Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Trachymyrmex_20zeteki_20[refseq_20GCF_5F001594055.1_202016-03-31] 4,623 sequences; 267,973,152 total letters Query= NC_014649.1 Length=1181549 Score E Sequences producing significant alignments: (Bits) Value seq3918 228 6e-54 seq3812 205 7e-47 seq4300 118 8e-21 seq4059 91.5 1e-12 >seq3918 Length=5396348 Score = 228 bits (252), Expect = 6e-54 Identities = 687/1047 (66%), Gaps = 18/1047 (2%) Strand=Plus/Plus Query 517275 TACCATTGGCATCCAAATCAAATGTGACTTCAATTTGAGGGACCCCTCTCTGAGCAGGTG 517334 |||||||||| || | ||| || |||||||| ||||| || || ||||| | || || | Sbjct 2215043 TACCATTGGCGTCGATATCGAAAGTGACTTCGATTTGCGGTACACCTCTAGGCGCCGGAG 2215102 Query 517335 GGATCCCTTCCAAATTAAATGTTCCCAGATTATTATTATCTTTAGTGAATTTTCGTTCAC 517394 | || || || | |||| | || || | ||||||||||| || | || || | Sbjct 2215103 GAATACCCGTCAGCTCAAATTTGCCGAGGATGTTATTATCTTTCGTCATCGCTCTCTCTC 2215162 Query 517395 CCTCGAAAATTTGGATAGTAACTACAGTTTGATTATCTGAATAAGTTGTAAATACTCTGG 517454 ||||| | | |||||| ||| | | |||||| || || || || || || ||||| Sbjct 2215163 CCTCGTAGACCTGGATAAGCACTCCCGGTTGATTGTCGGAGTACGTGGTGAACG-TCTGG 2215221 Query 517455 ATTTTTTACAA-GGAATTGTTGTGTTTCTATCAATAATATTGGTCATAATACCACCTGCT 517513 | | || | || || || ||||| || | || | | ||||||| || || || Sbjct 2215222 GTCTGTTTCGTTGGTATCGTCGTGTTCCTTTTGATCAAGGTAGTCATAACGCCGCCAGCG 2215281 Query 517514 GTTTCTAAACCAAGAGAAAGAGGAGTGACATCAACTAGGACAATATTTTGAAGTTTTTCA 517573 || || | ||| | || | ||||| || || | || | | || ||||| || ||| Sbjct 2215282 GTCTCAATACCCAATGATAACGGAGTCACGTCCAGCAGAAGTAGATCTTGAACTTCCTCA 2215341 Query 517574 TCAGTTTGACCAACAAGAATAGCTGCTTGAATAGCAGCACCATATGCAACAGCTTCATCA 517633 | | || ||||| || || |||| || ||||| || |||||||| || || Sbjct 2215342 GACTTGTCGCCGTGCAGAATGGCCGCCTGAACTGCTGCACCGTAAGCAACAGCCTCGTCC 2215401 Query 517634 GGATTAACAGTTTCATTTAGTTTTTTACCATTGAAAAAAT-TTGAAAGAAGTTGTCTTAC 517692 ||||| | | || || |||| || || || || |||| ||||| || || | | Sbjct 2215402 GGATTGATGGATTTGTTCAGTTCCTTGCCGTTAAAGAAATCTTGAAGTAACTTCTGA-AT 2215460 Query 517693 CTTAGGAATACGAGATGATCCTCCAACTAATACAATTTCATGCACCTGTGATTTATCCAG 517752 || || || | | || || || ||||| || || || || || | |||||||| Sbjct 2215461 TTTTGGTATCCTGGTGGAGCCACCGACTAAAACGATGCTGTGAACTTGAGCTTTATCCAT 2215520 Query 517753 TTTTGAATCCAATAAAACTTTTTCAACGGGTTCAAGACCCGCTCTAAACAAGTCTGAACA 517812 || | ||| | | || || || ||||| ||| |||||||| || | || Sbjct 2215521 CTTCGCATCTCTAAGCGCCTTCTCCACTGGTTCCAGAGTGCTTCTAAACAGATCGGCGCA 2215580 Query 517813 AAGTTCTTCGAATTTAGCTCTAGTAAGAGTGACAT-TATAA-TCAATTCCTTCGAACAAA 517870 || || ||||| | |||||||| || ||| | || || ||||| || || ||||| Sbjct 2215581 GAGCTCCTCGAACCTGGCTCTAGT--GACCGACGTATAGAAGTCAATCCCCTCAAACAAT 2215638 Query 517871 GAATCAACTTCAATCGTAGTTTGAGTCGAAGAAGATAGTGCACGTTTAGCACGTTCACAT 517930 ||||| | ||||| | | || ||||| || | | | || || | || || Sbjct 2215639 GAATCGATCTCAATGCTCGCCTGCGTCGACGAGCTCAACGTTCTCTTCGCTCTCTCGCAA 2215698 Query 517931 GCTGTCCTTAGTCTTCGTAAGG--CTTTTGCTGATTGATTCAAATCTGTTTTATATTTTC 517988 || ||||| || | || | | || ||| || | | ||| |||| | || ||||| | Sbjct 2215699 GCAGTCCTCAGACGTCTCAGAGATCTCTTGTTGCT--ACTCAGATCTTTCTTGTATTTCC 2215756 Query 517989 TCTTGAAATCTTCAACACACCATGTTACAAGACGATTATCAAAATCTTCACCTCCCAATT 518048 | ||||| |||| ||| | | || | || || ||||| || || || || | | Sbjct 2215757 TTTTGAATTCTTGCACAAAGTGATTCACCATTCGGTTGTCAAAGTCCTCGCCACCGAGAT 2215816 Query 518049 TAGTATTTCCTGACGTAGCTCTTACTTGGAAAAGTCCATCTTCAAGAGACAAAAGAGTTA 518108 || | || | ||| | | | || | ||| | ||||| |||| | ||||| | | Sbjct 2215817 GCGTGTCGCCGGCCGTGGATTTCACCTCGAAGATACCATCCTCAATCGTCAAAATCGACA 2215876 Query 518109 CATCATGGGTTCCACCACCCATATCAAAAATAAGTACATTCATTTCTTTGTCTT--GGTT 518166 | ||| ||| |||||||||| ||||||||||| |||||| |||| | || | || Sbjct 2215877 CGTCAAAGGTACCACCACCCAAGTCAAAAATAAGAACATTCTTTTC---GCCTGCAGCTT 2215933 Query 518167 T-TTATCAAGACCATACGCAAAAGCAGCAGCAGTTGGTTCATTAATAATTCTCAAAACAT 518225 | ||||| ||||||||||| | || || || || || || || || ||||| | ||| | Sbjct 2215934 TCTTATCGAGACCATACGCTATCGCGGCGGCTGTAGGCTCGTTTATTATTCTGAGAACGT 2215993 Query 518226 TAAGACCAGCAATTCTTCCTGCATCTTTAGTGGCTTGTCTTTGTGAATCGTTAAAATATG 518285 | || |||||||| || ||||| || || ||||| || || || || || ||||| | Sbjct 2215994 TCAGGCCAGCAATAGCGCCGGCATCCTTTGTCGCTTGCCTCTGAGAGTCATTGAAATAAG 2216053 Query 518286 CAGGAACAGTAATAACGGCATCAGTTA 518312 | || ||||| || ||||||| |||| Sbjct 2216054 CCGGCACAGTGATGACGGCATTTGTTA 2216080 >seq3812 Length=143806 Score = 205 bits (226), Expect = 7e-47 Identities = 715/1102 (65%), Gaps = 22/1102 (2%) Strand=Plus/Minus Query 517214 TTAGTAATAGTAATATTCTTGGATTTGTTTGTTGATTTATCAGCGGCAGTCACATTAAGA 517273 ||||| ||||| || || || |||| || || || || |||| | ||||| || Sbjct 22896 TTAGTGATAGTGATCTTGTTCTCTTTGCCAGTAGACTTGTCCACGGCGGAGACATTGAGG 22837 Query 517274 ATACCATTGGCATCCAAATCAAATGTGACTTCAATTTGAGGGACCCCTCTCTGAGCAGGT 517333 ||||| || ||||| | || || || || ||||| ||||| || || | | || ||| Sbjct 22836 ATACCGTTCGCATCGATGTCGAACGTCACCTCAATCTGAGGAACTCCACGAGGTGCTGGT 22777 Query 517334 GGGATCCCTTCCAAATTAAATGTTCCCAGATTATTATTATCTTTAGTGAATTTTCGTTCA 517393 ||||| || | | ||| | ||||| ||| |||||||| || | || ||| Sbjct 22776 GGGATACCACTAAGCTCGAATTTGCCCAGTAGATTGTTATCTTTGGTCATGGCGCGCTCA 22717 Query 517394 CCCTCGAAAATTTGGATAGTAACTACAGTTTGATTATCTGAATAAGTTGTAAATACTCTG 517453 |||||| | | || || || ||| |||||| || | |||||||||||| |||| Sbjct 22716 CCCTCGTAGACCTGAATCAACACACCAGGTTGATTGTCGGCATAAGTTGTAAA-GGTCTG 22658 Query 517454 -GATTTTTTACAAGGAATTGTTGTGTTTCTATCAATAATATTGGTCATAATACCACCTGC 517512 | | || || || ||||| || || | ||| | |||||| | ||| || || Sbjct 22657 AGTCTGCTTTGTCGGGATGGTTGTATTCCTCTTAATGAGCGCGGTCATGACACCGCCGGC 22598 Query 517513 TGTTTCTAAACCAAGAGAAAGAGGAGTGACATCAACTAGGACAATATTTTGAAGTTTTTC 517572 || || | ||| ||||| || |||||||| |||| ||| | | | ||| | || Sbjct 22597 AGTCTCAATACCCAGAGAGAGCGGAGTGACGTCAAGTAGAAGCAAGTCTTGCA---CCTC 22541 Query 517573 ATCAGTTTGACCA----ACAAGAATAGCTGCTTGAATAGCAGCACCATATGCAACAGCTT 517628 || | || | || |||| ||||| || || | || || |||||||| ||||||| Sbjct 22540 CTCGGATTTATCACCGTGCAAG-ATAGCCGCCTGTACTGCTGCGCCATATGCCACAGCTT 22482 Query 517629 CATCAGGATTAACAGTTTCATTTAGTTTTTTACCATTGAAAAAAT-TTGAAAGAAGTTGT 517687 |||||||||| | || || || || | ||| ||||||||||| | || | || || | Sbjct 22481 CATCAGGATTGATAGATTTGTTGAGCTCTTTGCCATTGAAAAAGTCCTGTAGGAGCTTCT 22422 Query 517688 CTTACCTTAGGAATACGAGATGATCCTCCAACTAATACAATTTCATGCACCTGTGATTTA 517747 | ||| || || || | || ||||| ||||| || || || || | || | ||| Sbjct 22421 -GAATCTTGGGGATTCGTGTAGAGCCTCCGACTAAGACGATATCGTGGATTTGAGCTTTG 22363 Query 517748 TCCAGTTTTGAATCCAATAAAACTTTTTCAACGGGTTCAAGACCCGCTCTAAACAAGTCT 517807 |||| || | || | || || |||||||||||| | | || | || Sbjct 22362 TCCATCTTGGCGTCGCGCAGCGACTTCTCGACGGGTTCAAGAGTACCGCGGAAGAGATCC 22303 Query 517808 GAACAAAGTTCTTCGAATTTAGCTCTAGTAAGAGTGACATTATAATCAATTCCTTCGAAC 517867 | || ||||| ||||| ||||| || | || | | |||| ||||| ||| || Sbjct 22302 GCGCAGAGTTCCTCGAAACGAGCTCGGGTGATAGAGGTGTAGAAATCGATTCCCTCGTAC 22243 Query 517868 AAAGAATCAACTTCAATCGTAGTTTGAGTCGAAGAAGATAGTGCACGTTTAGCACGTTCA 517927 || ||||| | || || | | ||||| || || || || | || || |||||||| Sbjct 22242 AACGAATCGATCTCGATGCTGGCCTGAGTGGAGGATGACAGGGTGCGCTTTGCACGTTCG 22183 Query 517928 CATGCTGTCCTTAGTCTTCGTA-AG-GCTTTTGCT-GATTGATTCAAATCTGTTTTATAT 517984 || || || | ||| | || | || || ||| | || | ||||||| | || ||| Sbjct 22182 CAGGCCGTGCGTAGACGACGAAGAGCGCGTTTATTCGA---AGTCAAATCCTTCTTGTAT 22126 Query 517985 TTTCTCTTGAAATCTTCAACACACCATGTTACAAGACGATTATCAAAATCTTCACCTCCC 518044 || | |||||| |||| ||| | | || | || ||||| || || ||||| ||| Sbjct 22125 TTGCGCTTGAATTCTTGCACAAAGTGATTGACCATGCGGTTATCGAAGTCCTCACCACCC 22066 Query 518045 AATTTAGTATTTCCTGACGTAGCTCTTACTTGGAAAAGTCCATCTTCAAGAGACAAAAGA 518104 | | ||||| ||| | ||| | | || | ||| | |||||||| | || | | Sbjct 22065 AGATGAGTATCTCCAGCCGTGGACTTGACCTCGAAGATACCATCTTCTATAGTTAGGATG 22006 Query 518105 GTTACATCATGGGTTCCACCACCCATATCAAAAATAAGTACATTCATTTCTTTGTCTTGG 518164 | || || || |||||||| | |||||| ||||| || || | || ||| Sbjct 22005 GACACGTCGAAAGTGCCACCACCGAGATCAAAGATAAGGACGTT--TCGCTCGCCGGTGG 21948 Query 518165 --TTTTTATCAAGACCATACGCAAAAGCAGCAGCAGTTGGTTCATTAATAATTCTCAAAA 518222 || || || ||||| || |||| || || || || || || || ||||| | ||| | Sbjct 21947 CCTTCTTGTCGAGACCGTATGCAATCGCGGCGGCGGTGGGCTCGTTGATAATACGCAATA 21888 Query 518223 CATTAAGACCAGCAATTCTTCCTGCATCTTTAGTGGCTTGTCTTTGTGAATCGTTAAAAT 518282 | || | ||| | || | || || || || || || || | || || ||||| || | Sbjct 21887 CGTTCAAACCCGAGATGGTACCAGCGTCCTTGGTTGCCTGACGCTGCGAGTCGTTGAAGT 21828 Query 518283 ATGCAGGAACAGTAATAACGGC 518304 | || || || || || || || Sbjct 21827 AAGCGGGGACGGTGATCACAGC 21806 >seq4300 Length=3477374 Score = 118 bits (130), Expect = 8e-21 Identities = 122/160 (76%), Gaps = 0/160 (0%) Strand=Plus/Plus Query 518155 TTTGTCTTGGTTTTTATCAAGACCATACGCAAAAGCAGCAGCAGTTGGTTCATTAATAAT 518214 ||| |||| | |||||| | || || |||| ||||| ||||||||||||||||| | Sbjct 1327236 TTTATCTTCTTGTTTATCCATTCCGTAAGCAAGTGCAGCTGCAGTTGGTTCATTAATTAC 1327295 Query 518215 TCTCAAAACATTAAGACCAGCAATTCTTCCTGCATCTTTAGTGGCTTGTCTTTGTGAATC 518274 | | ||| || | |||||||| || |||||||| || ||||||| ||||||||| Sbjct 1327296 ACGAAGAACGTTCAATCCAGCAATCTGACCAGCATCTTTTGTTGCTTGTCGTTGTGAATC 1327355 Query 518275 GTTAAAATATGCAGGAACAGTAATAACGGCATCAGTTACT 518314 |||||||| || || ||||||||||| |||| ||||| Sbjct 1327356 ATTAAAATACGCTGGTACAGTAATAACAGCATTCTTTACT 1327395 Score = 116 bits (128), Expect = 3e-20 Identities = 106/134 (79%), Gaps = 0/134 (0%) Strand=Plus/Plus Query 322244 CCGTATGCAAGAGCTGCTGCAGTTGGTTCATTAATTATTTTAAGAACATCTAAACCCGCA 322303 ||||| ||||| || |||||||||||||||||||||| |||||| | || || ||| Sbjct 1327258 CCGTAAGCAAGTGCAGCTGCAGTTGGTTCATTAATTACACGAAGAACGTTCAATCCAGCA 1327317 Query 322304 ATTTTAGCAGAATCAAGAGTTGCTTGTCTCTGTGCGTCATTAAAATATGCTGGTACAGTA 322363 || | | ||| ||| |||||||||| |||| ||||||||||| |||||||||||| Sbjct 1327318 ATCTGACCAGCATCTTTTGTTGCTTGTCGTTGTGAATCATTAAAATACGCTGGTACAGTA 1327377 Query 322364 ATAACTGCTTTATT 322377 ||||| || || || Sbjct 1327378 ATAACAGCATTCTT 1327391 >seq4059 Length=1225554 Score = 91.5 bits (100), Expect = 1e-12 Identities = 105/139 (76%), Gaps = 2/139 (1%) Strand=Plus/Plus Query 668854 AGGTAAAGAAGGTCGTATTAGAGGAAATTTGATGGGAAAACGTGTCGATATGTCTGCACG 668913 ||| || ||||| | ||| | |||||| ||||||| |||||||| || | ||||| || Sbjct 1020338 AGGAAAGGAAGGCAGGATTCGTGGAAATCTGATGGGTAAACGTGTGGACTTCTCTGCGCG 1020397 Query 668914 TACAGTTATTACTTCTGATCCCAATATTGC-TCTCAATGAAGTTGGTGTTCCTCTTATTA 668972 ||| ||||| ||| ||||||||||| |||| | || || |||| || || || | | || Sbjct 1020398 TACTGTTATCACTCCTGATCCCAAT-TTGCGTATCGATCAAGTAGGCGTACCACGCAGTA 1020456 Query 668973 TTGCTAAAAATCTTACTTT 668991 | || ||||||| || || Sbjct 1020457 TAGCGCAAAATCTGACATT 1020475 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 3780592991511838