Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Trachymyrmex_20zeteki_20[refseq_20GCF_5F001594055.1_202016-03-31]
4,623 sequences; 267,973,152 total letters
Query= NC_015326.1
Length=346754
Score E
Sequences producing significant alignments: (Bits) Value
seq4552 188 2e-42
seq3876 154 3e-32
>seq4552
Length=86203
Score = 188 bits (208), Expect = 2e-42
Identities = 170/214 (79%), Gaps = 0/214 (0%)
Strand=Plus/Minus
Query 194928 CAAAACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATC 194987
|| ||| | |||||| ||||| |||||||| || ||||| |||| ||||||||| |||||
Sbjct 4228 CAGAACCAAGTGAAGTGTGGATTCTTTTTGGATGTTGTAGTCGGAAAGAGTTCTGCCATC 4169
Query 194988 TTCGAGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTC 195047
||| || || ||||| |||||||| || || ||||| || || ||||| || ||||||||
Sbjct 4168 TTCCAGTTGTTTACCGGCGAAGATCAGACGCTGTTGATCCGGTGGAATTCCCTCTTTGTC 4109
Query 195048 TTGAATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTAACCGT 195107
|| ||||| ||| ||||| ||||||||||| ||| ||| ||||| ||||||| ||
Sbjct 4108 CTGGATTTTAGCCTTTACGTTTTCAATGGTGTCTGAAGCTTCGACTTCGAGGGTAATGGT 4049
Query 195108 CTTTCCTGTCAAAGTTTTTACGAACACTTGCATT 195141
|| || || | |||||| ||||| | |||||||
Sbjct 4048 TTTACCGGTGAGAGTTTTCACGAAGATTTGCATT 4015
Score = 179 bits (198), Expect = 8e-40
Identities = 171/219 (78%), Gaps = 0/219 (0%)
Strand=Plus/Minus
Query 194923 AGTCTCAAAACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTC 194982
|||| ||||| | ||| || || || |||||||| || |||||||| | |||||||||
Sbjct 4461 AGTCGTAAAACTAAGTGGAGTGTAGATTCTTTTTGGATGTTGTAATCAGAAAGAGTTCTG 4402
Query 194983 CCATCTTCGAGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCT 195042
|| ||||| || ||||| || |||||||| | || ||||| |||||||| || ||||||
Sbjct 4401 CCGTCTTCCAGTTGCTTGCCAGCGAAGATTAAACGCTGTTGATCTGGAGGGATTCCTTCT 4342
Query 195043 TTGTCTTGAATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTA 195102
||||| |||||||| ||| ||||| ||||| ||||| ||| ||| |||||||| ||
Sbjct 4341 TTGTCCTGAATTTTGGCCTTCACGTTTTCAATAGTGTCTGAAGCTTCGACTTCAAGAGTG 4282
Query 195103 ACCGTCTTTCCTGTCAAAGTTTTTACGAACACTTGCATT 195141
| || || ||||| | |||||| || || | |||||||
Sbjct 4281 ATGGTTTTACCTGTGAGAGTTTTCACAAAAATTTGCATT 4243
Score = 168 bits (186), Expect = 1e-36
Identities = 165/213 (77%), Gaps = 0/213 (0%)
Strand=Plus/Minus
Query 194928 CAAAACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATC 194987
|| |||||| ||||| || || || || || || |||||||||| ||| ||||| |||||
Sbjct 3316 CAGAACAAGATGAAGTGTAGATTCCTTCTGGATGTTGTAATCGGAAAGGGTTCTGCCATC 3257
Query 194988 TTCGAGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTC 195047
|| || ||||| || || ||||| | ||||| || ||||||||||| |||||||||||
Sbjct 3256 CTCTAGTTGCTTTCCAGCAAAGATTAAACGTTGCTGATCTGGAGGAATACCTTCTTTGTC 3197
Query 195048 TTGAATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTAACCGT 195107
||| || || ||||||||||| || ||||| ||| |||||| |||||||| | ||
Sbjct 3196 TTGGATCTTAGCTTTGACGTTCTCTATAGTGTCAGAAGCTTCCACCTCAAGGGTGATGGT 3137
Query 195108 CTTTCCTGTCAAAGTTTTTACGAACACTTGCAT 195140
|| || || | |||||||| || | ||||||
Sbjct 3136 TTTCCCAGTGAGGGTTTTTACAAAGATTTGCAT 3104
Score = 152 bits (168), Expect = 1e-31
Identities = 162/214 (76%), Gaps = 0/214 (0%)
Strand=Plus/Minus
Query 194928 CAAAACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATC 194987
|| ||| || |||||||| || ||||| || || || || || | || || || || ||
Sbjct 3772 CAGAACCAGATGAAGAGTAGATTCTTTCTGGATGTTATAGTCTGAGAGTGTCCTACCGTC 3713
Query 194988 TTCGAGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTC 195047
||| | ||| ||||| |||||||| | ||||| ||||| ||||||||||||||||||||
Sbjct 3712 TTCCAACTGTTTACCAGCGAAGATCAAACGTTGCTGGTCAGGAGGAATGCCTTCTTTGTC 3653
Query 195048 TTGAATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTAACCGT 195107
||| || || || ||||| || || ||||| || ||| ||||||||||| | ||
Sbjct 3652 TTGGATCTTAGCTTTTACGTTTTCTATTGTGTCAGAGGCTTCAACTTCAAGGGTGATGGT 3593
Query 195108 CTTTCCTGTCAAAGTTTTTACGAACACTTGCATT 195141
|| || || | |||||| ||||| | |||||||
Sbjct 3592 TTTACCGGTGAGAGTTTTCACGAAGATTTGCATT 3559
Score = 152 bits (168), Expect = 1e-31
Identities = 162/214 (76%), Gaps = 0/214 (0%)
Strand=Plus/Minus
Query 194928 CAAAACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATC 194987
|| ||| || |||||||| || ||||| || || || || || | || || || || ||
Sbjct 4000 CAGAACCAGATGAAGAGTAGATTCTTTCTGGATGTTATAGTCTGAGAGTGTCCTACCGTC 3941
Query 194988 TTCGAGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTC 195047
||| | ||| ||||| |||||||| | ||||| ||||| ||||||||||||||||||||
Sbjct 3940 TTCCAACTGTTTACCAGCGAAGATCAAACGTTGCTGGTCAGGAGGAATGCCTTCTTTGTC 3881
Query 195048 TTGAATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTAACCGT 195107
||| ||||| || ||||| || || ||||| || ||| |||||||| || | ||
Sbjct 3880 TTGGATTTTAGCTTTTACGTTTTCTATTGTGTCAGAGGCTTCAACTTCAAGAGTGATGGT 3821
Query 195108 CTTTCCTGTCAAAGTTTTTACGAACACTTGCATT 195141
|| || || | |||||| ||||| | |||||||
Sbjct 3820 TTTACCGGTGAGAGTTTTCACGAAGATTTGCATT 3787
Score = 141 bits (156), Expect = 2e-28
Identities = 159/213 (75%), Gaps = 0/213 (0%)
Strand=Plus/Minus
Query 194928 CAAAACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATC 194987
|| ||| || ||||| ||||| |||||||||||||| ||||| | |||||||| |||||
Sbjct 3544 CAGAACCAGATGAAGTGTGGATTCTTTTTGAATATTATAATCAGAGAGAGTTCTGCCATC 3485
Query 194988 TTCGAGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTC 195047
||| || || || || || || || || || || || || || ||||| || ||||||||
Sbjct 3484 TTCAAGTTGTTTGCCAGCAAAAATCAGACGCTGCTGATCCGGGGGAATTCCCTCTTTGTC 3425
Query 195048 TTGAATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTAACCGT 195107
||| ||||| || || || ||||| ||||| ||| ||| ||||| ||||| | ||
Sbjct 3424 TTGGATTTTGGCTTTCACATTTTCAATAGTGTCTGAAGCTTCGACTTCGAGGGTGATGGT 3365
Query 195108 CTTTCCTGTCAAAGTTTTTACGAACACTTGCAT 195140
|| || || | ||| || || || | |||||
Sbjct 3364 TTTACCCGTAAGAGTCTTCACAAAGATCTGCAT 3332
>seq3876
Length=890137
Score = 154 bits (170), Expect = 3e-32
Identities = 156/203 (77%), Gaps = 0/203 (0%)
Strand=Plus/Plus
Query 194938 TGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTCGAGCTGC 194997
|| || ||||| ||||||||||| ||||| || | |||||| | |||||||| |||||
Sbjct 521086 TGCAGTGTGGATTCTTTTTGAATGTTGTAGTCAGAAAGAGTGCGGCCATCTTCAAGCTGT 521145
Query 194998 TTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGAATTTTT 195057
|| || |||||||| | || || || |||||||| || |||||||||||||||||||||
Sbjct 521146 TTTCCGGCGAAGATCAATCTCTGCTGATCTGGAGGGATTCCTTCTTTGTCTTGAATTTTT 521205
Query 195058 TGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTAACCGTCTTTCCTGTC 195117
||||| || || || ||||| || || ||||| | || | || ||||| |||
Sbjct 521206 GCTTTGACATTTTCGATCGTGTCAGATGCCTCGACTTCCAACGTGATGGTTTTTCCGGTC 521265
Query 195118 AAAGTTTTTACGAACACTTGCAT 195140
|| ||||| ||||| | ||||||
Sbjct 521266 AATGTTTTGACGAAAATTTGCAT 521288
Score = 149 bits (164), Expect = 1e-30
Identities = 166/222 (75%), Gaps = 0/222 (0%)
Strand=Plus/Plus
Query 194919 TCTGAGTCTCAAAACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGT 194978
||| |||| | ||||||||||| || |||||||| |||||||| || |||| | |||
Sbjct 519699 TCTAAGTCGAAGTACAAGGTGAAGTGTAGACTCTTTCTGAATATTATAGTCGGATAAAGT 519758
Query 194979 TCTCCCATCTTCGAGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCC 195038
| ||||| || |||||||| || ||||| || |||| |||||| || |||||||||||
Sbjct 519759 CCGTCCATCCTCTAGCTGCTTGCCCGCGAAAATCAGTCTTTGTTGATCGGGAGGAATGCC 519818
Query 195039 TTCTTTGTCTTGAATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAG 195098
|||||| || |||||||| || ||||| || || ||||||||| || || || ||
Sbjct 519819 TTCTTTATCCTGAATTTTCGCTTTCACGTTTTCGATCGTGTCCGAAGCCTCAACCTCCAG 519878
Query 195099 GGTAACCGTCTTTCCTGTCAAAGTTTTTACGAACACTTGCAT 195140
|| | || || || || | ||| || || || | |||||
Sbjct 519879 TGTGATAGTTTTACCAGTGAGAGTCTTGACAAAAATCTGCAT 519920
Score = 145 bits (160), Expect = 2e-29
Identities = 163/218 (75%), Gaps = 0/218 (0%)
Strand=Plus/Plus
Query 194923 AGTCTCAAAACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTC 194982
|| || ||||| | || | ||||| || |||||||| ||||| || | ||| || |
Sbjct 520615 AGCCTTAAAACCAAATGCAATGTGGATTCCTTTTGAATGTTGTAGTCAGAAAGGGTACGG 520674
Query 194983 CCATCTTCGAGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCT 195042
|||||||| ||||| || || |||||||| | | || ||||| ||||| || |||||
Sbjct 520675 CCATCTTCAAGCTGTTTTCCGGCGAAGATCAACCTCTGCTGGTCCGGAGGGATTCCTTCC 520734
Query 195043 TTGTCTTGAATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTA 195102
||||| ||||||||| || ||||||||||| ||||| || || ||||| | ||
Sbjct 520735 TTGTCCTGAATTTTTGCTTTCACGTTCTCAATCGTGTCAGATGCCTCAACTTCCAATGTG 520794
Query 195103 ACCGTCTTTCCTGTCAAAGTTTTTACGAACACTTGCAT 195140
| |||||||| ||||| ||||| ||||| | ||||||
Sbjct 520795 ATGGTCTTTCCGGTCAATGTTTTGACGAAAATTTGCAT 520832
Score = 145 bits (160), Expect = 2e-29
Identities = 154/203 (76%), Gaps = 0/203 (0%)
Strand=Plus/Plus
Query 194938 TGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTCGAGCTGC 194997
|| || ||||| || || ||||||||||| || | ||| || | |||||||| |||||
Sbjct 520858 TGCAGTGTGGATTCCTTCTGAATATTGTAGTCAGAAAGTGTGCGGCCATCTTCAAGCTGT 520917
Query 194998 TTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGAATTTTT 195057
|| || || ||||| | || ||| || || ||||| || |||||||||||||||||||||
Sbjct 520918 TTTCCAGCAAAGATCAATCTTTGCTGATCCGGAGGGATTCCTTCTTTGTCTTGAATTTTT 520977
Query 195058 TGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTAACCGTCTTTCCTGTC 195117
||||| || || || ||||| || || ||||| | || | |||||||| |||
Sbjct 520978 GCTTTGACATTTTCGATCGTGTCAGATGCCTCAACTTCCAACGTGATGGTCTTTCCGGTC 521037
Query 195118 AAAGTTTTTACGAACACTTGCAT 195140
|| ||||| ||||| | ||||||
Sbjct 521038 AATGTTTTGACGAAAATTTGCAT 521060
Score = 143 bits (158), Expect = 6e-29
Identities = 154/204 (75%), Gaps = 0/204 (0%)
Strand=Plus/Plus
Query 194938 TGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTCGAGCTGC 194997
|| || ||||| ||||||||||| ||||| || | |||||| | |||||||| |||||
Sbjct 521314 TGCAGTGTGGATTCTTTTTGAATGTTGTAGTCAGAAAGAGTGCGGCCATCTTCAAGCTGT 521373
Query 194998 TTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGAATTTTT 195057
|| || ||||| || | || || || |||||||| || |||||||||||||||||||||
Sbjct 521374 TTTCCGGCGAAAATCAATCTCTGCTGATCTGGAGGGATTCCTTCTTTGTCTTGAATTTTT 521433
Query 195058 TGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTAACCGTCTTTCCTGTC 195117
||||| || || || ||||| || || ||||| | || | || |||||||||
Sbjct 521434 GCTTTGACATTTTCGATCGTGTCAGATGCCTCGACTTCCAACGTGATGGTTTTTCCTGTC 521493
Query 195118 AAAGTTTTTACGAACACTTGCATT 195141
| ||||| || || | ||||||
Sbjct 521494 AGGGTTTTGACAAAGATCTGCATT 521517
Score = 141 bits (156), Expect = 2e-28
Identities = 153/203 (75%), Gaps = 0/203 (0%)
Strand=Plus/Plus
Query 194938 TGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTCGAGCTGC 194997
|| |||||||| || || |||||||||||||||| | || | || ||||| ||||||
Sbjct 521542 TGGAGAGTGGATTCCTTCTGAATATTGTAATCGGATAAGGTACGTCCGTCTTCAAGCTGC 521601
Query 194998 TTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGAATTTTT 195057
|| || |||||||| | || || || || || || || ||||| || ||||| || |||
Sbjct 521602 TTTCCAGCGAAGATCAAACGCTGCTGATCGGGTGGGATACCTTCCTTATCTTGGATCTTT 521661
Query 195058 TGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTAACCGTCTTTCCTGTC 195117
|| || ||||| |||||||| ||| ||| ||||||||||| | ||||| || |||
Sbjct 521662 GCTTTTACATTCTCGATGGTGTCAGAAGCTTCAACTTCAAGGGTTATGGTCTTCCCGGTC 521721
Query 195118 AAAGTTTTTACGAACACTTGCAT 195140
|| || || ||||| | |||||
Sbjct 521722 AATGTCTTCACGAAAATCTGCAT 521744
Score = 138 bits (152), Expect = 3e-27
Identities = 162/219 (74%), Gaps = 0/219 (0%)
Strand=Plus/Plus
Query 194923 AGTCTCAAAACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTC 194982
|| |||||||| | || || || || || || ||||| || ||||| | ||| || |
Sbjct 520159 AGCCTCAAAACTAAATGCAGGGTAGATTCCTTCTGAATGTTATAATCAGAAAGCGTACGG 520218
Query 194983 CCATCTTCGAGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCT 195042
|| ||||||||||| || || || ||||| | | || || |||||||| || |||||
Sbjct 520219 CCGTCTTCGAGCTGTTTTCCGGCAAAGATCAACCTCTGCTGATCTGGAGGGATTCCTTCC 520278
Query 195043 TTGTCTTGAATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTA 195102
|||||||||||||| ||||| ||||| || |||||||| || ||||| | ||
Sbjct 520279 TTGTCTTGAATTTTGGCTTTGACATTCTCGATCGTGTCCGACGCCTCAACTTCCAACGTG 520338
Query 195103 ACCGTCTTTCCTGTCAAAGTTTTTACGAACACTTGCATT 195141
| ||||||||||| || || || ||||| | |||||||
Sbjct 520339 ATGGTCTTTCCTGTTAATGTCTTGACGAAAATTTGCATT 520377
Score = 123 bits (136), Expect = 6e-23
Identities = 158/218 (72%), Gaps = 0/218 (0%)
Strand=Plus/Plus
Query 194923 AGTCTCAAAACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTC 194982
|| |||||||| | || || || || || || ||||| || ||||| | ||| || |
Sbjct 519931 AGCCTCAAAACCAAATGCAGGGTAGATTCCTTCTGAATGTTATAATCAGAAAGCGTACGG 519990
Query 194983 CCATCTTCGAGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCT 195042
|| ||||||||||| || || || ||||| | | || || || |||||||||||||||
Sbjct 519991 CCGTCTTCGAGCTGTTTTCCGGCAAAGATCAACCTCTGCTGATCGGGAGGAATGCCTTCT 520050
Query 195043 TTGTCTTGAATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTA 195102
|| ||||||||||| ||| ||||| || || ||||||||| || || || || ||
Sbjct 520051 TTATCTTGAATTTTCGCCTTCACGTTTTCGATCGTGTCCGAAGCCTCAACCTCCAGTGTG 520110
Query 195103 ACCGTCTTTCCTGTCAAAGTTTTTACGAACACTTGCAT 195140
| || || || || | ||| || || || | |||||
Sbjct 520111 ATAGTTTTACCAGTGAGAGTCTTGACAAAAATCTGCAT 520148
Score = 123 bits (136), Expect = 6e-23
Identities = 146/198 (74%), Gaps = 0/198 (0%)
Strand=Plus/Plus
Query 194943 AGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTCGAGCTGCTTACC 195002
||| || || || ||||| || ||||| | ||| || | || ||||| ||||| || ||
Sbjct 520407 AGTCGATTCCTTCTGAATGTTATAATCTGAAAGTGTGCGACCGTCTTCAAGCTGTTTTCC 520466
Query 195003 TGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGAATTTTTTGCTT 195062
|||||||| | | || ||||| || || || ||||| ||||| ||||||||| ||
Sbjct 520467 GGCGAAGATCAACCTCTGCTGGTCCGGGGGGATTCCTTCCTTGTCCTGAATTTTTGCTTT 520526
Query 195063 GACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTAACCGTCTTTCCTGTCAAAGT 195122
||||||||||| |||||||| ||| ||||| || || | ||||| || || | ||
Sbjct 520527 CACGTTCTCAATCGTGTCCGACGCTTCGACTTCCAGAGTGATTGTCTTACCGGTGAGCGT 520586
Query 195123 TTTTACGAACACTTGCAT 195140
||| || || | ||||||
Sbjct 520587 TTTGACAAAAATTTGCAT 520604
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1109415882977841
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