Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Trachymyrmex_20zeteki_20[refseq_20GCF_5F001594055.1_202016-03-31] 4,623 sequences; 267,973,152 total letters Query= NC_018504.1 Length=123876 Score E Sequences producing significant alignments: (Bits) Value seq4552 185 7e-42 seq3876 143 2e-29 seq4069 93.3 3e-14 >seq4552 Length=86203 Score = 185 bits (204), Expect = 7e-42 Identities = 186/242 (77%), Gaps = 0/242 (0%) Strand=Plus/Minus Query 101241 TTCCTCCTCTTAAACGTAAAACTAAATGAAGGGTAGATTCTTTTTGTATATTGTAATCGG 101300 ||||||||| | ||| | ||| | |||||| || ||||||||||| ||||| ||||| | Sbjct 3560 TTCCTCCTCGAAGACGCAGAACCAGATGAAGTGTGGATTCTTTTTGAATATTATAATCAG 3501 Query 101301 CGATAGTTCTGGCATCGTCCAATTGCTTACCTGCAAATATCAAACGCTGTTGATCGGGCG 101360 || ||||||| |||| || | ||| || || ||||| |||| |||||| ||||| || | Sbjct 3500 AGAGAGTTCTGCCATCTTCAAGTTGTTTGCCAGCAAAAATCAGACGCTGCTGATCCGGGG 3441 Query 101361 GAATGCCTTCTTTATCTTGAATTTTTTGTTTTACAATTTCTACAGTGTCAGACGTTTCCA 101420 |||| || ||||| ||||| ||||| ||| ||| |||| | |||||| || | ||| | Sbjct 3440 GAATTCCCTCTTTGTCTTGGATTTTGGCTTTCACATTTTCAATAGTGTCTGAAGCTTCGA 3381 Query 101421 CTTCAAGAGTGACCGTTTTGCCGGTTAAAGTTTTTACAAATATCTGCATGGTTACGCGAA 101480 |||| || |||| ||||| || || | ||| || ||||| ||||||||| | | |||| Sbjct 3380 CTTCGAGGGTGATGGTTTTACCCGTAAGAGTCTTCACAAAGATCTGCATGCCTCCACGAA 3321 Query 101481 GA 101482 || Sbjct 3320 GA 3319 Score = 181 bits (200), Expect = 8e-41 Identities = 177/228 (78%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 101255 CGTAAAACTAAATGAAGGGTAGATTCTTTTTGTATATTGTAATCGGCGATAGTTCTGGCA 101314 ||||||||||| || || |||||||||||||| || |||||||| | | ||||||| | Sbjct 4458 CGTAAAACTAAGTGGAGTGTAGATTCTTTTTGGATGTTGTAATCAGAAAGAGTTCTGCCG 4399 Query 101315 TCGTCCAATTGCTTACCTGCAAATATCAAACGCTGTTGATCGGGCGGAATGCCTTCTTTA 101374 || |||| |||||| || || || || |||||||||||||| || || || |||||||| Sbjct 4398 TCTTCCAGTTGCTTGCCAGCGAAGATTAAACGCTGTTGATCTGGAGGGATTCCTTCTTTG 4339 Query 101375 TCTTGAATTTTTTGTTTTACAATTTCTACAGTGTCAGACGTTTCCACTTCAAGAGTGACC 101434 || |||||||| || || |||| | |||||| || | ||| ||||||||||||| Sbjct 4338 TCCTGAATTTTGGCCTTCACGTTTTCAATAGTGTCTGAAGCTTCGACTTCAAGAGTGATG 4279 Query 101435 GTTTTGCCGGTTAAAGTTTTTACAAATATCTGCATGGTTACGCGAAGA 101482 ||||| || || | |||||| ||||| || ||||| | | |||||| Sbjct 4278 GTTTTACCTGTGAGAGTTTTCACAAAAATTTGCATTCCTCCTCGAAGA 4231 Score = 176 bits (194), Expect = 4e-39 Identities = 184/242 (76%), Gaps = 0/242 (0%) Strand=Plus/Minus Query 101241 TTCCTCCTCTTAAACGTAAAACTAAATGAAGGGTAGATTCTTTTTGTATATTGTAATCGG 101300 ||||||||| | ||| | ||| | |||||| ||||||||||| || || || || || | Sbjct 4016 TTCCTCCTCGAAGACGCAGAACCAGATGAAGAGTAGATTCTTTCTGGATGTTATAGTCTG 3957 Query 101301 CGATAGTTCTGGCATCGTCCAATTGCTTACCTGCAAATATCAAACGCTGTTGATCGGGCG 101360 || || || | || ||||| || ||||| || || |||||||| || || || || | Sbjct 3956 AGAGTGTCCTACCGTCTTCCAACTGTTTACCAGCGAAGATCAAACGTTGCTGGTCAGGAG 3897 Query 101361 GAATGCCTTCTTTATCTTGAATTTTTTGTTTTACAATTTCTACAGTGTCAGACGTTTCCA 101420 ||||||||||||| ||||| ||||| |||||| |||||| |||||||| | ||| | Sbjct 3896 GAATGCCTTCTTTGTCTTGGATTTTAGCTTTTACGTTTTCTATTGTGTCAGAGGCTTCAA 3837 Query 101421 CTTCAAGAGTGACCGTTTTGCCGGTTAAAGTTTTTACAAATATCTGCATGGTTACGCGAA 101480 |||||||||||| ||||| ||||| | |||||| || || || ||||| | | |||| Sbjct 3836 CTTCAAGAGTGATGGTTTTACCGGTGAGAGTTTTCACGAAGATTTGCATTCCTCCTCGAA 3777 Query 101481 GA 101482 || Sbjct 3776 GA 3775 Score = 168 bits (186), Expect = 5e-37 Identities = 174/228 (76%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 101243 CCTCCTCTTAAACGTAAAACTAAATGAAGGGTAGATTCTTTTTGTATATTGTAATCGGCG 101302 ||||| | | ||| | ||| | |||||| |||||||| || || || |||||||||| Sbjct 3330 CCTCCACGAAGACGCAGAACAAGATGAAGTGTAGATTCCTTCTGGATGTTGTAATCGGAA 3271 Query 101303 ATAGTTCTGGCATCGTCCAATTGCTTACCTGCAAATATCAAACGCTGTTGATCGGGCGGA 101362 | |||||| |||| || | |||||| || ||||| || ||||| || ||||| || ||| Sbjct 3270 AGGGTTCTGCCATCCTCTAGTTGCTTTCCAGCAAAGATTAAACGTTGCTGATCTGGAGGA 3211 Query 101363 ATGCCTTCTTTATCTTGAATTTTTTGTTTTACAATTTCTACAGTGTCAGACGTTTCCACT 101422 || |||||||| ||||| || || ||| || | |||| ||||||||| | |||||| Sbjct 3210 ATACCTTCTTTGTCTTGGATCTTAGCTTTGACGTTCTCTATAGTGTCAGAAGCTTCCACC 3151 Query 101423 TCAAGAGTGACCGTTTTGCCGGTTAAAGTTTTTACAAATATCTGCATG 101470 ||||| |||| ||||| || || | ||||||||||| || |||||| Sbjct 3150 TCAAGGGTGATGGTTTTCCCAGTGAGGGTTTTTACAAAGATTTGCATG 3103 Score = 167 bits (184), Expect = 2e-36 Identities = 182/242 (75%), Gaps = 0/242 (0%) Strand=Plus/Minus Query 101241 TTCCTCCTCTTAAACGTAAAACTAAATGAAGGGTAGATTCTTTTTGTATATTGTAATCGG 101300 ||||||||| | ||| | ||| | |||||| ||||||||||| || || || || || | Sbjct 3788 TTCCTCCTCGAAGACGCAGAACCAGATGAAGAGTAGATTCTTTCTGGATGTTATAGTCTG 3729 Query 101301 CGATAGTTCTGGCATCGTCCAATTGCTTACCTGCAAATATCAAACGCTGTTGATCGGGCG 101360 || || || | || ||||| || ||||| || || |||||||| || || || || | Sbjct 3728 AGAGTGTCCTACCGTCTTCCAACTGTTTACCAGCGAAGATCAAACGTTGCTGGTCAGGAG 3669 Query 101361 GAATGCCTTCTTTATCTTGAATTTTTTGTTTTACAATTTCTACAGTGTCAGACGTTTCCA 101420 ||||||||||||| ||||| || || |||||| |||||| |||||||| | ||| | Sbjct 3668 GAATGCCTTCTTTGTCTTGGATCTTAGCTTTTACGTTTTCTATTGTGTCAGAGGCTTCAA 3609 Query 101421 CTTCAAGAGTGACCGTTTTGCCGGTTAAAGTTTTTACAAATATCTGCATGGTTACGCGAA 101480 ||||||| |||| ||||| ||||| | |||||| || || || ||||| | | |||| Sbjct 3608 CTTCAAGGGTGATGGTTTTACCGGTGAGAGTTTTCACGAAGATTTGCATTCCTCCTCGAA 3549 Query 101481 GA 101482 || Sbjct 3548 GA 3547 Score = 167 bits (184), Expect = 2e-36 Identities = 182/242 (75%), Gaps = 0/242 (0%) Strand=Plus/Minus Query 101241 TTCCTCCTCTTAAACGTAAAACTAAATGAAGGGTAGATTCTTTTTGTATATTGTAATCGG 101300 ||||||||| | ||| | ||| || ||||| || ||||||||||| || ||||| |||| Sbjct 4244 TTCCTCCTCGAAGACGCAGAACCAAGTGAAGTGTGGATTCTTTTTGGATGTTGTAGTCGG 4185 Query 101301 CGATAGTTCTGGCATCGTCCAATTGCTTACCTGCAAATATCAAACGCTGTTGATCGGGCG 101360 | ||||||| |||| |||| ||| ||||| || || |||| |||||||||||| || | Sbjct 4184 AAAGAGTTCTGCCATCTTCCAGTTGTTTACCGGCGAAGATCAGACGCTGTTGATCCGGTG 4125 Query 101361 GAATGCCTTCTTTATCTTGAATTTTTTGTTTTACAATTTCTACAGTGTCAGACGTTTCCA 101420 |||| || ||||| || || ||||| ||||| |||| | ||||| || | ||| | Sbjct 4124 GAATTCCCTCTTTGTCCTGGATTTTAGCCTTTACGTTTTCAATGGTGTCTGAAGCTTCGA 4065 Query 101421 CTTCAAGAGTGACCGTTTTGCCGGTTAAAGTTTTTACAAATATCTGCATGGTTACGCGAA 101480 |||| || || | ||||| ||||| | |||||| || || || ||||| | | |||| Sbjct 4064 CTTCGAGGGTAATGGTTTTACCGGTGAGAGTTTTCACGAAGATTTGCATTCCTCCTCGAA 4005 Query 101481 GA 101482 || Sbjct 4004 GA 4003 >seq3876 Length=890137 Score = 143 bits (158), Expect = 2e-29 Identities = 168/227 (74%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 101243 CCTCCTCTTAAACGTAAAACTAAATGAAGGGTAGATTCTTTTTGTATATTGTAATCGGCG 101302 || || | |||||| | ||| ||||| || || ||||||||||| || ||||| || | Sbjct 521062 CCACCACGTAAACGGAGAACCAAATGCAGTGTGGATTCTTTTTGAATGTTGTAGTCAGAA 521121 Query 101303 ATAGTTCTGGCATCGTCCAATTGCTTACCTGCAAATATCAAACGCTGTTGATCGGGCGGA 101362 | ||| | | |||| || | || || || || || ||||| | ||| ||||| || || Sbjct 521122 AGAGTGCGGCCATCTTCAAGCTGTTTTCCGGCGAAGATCAATCTCTGCTGATCTGGAGGG 521181 Query 101363 ATGCCTTCTTTATCTTGAATTTTTTGTTTTACAATTTCTACAGTGTCAGACGTTTCCACT 101422 || |||||||| |||||||||||| ||| ||| |||| | |||||||| | || ||| Sbjct 521182 ATTCCTTCTTTGTCTTGAATTTTTGCTTTGACATTTTCGATCGTGTCAGATGCCTCGACT 521241 Query 101423 TCAAGAGTGACCGTTTTGCCGGTTAAAGTTTTTACAAATATCTGCAT 101469 || | |||| ||||| ||||| || ||||| || || || ||||| Sbjct 521242 TCCAACGTGATGGTTTTTCCGGTCAATGTTTTGACGAAAATTTGCAT 521288 Score = 143 bits (158), Expect = 2e-29 Identities = 168/227 (74%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 101243 CCTCCTCTTAAACGTAAAACTAAATGAAGGGTAGATTCTTTTTGTATATTGTAATCGGCG 101302 || || | |||||| | ||| ||||| || || ||||||||||| || ||||| || | Sbjct 521290 CCACCACGTAAACGGAGAACCAAATGCAGTGTGGATTCTTTTTGAATGTTGTAGTCAGAA 521349 Query 101303 ATAGTTCTGGCATCGTCCAATTGCTTACCTGCAAATATCAAACGCTGTTGATCGGGCGGA 101362 | ||| | | |||| || | || || || || || ||||| | ||| ||||| || || Sbjct 521350 AGAGTGCGGCCATCTTCAAGCTGTTTTCCGGCGAAAATCAATCTCTGCTGATCTGGAGGG 521409 Query 101363 ATGCCTTCTTTATCTTGAATTTTTTGTTTTACAATTTCTACAGTGTCAGACGTTTCCACT 101422 || |||||||| |||||||||||| ||| ||| |||| | |||||||| | || ||| Sbjct 521410 ATTCCTTCTTTGTCTTGAATTTTTGCTTTGACATTTTCGATCGTGTCAGATGCCTCGACT 521469 Query 101423 TCAAGAGTGACCGTTTTGCCGGTTAAAGTTTTTACAAATATCTGCAT 101469 || | |||| ||||| || || | ||||| ||||| |||||||| Sbjct 521470 TCCAACGTGATGGTTTTTCCTGTCAGGGTTTTGACAAAGATCTGCAT 521516 Score = 140 bits (154), Expect = 3e-28 Identities = 158/212 (75%), Gaps = 0/212 (0%) Strand=Plus/Plus Query 101261 ACTAAATGAAGGGTAGATTCTTTTTGTATATTGTAATCGGCGATAGTTCTGGCATCGTCC 101320 || ||||| || || ||||| || || ||||||||||||| | || | | || || Sbjct 521536 ACCAAATGGAGAGTGGATTCCTTCTGAATATTGTAATCGGATAAGGTACGTCCGTCTTCA 521595 Query 101321 AATTGCTTACCTGCAAATATCAAACGCTGTTGATCGGGCGGAATGCCTTCTTTATCTTGA 101380 | ||||| || || || ||||||||||| |||||||| || || ||||| |||||||| Sbjct 521596 AGCTGCTTTCCAGCGAAGATCAAACGCTGCTGATCGGGTGGGATACCTTCCTTATCTTGG 521655 Query 101381 ATTTTTTGTTTTACAATTTCTACAGTGTCAGACGTTTCCACTTCAAGAGTGACCGTTTTG 101440 || ||| ||||||| | || | |||||||| | ||| |||||||| || | || || Sbjct 521656 ATCTTTGCTTTTACATTCTCGATGGTGTCAGAAGCTTCAACTTCAAGGGTTATGGTCTTC 521715 Query 101441 CCGGTTAAAGTTTTTACAAATATCTGCATGGT 101472 ||||| || || || || || |||||||| || Sbjct 521716 CCGGTCAATGTCTTCACGAAAATCTGCATAGT 521747 Score = 136 bits (150), Expect = 3e-27 Identities = 171/235 (73%), Gaps = 0/235 (0%) Strand=Plus/Plus Query 101235 AGACATTTCCTCCTCTTAAACGTAAAACTAAATGAAGGGTAGATTCTTTTTGTATATTGT 101294 |||||| ||| ||||| | || | || | ||||| ||||| ||||| || ||||| | Sbjct 519686 AGACATCTCCGCCTCTAAGTCGAAGTACAAGGTGAAGTGTAGACTCTTTCTGAATATTAT 519745 Query 101295 AATCGGCGATAGTTCTGGCATCGTCCAATTGCTTACCTGCAAATATCAAACGCTGTTGAT 101354 | |||| | ||| | |||| || | ||||| || || || |||| | ||||||| Sbjct 519746 AGTCGGATAAAGTCCGTCCATCCTCTAGCTGCTTGCCCGCGAAAATCAGTCTTTGTTGAT 519805 Query 101355 CGGGCGGAATGCCTTCTTTATCTTGAATTTTTTGTTTTACAATTTCTACAGTGTCAGACG 101414 |||| ||||||||||||||||| |||||||| ||| || |||| | ||||| || | Sbjct 519806 CGGGAGGAATGCCTTCTTTATCCTGAATTTTCGCTTTCACGTTTTCGATCGTGTCCGAAG 519865 Query 101415 TTTCCACTTCAAGAGTGACCGTTTTGCCGGTTAAAGTTTTTACAAATATCTGCAT 101469 || || || || |||| ||||| || || | ||| || ||||| |||||||| Sbjct 519866 CCTCAACCTCCAGTGTGATAGTTTTACCAGTGAGAGTCTTGACAAAAATCTGCAT 519920 Score = 134 bits (148), Expect = 1e-26 Identities = 157/212 (74%), Gaps = 0/212 (0%) Strand=Plus/Plus Query 101258 AAAACTAAATGAAGGGTAGATTCTTTTTGTATATTGTAATCGGCGATAGTTCTGGCATCG 101317 ||||| ||||| ||||||||||| || || || || ||||| | | || | | | || Sbjct 519937 AAAACCAAATGCAGGGTAGATTCCTTCTGAATGTTATAATCAGAAAGCGTACGGCCGTCT 519996 Query 101318 TCCAATTGCTTACCTGCAAATATCAAACGCTGTTGATCGGGCGGAATGCCTTCTTTATCT 101377 || | || || || ||||| ||||| | ||| |||||||| |||||||||||||||||| Sbjct 519997 TCGAGCTGTTTTCCGGCAAAGATCAACCTCTGCTGATCGGGAGGAATGCCTTCTTTATCT 520056 Query 101378 TGAATTTTTTGTTTTACAATTTCTACAGTGTCAGACGTTTCCACTTCAAGAGTGACCGTT 101437 |||||||| || || |||| | ||||| || | || || || || |||| ||| Sbjct 520057 TGAATTTTCGCCTTCACGTTTTCGATCGTGTCCGAAGCCTCAACCTCCAGTGTGATAGTT 520116 Query 101438 TTGCCGGTTAAAGTTTTTACAAATATCTGCAT 101469 || || || | ||| || ||||| |||||||| Sbjct 520117 TTACCAGTGAGAGTCTTGACAAAAATCTGCAT 520148 Score = 131 bits (144), Expect = 1e-25 Identities = 165/227 (73%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 101243 CCTCCTCTTAAACGTAAAACTAAATGAAGGGTAGATTCTTTTTGTATATTGTAATCGGCG 101302 || || | |||||| | ||| ||||| || || ||||| || || |||||||| || | Sbjct 520834 CCACCACGTAAACGGAGAACCAAATGCAGTGTGGATTCCTTCTGAATATTGTAGTCAGAA 520893 Query 101303 ATAGTTCTGGCATCGTCCAATTGCTTACCTGCAAATATCAAACGCTGTTGATCGGGCGGA 101362 | || | | |||| || | || || || ||||| ||||| | || ||||| || || Sbjct 520894 AGTGTGCGGCCATCTTCAAGCTGTTTTCCAGCAAAGATCAATCTTTGCTGATCCGGAGGG 520953 Query 101363 ATGCCTTCTTTATCTTGAATTTTTTGTTTTACAATTTCTACAGTGTCAGACGTTTCCACT 101422 || |||||||| |||||||||||| ||| ||| |||| | |||||||| | || ||| Sbjct 520954 ATTCCTTCTTTGTCTTGAATTTTTGCTTTGACATTTTCGATCGTGTCAGATGCCTCAACT 521013 Query 101423 TCAAGAGTGACCGTTTTGCCGGTTAAAGTTTTTACAAATATCTGCAT 101469 || | |||| || || ||||| || ||||| || || || ||||| Sbjct 521014 TCCAACGTGATGGTCTTTCCGGTCAATGTTTTGACGAAAATTTGCAT 521060 Score = 116 bits (128), Expect = 3e-21 Identities = 153/212 (72%), Gaps = 0/212 (0%) Strand=Plus/Plus Query 101258 AAAACTAAATGAAGGGTAGATTCTTTTTGTATATTGTAATCGGCGATAGTTCTGGCATCG 101317 ||||||||||| ||||||||||| || || || || ||||| | | || | | | || Sbjct 520165 AAAACTAAATGCAGGGTAGATTCCTTCTGAATGTTATAATCAGAAAGCGTACGGCCGTCT 520224 Query 101318 TCCAATTGCTTACCTGCAAATATCAAACGCTGTTGATCGGGCGGAATGCCTTCTTTATCT 101377 || | || || || ||||| ||||| | ||| ||||| || || || ||||| || ||| Sbjct 520225 TCGAGCTGTTTTCCGGCAAAGATCAACCTCTGCTGATCTGGAGGGATTCCTTCCTTGTCT 520284 Query 101378 TGAATTTTTTGTTTTACAATTTCTACAGTGTCAGACGTTTCCACTTCAAGAGTGACCGTT 101437 |||||||| ||| ||| | || | ||||| |||| || ||||| | |||| || Sbjct 520285 TGAATTTTGGCTTTGACATTCTCGATCGTGTCCGACGCCTCAACTTCCAACGTGATGGTC 520344 Query 101438 TTGCCGGTTAAAGTTTTTACAAATATCTGCAT 101469 || || ||||| || || || || || ||||| Sbjct 520345 TTTCCTGTTAATGTCTTGACGAAAATTTGCAT 520376 >seq4069 Length=1127261 Score = 93.3 bits (102), Expect = 3e-14 Identities = 135/191 (71%), Gaps = 0/191 (0%) Strand=Plus/Minus Query 101280 CTTTTTGTATATTGTAATCGGCGATAGTTCTGGCATCGTCCAATTGCTTACCTGCAAATA 101339 ||||||| ||||| ||||||| | ||| | |||| |||| ||| || || || || | Sbjct 161737 CTTTTTGGATATTATAATCGGACAGAGTGCGTCCATCCTCCAGTTGTTTGCCGGCGAAGA 161678 Query 101340 TCAAACGCTGTTGATCGGGCGGAATGCCTTCTTTATCTTGAATTTTTTGTTTTACAATTT 101399 | | ||||||||||| |||||||| || || || || || || || || ||| | | Sbjct 161677 TGAGTCGCTGTTGATCTGGCGGAATTCCCTCCTTGTCCTGGATCTTGGCCTTGACATTCT 161618 Query 101400 CTACAGTGTCAGACGTTTCCACTTCAAGAGTGACCGTTTTGCCGGTTAAAGTTTTTACAA 101459 | | || || || | || || || || |||| ||||| || || | ||||| || | Sbjct 161617 CGATGGTATCGGAGGCCTCTACCTCGAGGGTGATGGTTTTACCCGTGAGGGTTTTCACGA 161558 Query 101460 ATATCTGCATG 101470 | ||||||||| Sbjct 161557 AGATCTGCATG 161547 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 396256072560411