTTCTCCGTTT 521071
Score = 120 bits (132), Expect = 3e-22
Identities = 154/210 (73%), Gaps = 2/210 (1%)
Strand=Plus/Minus
Query 38244 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303
|||||||| ||||| ||||| | || || || |||||||| | || || ||||| |
Sbjct 520832 ATGCAAATTTTCGTCAAAACATTGACCGGAAAGACCATCACATTGGAAGTTGAGGCATCT 520773
Query 38304 GACA-GCGTGCAAACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCA 38362
|||| | || |||| | |||| |||||| | ||||| || ||||| || | |||||
Sbjct 520772 GACACGATTGAGAACG-TGAAAGCAAAAATTCAGGACAAGGAAGGAATCCCTCCGGACCA 520714
Query 38363 ACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 38422
||| || | || | ||| || |||||||| || || | || ||||| ||||||||
Sbjct 520713 GCAGAGGTTGATCTTCGCCGGAAAACAGCTTGAAGATGGCCGTACCCTTTCTGACTACAA 520654
Query 38423 CATCCAAAAGGAAGCGACGCTGCATTTGGT 38452
||| ||||||||| | || ||||||||||
Sbjct 520653 CATTCAAAAGGAATCCACATTGCATTTGGT 520624
Score = 105 bits (116), Expect = 7e-18
Identities = 154/218 (71%), Gaps = 0/218 (0%)
Strand=Plus/Minus
Query 38244 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303
|||||||| ||||| ||||| | || || || |||||||| | || || ||||| |
Sbjct 521060 ATGCAAATTTTCGTCAAAACATTGACCGGAAAGACCATCACGTTGGAAGTTGAGGCATCT 521001
Query 38304 GACAGCGTGCAAACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCAA 38363
|||| | ||| | |||| |||||| | |||||||| ||||| || | || ||
Sbjct 521000 GACACGATCGAAAATGTCAAAGCAAAAATTCAAGACAAAGAAGGAATCCCTCCGGATCAG 520941
Query 38364 CAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAAC 38423
|| | | || | || || |||||||| || || | ||||| || ||||||||
Sbjct 520940 CAAAGATTGATCTTTGCTGGAAAACAGCTTGAAGATGGCCGCACACTTTCTGACTACAAT 520881
Query 38424 ATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCGTTT 38461
|| || |||||| | || ||||||||||| || |||||
Sbjct 520880 ATTCAGAAGGAATCCACACTGCATTTGGTTCTCCGTTT 520843
Score = 93.3 bits (102), Expect = 4e-14
Identities = 148/210 (70%), Gaps = 2/210 (1%)
Strand=Plus/Minus
Query 38244 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303
||||| || || || || || ||||| || ||||| ||||| | || || ||||| |
Sbjct 520148 ATGCAGATTTTTGTCAAGACTCTCACTGGTAAAACTATCACACTGGAGGTTGAGGCTTCG 520089
Query 38304 GACAGCGT-GCAAACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCA 38362
|||| | | ||||| | || | ||||| | || ||||| || ||||| |||| ||
Sbjct 520088 GACACGATCGAAAACG-TGAAGGCGAAAATTCAAGATAAAGAAGGCATTCCTCCCGATCA 520030
Query 38363 ACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 38422
||| || | || | || || |||||||| || |||| || || || || || ||
Sbjct 520029 GCAGAGGTTGATCTTTGCCGGAAAACAGCTCGAAGACGGCCGTACGCTTTCTGATTATAA 519970
Query 38423 CATCCAAAAGGAAGCGACGCTGCATTTGGT 38452
||| || |||||| | || |||||||||||
Sbjct 519969 CATTCAGAAGGAATCTACCCTGCATTTGGT 519940
>seq3537
Length=3457499
Score = 98.7 bits (108), Expect = 1e-15
Identities = 95/122 (78%), Gaps = 0/122 (0%)
Strand=Plus/Minus
Query 132919 TCGTCCCTGGAAATGAGTTCGTTGCTGAAAGTCAAGCCGGGCATGAGGCCGCGTTTTTTG 132978
||||| | || ||||||||||||||||| || | || ||||||| || ||||| ||
Sbjct 3065263 TCGTCTCGCGAGATGAGTTCGTTGCTGAAGGTGAGACCTGGCATGACTCCTCGTTTCTTC 3065204
Query 132979 AGCCAAAATATGGCGGCGAAACTGCCCGAAAAGAAGACGCCCTCGACGGCCGCGAAAGCC 133038
|||||||| ||||| || |||||||| ||||||| |||||||| ||||| || ||
Sbjct 3065203 AGCCAAAAAATGGCTGCAAAACTGCCACTGAAGAAGATACCCTCGACTGCCGCAAATGCG 3065144
Query 133039 AC 133040
||
Sbjct 3065143 AC 3065142
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 500143896264320
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