Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Trachymyrmex_20zeteki_20[refseq_20GCF_5F001594055.1_202016-03-31] 4,623 sequences; 267,973,152 total letters Query= NC_014765.1 Length=198519 Score E Sequences producing significant alignments: (Bits) Value seq3812 349 4e-91 seq3918 277 2e-69 seq4300 91.5 2e-13 seq2921 91.5 2e-13 seq4212 87.8 2e-12 >seq3812 Length=143806 Score = 349 bits (386), Expect = 4e-91 Identities = 879/1316 (67%), Gaps = 30/1316 (2%) Strand=Plus/Minus Query 6497 TCGACCGTTCCTTTCAT-TTGATAACAGTAGTTTTCGAGACCATTCTTCGCCTCGACCTT 6555 ||||| || | ||||| |||| | ||||| |||||||| ||||| || || | | Sbjct 23043 TCGACTGTGCTCTTCATGTTGA-AGCAGTAAGACTCGAGACCGTTCTTGGCAGAGATCGT 22985 Query 6556 TTTCGCGTACTTTTCATCTTCATCTTTATACTTTTCCGCATCTTGGACCATCTTTTCAAT 6615 || | | ||| || || ||| || || || || || | ||||| ||||||| Sbjct 22984 TTCCTTCTGCTTCTCGTCCTCACTGCGGTATTTCTCTGCCTCGTTCACCATTCTTTCAAT 22925 Query 6616 GTCTTCTTTCGATAA-TCTCCCCTTATCATTCGTAATCGTAATCTTTTCGGATTTACCCG 6674 || || || | ||| || ||||| || || || || || ||||| | ||| || | Sbjct 22924 ATCCTCCTT-GCTAAGTCGACCCTTGTCGTTAGTGATAGTGATCTTGTTCTCTTTGCCAG 22866 Query 6675 AGGCCTTATCTTCAGCACTTACATTCAAAATACCATTTGCATCAACATCGAACCTTACAT 6734 | ||| || | || ||||| | ||||| || ||||| | |||||| | || | Sbjct 22865 TAGACTTGTCCACGGCGGAGACATTGAGGATACCGTTCGCATCGATGTCGAACGTCACCT 22806 Query 6735 TAATTTGTGGTGTACCCCTCGGTGCGGCTGGAATACCCGTTAAATCAAATGTACCAAGTA 6794 ||| || || || | ||||| | ||| ||||| | | || ||| | || |||| Sbjct 22805 CAATCTGAGGAACTCCACGAGGTGCTGGTGGGATACCACTAAGCTCGAATTTGCCCAGTA 22746 Query 6795 AACTGTTATCCGTCGCCTTCTTACGTTCACCTTCATAGACTTTAATTGTCACCGCAGGTT 6854 | ||||||| | | | | || ||||| || ||||| | ||| ||| |||||| Sbjct 22745 GATTGTTATCTTTGGTCATGGCGCGCTCACCCTCGTAGACCTGAATCAACACACCAGGTT 22686 Query 6855 GATTATCTTGTGCCGTTGAGAAGATTTGTTCTTTCTTAGATGGAATCGTCGTATTTCTCG 6914 |||| || |||| ||| | || | ||| | || || || ||||| ||| Sbjct 22685 GATTGTCGGCATAAGTTGTAAAGGTCTGAGTCTGCTTTGTCGGGATGGTTGTATTCCTCT 22626 Query 6915 GAATAACCGGGGTCATAATACCACCCATAGTTTCGAGTCCAAGAGACAGAGGTGTCACGT 6974 ||| | || |||||| | ||| || ||| || | || ||||| || || || |||| Sbjct 22625 TAATGAGCGCGGTCATGACACCGCCGGCAGTCTCAATACCCAGAGAGAGCGGAGTGACGT 22566 Query 6975 CCAAGAGTAACAGGTCTTGAACAGATTCGTTCCCTTCACCCGTTAAGATGGCGGCTTGGA 7034 | | || | || |||||| || ||| ||||| ||||| || || || | Sbjct 22565 CAAGTAGAAGCAAGTCTTGCACCTCCTCGGATTTATCACCGTGCAAGATAGCCGCCTGTA 22506 Query 7035 CCGTCGCCCCGTATGCGACCGCCTCATCGGGGTTAATCGTTTTATTCAGTTCTTTACCGT 7094 | | || || ||||| || || ||||| || || || | ||| || || ||||| || | Sbjct 22505 CTGCTGCGCCATATGCCACAGCTTCATCAGGATTGATAGATTTGTTGAGCTCTTTGCCAT 22446 Query 7095 TAAAATAATCCGATAACATTTGTTGAATTTTCGGGATTCGTGTCGATCCACCGACCAAAA 7154 | ||| | ||| || | | ||||| || ||||||||||| || || ||||| || | Sbjct 22445 TGAAAAAGTCCTGTAGGAGCTTCTGAATCTTGGGGATTCGTGTAGAGCCTCCGACTAAGA 22386 Query 7155 CGATTTCATTCACTTTCGATTTATCGATCTTTGAGTCTCGAAGTGTTTTTTCGACAGGTT 7214 |||| || | | || | ||| || ||||| | ||| || || | || ||||| |||| Sbjct 22385 CGATATCGTGGATTTGAGCTTTGTCCATCTTGGCGTCGCGCAGCGACTTCTCGACGGGTT 22326 Query 7215 CCATACATTTACGGAACAAGTCCATACACAGTTCCTCAAAACGTGCACGGGTAATGGATG 7274 | | | ||||| | ||| || |||||||| ||||| || ||||| || || | Sbjct 22325 CAAGAGTACCGCGGAAGAGATCCGCGCAGAGTTCCTCGAAACGAGCTCGGGTGATAGAGG 22266 Query 7275 TATAGAAATCAACGCCGTCGTATAACGAATCAATTTCAATGGTTGTTTGTGCCGTCGAAG 7334 | |||||||| | || ||||| |||||||| || || ||| | | || | | || | Sbjct 22265 TGTAGAAATCGATTCCCTCGTACAACGAATCGATCTCGATGCTGGCCTGAGTGGAGGATG 22206 Query 7335 ATAACGTTCGCTTTGCGCGCTCACACGCCGTTCGTAAACGACGAAGGGCACGCGGGTTAC 7394 | | || |||||||| || || || ||||| |||| ||||||||| || | | ||| Sbjct 22205 ACAGGGTGCGCTTTGCACGTTCGCAGGCCGTGCGTAGACGACGAAGAGCGC---GTTTAT 22149 Query 7395 CGGAA---ATATCTTTCTTATGTTTACGTTTAAACTCTT-CAGAGAAGTG-TCGA--AGG 7447 ||| | ||| ||||| | ||| || || || |||| || | ||||| | || | | Sbjct 22148 TCGAAGTCAAATCCTTCTTGTATTTGCGCTTGAATTCTTGCACA-AAGTGATTGACCATG 22090 Query 7448 AGTCTCGAATCGAAATCTTCACCACCCAAGTGTGTATCCCCCGCGGTCGCTTTGACTTCA 7507 | | |||||| || |||||||||| || ||||| || || || | ||||| || Sbjct 22089 CGGTT---ATCGAAGTCCTCACCACCCAGATGAGTATCTCCAGCCGTGGACTTGACCTCG 22033 Query 7508 AAGATACCTCCTTCAATGTTTAACAACGAAACATCAAACGTACCACCACCCAGGTCAAAA 7567 |||||||| |||| || ||| | || || || || || |||||||| || ||||| Sbjct 22032 AAGATACCATCTTCTATAGTTAGGATGGACACGTCGAAAGTGCCACCACCGAGATCAAAG 21973 Query 7568 ATGAGTACGTTCGTATCG-TCGTCTTTG---TTCTTATCGAGACCGTACGCGATAGCCGC 7623 || || ||||| ||| ||| | || ||||| ||||||||||| || || || || Sbjct 21972 ATAAGGACGTT----TCGCTCGCCGGTGGCCTTCTTGTCGAGACCGTATGCAATCGCGGC 21917 Query 7624 CGCCGTTGGTTCATTAATAATACG-AAGACAGTTCAGGCCAGCAATAGTTGCCGCATCTT 7682 || || || || || |||||||| || || ||||| || | || || | || || | Sbjct 21916 GGCGGTGGGCTCGTTGATAATACGCAATAC-GTTCAAACCCGAGATGGTACCAGCGTCCT 21858 Query 7683 TCGTCGCTTGTCGTTGCGAATCGTTAAAGTAGGCCGGGACCGTTACGACCGCGTCCGTGA 7742 | || || || || ||||| ||||| ||||| || ||||| || | || |||| |||| Sbjct 21857 TGGTTGCCTGACGCTGCGAGTCGTTGAAGTAAGCGGGGACGGTGATCACAGCGTTGGTGA 21798 Query 7743 CTTTCTTACCGAGATACGATTCCGCGATATCTTTCA-TTTTGGTAAGAACCATCGA 7797 | |||| || | || | || || | || |||| |||| |||| |||||||| Sbjct 21797 CAGTCTTGCCTAAGTATGCCTCTGCAGTCTCCTTCATTTTTACTAAG-ACCATCGA 21743 Score = 114 bits (126), Expect = 2e-20 Identities = 140/188 (74%), Gaps = 5/188 (3%) Strand=Plus/Minus Query 7958 AAAACTGTGTTTTTGGGGTTCATGGCTGTTTGGTTCTTCGCCGCGTCCCCGATAAGACGT 8017 |||| ||||| |||||||||||||| ||||||||| || ||||| ||||| ||||| Sbjct 18418 AAAATGGTGTTGTTGGGGTTCATGGCGACTTGGTTCTTGGCGGCGTCTCCGATGAGACGC 18359 Query 8018 TCATTATTTTCCGTAAACGCGACGTACGATGGG-GTCGTTCGATTCCCTTGGTCGTTCGC 8076 || ||||||| || || || || | |||| ||||| || || || || ||||| || Sbjct 18358 TC---GGTTTCCGTGAAGGCCACATA-GCTGGGCGTCGTGCGGTTACCCTGATCGTTGGC 18303 Query 8077 AATAATTTCTACGCGGTCGTTTTGCCAGACGCCGACGCACGAATACGTTGTTCCTAAATC 8136 || || || || | ||| ||| ||||||| ||||| || || ||||| || | ||| Sbjct 18302 GATGATCTCGACCTTGCCGTGTTGGAAGACGCCAACGCAGGAGTAAGTTGTGCCAAGATC 18243 Query 8137 AATACCGA 8144 ||||||| Sbjct 18242 GATACCGA 18235 >seq3918 Length=5396348 Score = 277 bits (306), Expect = 2e-69 Identities = 737/1113 (66%), Gaps = 16/1113 (1%) Strand=Plus/Plus Query 6705 TACCATTTGCATCAACATCGAACCTTACATTAATTTGTGGTGTACCCCTCGGTGCGGCTG 6764 ||||||| || || | |||||| | || | ||||| ||| ||| || || || | | Sbjct 2215043 TACCATTGGCGTCGATATCGAAAGTGACTTCGATTTGCGGTACACCTCTAGGCGCCGGAG 2215102 Query 6765 GAATACCCGTTAAATCAAATGTACCAAGTAAACTGTTATCCGTCGCCTTCTTACGTTCAC 6824 |||||||||| | |||||| | || || | | ||||| ||| | || | || | Sbjct 2215103 GAATACCCGTCAGCTCAAATTTGCCGAGGATGTTATTATCTTTCGTCATCGCTCTCTCTC 2215162 Query 6825 CTTCATAGACTTTAATTGTCACCGCAGGTTGATTATCTTGTGCCGTTGAGAAGATTTGT- 6883 | || ||||| | || ||| | |||||||| || ||| | ||| | || Sbjct 2215163 CCTCGTAGACCTGGATAAGCACTCCCGGTTGATTGTCGGAGTACGTGGTGAACGTCTGGG 2215222 Query 6884 TCTTTCTTAGATGGAATCGTCGTATTTCTCGGAATAACCGGGGTCATAATACCACCCATA 6943 ||| | || | ||| |||||||| || || || | | ||||||| || || Sbjct 2215223 TCTGT-TTCGTTGGTATCGTCGTGTTCCTTTTGATCAAGGTAGTCATAACGCCGCCAGCG 2215281 Query 6944 GTTTCGAGTCCAAGAGACAGAGGTGTCACGTCCAAGAGTAACAGGTCTTGAACAGATTCG 7003 || || | || | || | || |||||||||| || | || |||||||| ||| Sbjct 2215282 GTCTCAATACCCAATGATAACGGAGTCACGTCCAGCAGAAGTAGATCTTGAAC---TTCC 2215338 Query 7004 TTCC-CTTCAC-CCGTTAAGA-TGGCGGCTTGGACCGTCGCCCCGTATGCGACCGCCTCA 7060 | ||| | |||| ||| |||| || || || | || ||||| || || ||||| Sbjct 2215339 TCAGACTTGTCGCCGTGCAGAATGGCCGCCTGAACTGCTGCACCGTAAGCAACAGCCTCG 2215398 Query 7061 TCGGGGTTAATCGTTTTATTCAGTTCTTTACCGTTAAAATAATCC-GA--TAACATTTGT 7117 || || || || | ||| |||||||| || |||||||| |||| || |||| | || Sbjct 2215399 TCCGGATTGATGGATTTGTTCAGTTCCTTGCCGTTAAAGAAATCTTGAAGTAACTTCTG- 2215457 Query 7118 TGAATTTTCGGGATTCGTGTCGATCCACCGACCAAAACGATTTCATTCACTTTCGATTTA 7177 |||||| || || | || || |||||||| |||||||| | |||| | |||| Sbjct 2215458 --AATTTTTGGTATCCTGGTGGAGCCACCGACTAAAACGATGCTGTGAACTTGAGCTTTA 2215515 Query 7178 TCGATCTTTGAGTCTCGAAGTGTTTTTTCGACAGGTTCCATACATTTACGGAACAAGTCC 7237 || ||||| | |||| ||| | || || || ||||||| | | | |||| || Sbjct 2215516 TCCATCTTCGCATCTCTAAGCGCCTTCTCCACTGGTTCCAGAGTGCTTCTAAACAGATCG 2215575 Query 7238 ATACACAGTTCCTCAAAACGTGCACGGGTAATGGATGTATAGAAATCAACGCCGTCGTAT 7297 || || ||||| || | || | || | || |||||||| |||| || || | Sbjct 2215576 GCGCAGAGCTCCTCGAACCTGGCTCTAGTGACCGACGTATAGAAGTCAATCCCCTCAAAC 2215635 Query 7298 AACGAATCAATTTCAATGGTTGTTTGTGCCGTCGAAGATAACGTTCGCTTTGCGCGCTCA 7357 || ||||| || |||||| | | || | || ||| ||||||| ||| || | ||| Sbjct 2215636 AATGAATCGATCTCAATGCTCGCCTGCGTCGACGAGCTCAACGTTCTCTTCGCTCTCTCG 2215695 Query 7358 CACGCCGTTCGTAAACGACGAAGGGCACGCGGGTTACCGGAAATATCTTTCTTATGTTTA 7417 || || || | | ||| | || | | | ||| | | ||||||||| | ||| Sbjct 2215696 CAAGCAGTCCTCAGACGTCTCAGAGATCTCTTGTTGCTACTCAGATCTTTCTTGTATTTC 2215755 Query 7418 CGTTTAAACTCTT-CAGAGAAGTGTCGAAGGAGTCTCGAATCGAAATCTTCACCACCCAA 7476 | ||| || |||| || | ||||| | | || || || || || ||||| | Sbjct 2215756 CTTTTGAATTCTTGCACA-AAGTGATTCACCATTCGGTTGTCAAAGTCCTCGCCACCGAG 2215814 Query 7477 GTGTGTATCCCCCGCGGTCGCTTTGACTTCAAAGATACCTCCTTCAATGTTTAACAACGA 7536 || || || || || || | ||| || || |||||||| | ||||| | || | ||| Sbjct 2215815 ATGCGTGTCGCCGGCCGTGGATTTCACCTCGAAGATACCATCCTCAATCGTCAAAATCGA 2215874 Query 7537 AACATCAAACGTACCACCACCCAGGTCAAAAATGAGTACGTTCGTATCGTCGTCTTTGTT 7596 || ||||| ||||||||||||| ||||||||| || || ||| | ||| | | || Sbjct 2215875 CACGTCAAAGGTACCACCACCCAAGTCAAAAATAAGAACATTCTTTTCGCCTGCAGCTTT 2215934 Query 7597 CTTATCGAGACCGTACGCGATAGCCGCCGCCGTTGGTTCATTAATAATACGAAGACAGTT 7656 |||||||||||| ||||| || || || || || || || || || || | ||| ||| Sbjct 2215935 CTTATCGAGACCATACGCTATCGCGGCGGCTGTAGGCTCGTTTATTATTCTGAGAACGTT 2215994 Query 7657 CAGGCCAGCAATAGTTGCCGCATCTTTCGTCGCTTGTCGTTGCGAATCGTTAAAGTAGGC 7716 |||||||||||||| | ||||| || |||||||| | || || || || || || || Sbjct 2215995 CAGGCCAGCAATAGCGCCGGCATCCTTTGTCGCTTGCCTCTGAGAGTCATTGAAATAAGC 2216054 Query 7717 CGGGACCGTTACGACCGCGTCCGTGACTTTCTTACCGAGATACGATTCCGCGATATCTTT 7776 ||| || || | ||| || | || | |||| || ||||| | ||||| | || || Sbjct 2216055 CGGCACAGTGATGACGGCATTTGTTATAGTCTTGCCCAGATATGCCTCCGCCGTCTCCTT 2216114 Query 7777 CATTTTGGTAAGAACCATCGATGAAATCTCTTC 7809 ||| || || | ||||| || || | ||| || Sbjct 2216115 CATCTTCGTCAAGACCATAGAGGACACCTCCTC 2216147 Score = 93.3 bits (102), Expect = 5e-14 Identities = 85/106 (80%), Gaps = 1/106 (1%) Strand=Plus/Plus Query 22431 AAAAACGTGTAAA-TTTTATCAGGCATCTACATCAGAGCTCTACGGTAAAGTAAATGAAA 22489 ||||| |||||| |||||||| ||||| || || || || ||||| ||||||| ||| Sbjct 1061764 AAAAATCTGTAAAATTTTATCATGCATCAACGTCCGAACTTTACGGCAAAGTAATGGAAG 1061823 Query 22490 CTCCACAAAATGAAAATACACCGTTTTACCCGCGTTCACCATATGG 22535 |||||||| |||||| ||||| ||||| || || || |||||||| Sbjct 1061824 TTCCACAAACTGAAAAGACACCATTTTATCCACGCTCTCCATATGG 1061869 >seq4300 Length=3477374 Score = 91.5 bits (100), Expect = 2e-13 Identities = 97/128 (76%), Gaps = 0/128 (0%) Strand=Plus/Plus Query 7598 TTATCGAGACCGTACGCGATAGCCGCCGCCGTTGGTTCATTAATAATACGAAGACAGTTC 7657 ||||| | ||||| || | || || || |||||||||||||| | ||||||| |||| Sbjct 1327249 TTATCCATTCCGTAAGCAAGTGCAGCTGCAGTTGGTTCATTAATTACACGAAGAACGTTC 1327308 Query 7658 AGGCCAGCAATAGTTGCCGCATCTTTCGTCGCTTGTCGTTGCGAATCGTTAAAGTAGGCC 7717 | |||||||| | |||||||| || ||||||||||| ||||| ||||| || || Sbjct 1327309 AATCCAGCAATCTGACCAGCATCTTTTGTTGCTTGTCGTTGTGAATCATTAAAATACGCT 1327368 Query 7718 GGGACCGT 7725 || || || Sbjct 1327369 GGTACAGT 1327376 >seq2921 Length=666262 Score = 91.5 bits (100), Expect = 2e-13 Identities = 146/210 (70%), Gaps = 0/210 (0%) Strand=Plus/Plus Query 6637 CTTATCATTCGTAATCGTAATCTTTTCGGATTTACCCGAGGCCTTATCTTCAGCACTTAC 6696 || |||||||||||| ||||| ||| || || | | |||| |||||||| ||| Sbjct 148124 CTGATCATTCGTAATGACGATCTTCTCGCGATTGCCAGTGCCCTTGTCTTCAGCCGATAC 148183 Query 6697 ATTCAAAATACCATTTGCATCAACATCGAACCTTACATTAATTTGTGGTGTACCCCTCGG 6756 | || |||||| || || || | ||||| | || | ||||||||| | || | || Sbjct 148184 TTGCAGAATACCGTTGGCGTCGATTTCGAAGGTGACTTCGATTTGTGGTATGCCACGTGG 148243 Query 6757 TGCGGCTGGAATACCCGTTAAATCAAATGTACCAAGTAAACTGTTATCCGTCGCCTTCTT 6816 || | ||||||||| || | |||||| | ||||| | | ||||||| | | | | Sbjct 148244 CGCCGGTGGAATACCAGTCAGATCAAACTTGCCAAGCAGATGGTTATCCTTGGTCATAGG 148303 Query 6817 ACGTTCACCTTCATAGACTTTAATTGTCAC 6846 ||||||||| || || || | ||| || || Sbjct 148304 ACGTTCACCCTCGTACACCTGAATCGTGAC 148333 Score = 84.2 bits (92), Expect = 3e-11 Identities = 164/239 (69%), Gaps = 5/239 (2%) Strand=Plus/Plus Query 7456 ATCGAAATCTTCACCACCCAAGTGTGTATCCCCCGCGGTCGCTTTGACTTCAAAGATACC 7515 |||||||||||| || || || || || || || || || ||||||||| | ||| Sbjct 149191 ATCGAAATCTTCGCCTCCTAAATGAGTGTCGCCATTAGTGGCAACGACTTCAAATACACC 149250 Query 7516 TCCTTCAATGTTTAACAACGAAACATCAAACGTACCACCACCCAGGTCAAAAATGAGTAC 7575 || || | | ||| || ||||| || || |||||||||||||| | ||||| Sbjct 149251 ATTATCGATAGTGAGCAAACTGACGTCAAAGGTGCCGCCACCCAGGTCAAACACCAGTAC 149310 Query 7576 GTTCGTATCGTCGTCTTTGTTCTTATCGAGACCGTACGCGATAGCCGCCGCCGTTGGTTC 7635 ||| | ||| ||||| ||||| || | ||| || || || || || || || || || Sbjct 149311 GTTTTTCTCGCCGTCT---TTCTTGTCCAAACCATATGCAATTGCAGCGGCAGTCGGCTC 149367 Query 7636 ATTAATAATAC-GAAGACAGTTCAGGCCAGCAATAGTTGCCGCATCTTTCGTCGCTTGT 7693 || ||||| | | ||| || ||||| ||| ||| | ||||| || || || ||| Sbjct 149368 GTTGATAATTCTCATTACA-ACCAAGCCAGAAATTGTTCCAGCATCCTTGGTGGCCTGT 149425 >seq4212 Length=4365329 Score = 87.8 bits (96), Expect = 2e-12 Identities = 89/116 (77%), Gaps = 0/116 (0%) Strand=Plus/Minus Query 104668 TTTACGACGACAAATTCACCCGCGAGTGTTCGTCTCAAATAGATATTGGTCGTATACGGT 104727 || || | || |||||| |||| | | || |||| |||||||||| | ||||| ||| Sbjct 3416241 TTGACAATGATAAATTCTCCCGACAATACACGCCTCACATAGATATTGCTTGTATATGGT 3416182 Query 104728 TCGAAACACTCGTTGTTCCCTAAAATCTGGGATGTGGATGCGGTAGGCATAGGTGC 104783 || | | | ||||| |||||||||||||| | ||| || || || ||||||||||| Sbjct 3416181 TCAATAGATTCGTTATTCCCTAAAATCTGTGCTGTCGAGGCCGTTGGCATAGGTGC 3416126 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 635096097263320