Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Trachymyrmex_20zeteki_20[refseq_20GCF_5F001594055.1_202016-03-31]
4,623 sequences; 267,973,152 total letters
Query= NC_018875.1
Length=119082
Score E
Sequences producing significant alignments: (Bits) Value
seq4552 114 1e-20
seq3876 111 1e-19
seq4069 95.1 9e-15
>seq4552
Length=86203
Score = 114 bits (126), Expect = 1e-20
Identities = 156/218 (72%), Gaps = 0/218 (0%)
Strand=Plus/Minus
Query 48549 AGCCGCAACACCAAATGTAGCGTGCTCTCTTTTTGAATATTGTAATCAGATAGACTTCGA 48608
|| |||| |||| ||| || ||| |||||||||||||| |||||||| ||| |||
Sbjct 3549 AGACGCAGAACCAGATGAAGTGTGGATTCTTTTTGAATATTATAATCAGAGAGAGTTCTG 3490
Query 48609 TCGTCGTCCAACTGCTTACCGGCAAATATCAGTCGCTGTTGATCCGTGGGAACGCCCTCC 48668
| || || | || || || ||||| ||||| ||||| ||||||| ||||| |||||
Sbjct 3489 CCATCTTCAAGTTGTTTGCCAGCAAAAATCAGACGCTGCTGATCCGGGGGAATTCCCTCT 3430
Query 48669 TTGTCGCTAATCTTTTGTTTTACAGAACCCACAGACTCTGACGCCTCCACCTCCACCGTA 48728
||||| || || ||| ||| | | || ||||| || || || || | ||
Sbjct 3429 TTGTCTTGGATTTTGGCTTTCACATTTTCAATAGTGTCTGAAGCTTCGACTTCGAGGGTG 3370
Query 48729 ATCGTTTTTCCCGTCAAAGTTTTTACAAAAATCTGCAT 48766
|| ||||| ||||| | ||| || ||||| ||||||||
Sbjct 3369 ATGGTTTTACCCGTAAGAGTCTTCACAAAGATCTGCAT 3332
Score = 96.9 bits (106), Expect = 3e-15
Identities = 152/218 (70%), Gaps = 0/218 (0%)
Strand=Plus/Minus
Query 48549 AGCCGCAACACCAAATGTAGCGTGCTCTCTTTTTGAATATTGTAATCAGATAGACTTCGA 48608
|| |||| ||||| || || ||| |||||||| || ||||| || || ||| |||
Sbjct 4233 AGACGCAGAACCAAGTGAAGTGTGGATTCTTTTTGGATGTTGTAGTCGGAAAGAGTTCTG 4174
Query 48609 TCGTCGTCCAACTGCTTACCGGCAAATATCAGTCGCTGTTGATCCGTGGGAACGCCCTCC 48668
| || |||| || |||||||| || ||||| ||||||||||||| |||| |||||
Sbjct 4173 CCATCTTCCAGTTGTTTACCGGCGAAGATCAGACGCTGTTGATCCGGTGGAATTCCCTCT 4114
Query 48669 TTGTCGCTAATCTTTTGTTTTACAGAACCCACAGACTCTGACGCCTCCACCTCCACCGTA 48728
||||| || || ||||| | | | ||||| || || || || | |||
Sbjct 4113 TTGTCCTGGATTTTAGCCTTTACGTTTTCAATGGTGTCTGAAGCTTCGACTTCGAGGGTA 4054
Query 48729 ATCGTTTTTCCCGTCAAAGTTTTTACAAAAATCTGCAT 48766
|| ||||| || || | |||||| || || || |||||
Sbjct 4053 ATGGTTTTACCGGTGAGAGTTTTCACGAAGATTTGCAT 4016
Score = 84.2 bits (92), Expect = 2e-11
Identities = 133/191 (70%), Gaps = 0/191 (0%)
Strand=Plus/Minus
Query 48576 TCTTTTTGAATATTGTAATCAGATAGACTTCGATCGTCGTCCAACTGCTTACCGGCAAAT 48635
|||||||| || ||||||||||| ||| ||| |||| |||| ||||| || || ||
Sbjct 4434 TCTTTTTGGATGTTGTAATCAGAAAGAGTTCTGCCGTCTTCCAGTTGCTTGCCAGCGAAG 4375
Query 48636 ATCAGTCGCTGTTGATCCGTGGGAACGCCCTCCTTGTCGCTAATCTTTTGTTTTACAGAA 48695
|| | ||||||||||| | || | || || ||||| ||| || || ||
Sbjct 4374 ATTAAACGCTGTTGATCTGGAGGGATTCCTTCTTTGTCCTGAATTTTGGCCTTCACGTTT 4315
Query 48696 CCCACAGACTCTGACGCCTCCACCTCCACCGTAATCGTTTTTCCCGTCAAAGTTTTTACA 48755
| | || ||||| || || || || | || || ||||| || || | |||||| |||
Sbjct 4314 TCAATAGTGTCTGAAGCTTCGACTTCAAGAGTGATGGTTTTACCTGTGAGAGTTTTCACA 4255
Query 48756 AAAATCTGCAT 48766
||||| |||||
Sbjct 4254 AAAATTTGCAT 4244
>seq3876
Length=890137
Score = 111 bits (122), Expect = 1e-19
Identities = 150/209 (72%), Gaps = 0/209 (0%)
Strand=Plus/Plus
Query 48558 ACCAAATGTAGCGTGCTCTCTTTTTGAATATTGTAATCAGATAGACTTCGATCGTCGTCC 48617
|||||||| || ||| ||||||||||| ||||| ||||| ||| | || | || ||
Sbjct 521080 ACCAAATGCAGTGTGGATTCTTTTTGAATGTTGTAGTCAGAAAGAGTGCGGCCATCTTCA 521139
Query 48618 AACTGCTTACCGGCAAATATCAGTCGCTGTTGATCCGTGGGAACGCCCTCCTTGTCGCTA 48677
| ||| || ||||| || |||| || ||| ||||| | || | || || ||||| |
Sbjct 521140 AGCTGTTTTCCGGCGAAGATCAATCTCTGCTGATCTGGAGGGATTCCTTCTTTGTCTTGA 521199
Query 48678 ATCTTTTGTTTTACAGAACCCACAGACTCTGACGCCTCCACCTCCACCGTAATCGTTTTT 48737
|| ||| ||| ||| | | | || || ||||| || |||| ||| || ||||||
Sbjct 521200 ATTTTTGCTTTGACATTTTCGATCGTGTCAGATGCCTCGACTTCCAACGTGATGGTTTTT 521259
Query 48738 CCCGTCAAAGTTTTTACAAAAATCTGCAT 48766
|| ||||| ||||| || ||||| |||||
Sbjct 521260 CCGGTCAATGTTTTGACGAAAATTTGCAT 521288
Score = 111 bits (122), Expect = 1e-19
Identities = 150/209 (72%), Gaps = 0/209 (0%)
Strand=Plus/Plus
Query 48558 ACCAAATGTAGCGTGCTCTCTTTTTGAATATTGTAATCAGATAGACTTCGATCGTCGTCC 48617
|||||||| || ||| ||||||||||| ||||| ||||| ||| | || | || ||
Sbjct 521308 ACCAAATGCAGTGTGGATTCTTTTTGAATGTTGTAGTCAGAAAGAGTGCGGCCATCTTCA 521367
Query 48618 AACTGCTTACCGGCAAATATCAGTCGCTGTTGATCCGTGGGAACGCCCTCCTTGTCGCTA 48677
| ||| || ||||| || |||| || ||| ||||| | || | || || ||||| |
Sbjct 521368 AGCTGTTTTCCGGCGAAAATCAATCTCTGCTGATCTGGAGGGATTCCTTCTTTGTCTTGA 521427
Query 48678 ATCTTTTGTTTTACAGAACCCACAGACTCTGACGCCTCCACCTCCACCGTAATCGTTTTT 48737
|| ||| ||| ||| | | | || || ||||| || |||| ||| || ||||||
Sbjct 521428 ATTTTTGCTTTGACATTTTCGATCGTGTCAGATGCCTCGACTTCCAACGTGATGGTTTTT 521487
Query 48738 CCCGTCAAAGTTTTTACAAAAATCTGCAT 48766
|| |||| ||||| ||||| ||||||||
Sbjct 521488 CCTGTCAGGGTTTTGACAAAGATCTGCAT 521516
Score = 98.7 bits (108), Expect = 8e-16
Identities = 147/209 (70%), Gaps = 0/209 (0%)
Strand=Plus/Plus
Query 48558 ACCAAATGTAGCGTGCTCTCTTTTTGAATATTGTAATCAGATAGACTTCGATCGTCGTCC 48617
|||||||| || ||| || || ||||||||||| ||||| || | || | || ||
Sbjct 520852 ACCAAATGCAGTGTGGATTCCTTCTGAATATTGTAGTCAGAAAGTGTGCGGCCATCTTCA 520911
Query 48618 AACTGCTTACCGGCAAATATCAGTCGCTGTTGATCCGTGGGAACGCCCTCCTTGTCGCTA 48677
| ||| || || ||||| |||| || || ||||||| || | || || ||||| |
Sbjct 520912 AGCTGTTTTCCAGCAAAGATCAATCTTTGCTGATCCGGAGGGATTCCTTCTTTGTCTTGA 520971
Query 48678 ATCTTTTGTTTTACAGAACCCACAGACTCTGACGCCTCCACCTCCACCGTAATCGTTTTT 48737
|| ||| ||| ||| | | | || || ||||| || |||| ||| || || |||
Sbjct 520972 ATTTTTGCTTTGACATTTTCGATCGTGTCAGATGCCTCAACTTCCAACGTGATGGTCTTT 521031
Query 48738 CCCGTCAAAGTTTTTACAAAAATCTGCAT 48766
|| ||||| ||||| || ||||| |||||
Sbjct 521032 CCGGTCAATGTTTTGACGAAAATTTGCAT 521060
Score = 95.1 bits (104), Expect = 9e-15
Identities = 157/227 (69%), Gaps = 0/227 (0%)
Strand=Plus/Plus
Query 48540 CCGCCCCTTAGCCGCAACACCAAATGTAGCGTGCTCTCTTTTTGAATATTGTAATCAGAT 48599
||||| | |||| ||| |||||||| || || || || ||||| || ||||||||
Sbjct 519922 CCGCCGCGAAGCCTCAAAACCAAATGCAGGGTAGATTCCTTCTGAATGTTATAATCAGAA 519981
Query 48600 AGACTTCGATCGTCGTCCAACTGCTTACCGGCAAATATCAGTCGCTGTTGATCCGTGGGA 48659
|| | || |||| || | ||| || |||||||| |||| | ||| ||||| | |||
Sbjct 519982 AGCGTACGGCCGTCTTCGAGCTGTTTTCCGGCAAAGATCAACCTCTGCTGATCGGGAGGA 520041
Query 48660 ACGCCCTCCTTGTCGCTAATCTTTTGTTTTACAGAACCCACAGACTCTGACGCCTCCACC 48719
| ||| || || || ||| || || || | | | || || ||||| |||
Sbjct 520042 ATGCCTTCTTTATCTTGAATTTTCGCCTTCACGTTTTCGATCGTGTCCGAAGCCTCAACC 520101
Query 48720 TCCACCGTAATCGTTTTTCCCGTCAAAGTTTTTACAAAAATCTGCAT 48766
|||| || || ||||| || || | ||| || ||||||||||||||
Sbjct 520102 TCCAGTGTGATAGTTTTACCAGTGAGAGTCTTGACAAAAATCTGCAT 520148
Score = 91.5 bits (100), Expect = 1e-13
Identities = 158/230 (69%), Gaps = 0/230 (0%)
Strand=Plus/Plus
Query 48537 TCGCCGCCCCTTAGCCGCAACACCAAATGTAGCGTGCTCTCTTTTTGAATATTGTAATCA 48596
|| ||||| || || || | || | || || || |||||| |||||||| || ||
Sbjct 519691 TCTCCGCCTCTAAGTCGAAGTACAAGGTGAAGTGTAGACTCTTTCTGAATATTATAGTCG 519750
Query 48597 GATAGACTTCGATCGTCGTCCAACTGCTTACCGGCAAATATCAGTCGCTGTTGATCCGTG 48656
|||| | | || | || || | |||||| || || || ||||||| |||||||| |
Sbjct 519751 GATAAAGTCCGTCCATCCTCTAGCTGCTTGCCCGCGAAAATCAGTCTTTGTTGATCGGGA 519810
Query 48657 GGAACGCCCTCCTTGTCGCTAATCTTTTGTTTTACAGAACCCACAGACTCTGACGCCTCC 48716
|||| ||| || || || ||| || ||| || | | | || || |||||
Sbjct 519811 GGAATGCCTTCTTTATCCTGAATTTTCGCTTTCACGTTTTCGATCGTGTCCGAAGCCTCA 519870
Query 48717 ACCTCCACCGTAATCGTTTTTCCCGTCAAAGTTTTTACAAAAATCTGCAT 48766
||||||| || || ||||| || || | ||| || ||||||||||||||
Sbjct 519871 ACCTCCAGTGTGATAGTTTTACCAGTGAGAGTCTTGACAAAAATCTGCAT 519920
Score = 91.5 bits (100), Expect = 1e-13
Identities = 148/213 (69%), Gaps = 0/213 (0%)
Strand=Plus/Plus
Query 48558 ACCAAATGTAGCGTGCTCTCTTTTTGAATATTGTAATCAGATAGACTTCGATCGTCGTCC 48617
|||||||| || ||| || || |||||||||||||| |||| | || |||| ||
Sbjct 521536 ACCAAATGGAGAGTGGATTCCTTCTGAATATTGTAATCGGATAAGGTACGTCCGTCTTCA 521595
Query 48618 AACTGCTTACCGGCAAATATCAGTCGCTGTTGATCCGTGGGAACGCCCTCCTTGTCGCTA 48677
| |||||| || || || |||| ||||| ||||| | || | || ||||| ||
Sbjct 521596 AGCTGCTTTCCAGCGAAGATCAAACGCTGCTGATCGGGTGGGATACCTTCCTTATCTTGG 521655
Query 48678 ATCTTTTGTTTTACAGAACCCACAGACTCTGACGCCTCCACCTCCACCGTAATCGTTTTT 48737
|||||| ||||||| | | | || || || || || || | || || || ||
Sbjct 521656 ATCTTTGCTTTTACATTCTCGATGGTGTCAGAAGCTTCAACTTCAAGGGTTATGGTCTTC 521715
Query 48738 CCCGTCAAAGTTTTTACAAAAATCTGCATCGTG 48770
|| ||||| || || || ||||||||||| |||
Sbjct 521716 CCGGTCAATGTCTTCACGAAAATCTGCATAGTG 521748
>seq4069
Length=1127261
Score = 95.1 bits (104), Expect = 9e-15
Identities = 135/190 (71%), Gaps = 0/190 (0%)
Strand=Plus/Minus
Query 48577 CTTTTTGAATATTGTAATCAGATAGACTTCGATCGTCGTCCAACTGCTTACCGGCAAATA 48636
||||||| ||||| ||||| || ||| | || | || |||| || || ||||| || |
Sbjct 161737 CTTTTTGGATATTATAATCGGACAGAGTGCGTCCATCCTCCAGTTGTTTGCCGGCGAAGA 161678
Query 48637 TCAGTCGCTGTTGATCCGTGGGAACGCCCTCCTTGTCGCTAATCTTTTGTTTTACAGAAC 48696
| |||||||||||||| | |||| ||||||||||| ||||| || |||
Sbjct 161677 TGAGTCGCTGTTGATCTGGCGGAATTCCCTCCTTGTCCTGGATCTTGGCCTTGACATTCT 161618
Query 48697 CCACAGACTCTGACGCCTCCACCTCCACCGTAATCGTTTTTCCCGTCAAAGTTTTTACAA 48756
| | | || || ||||| ||||| | || || ||||| ||||| | ||||| || |
Sbjct 161617 CGATGGTATCGGAGGCCTCTACCTCGAGGGTGATGGTTTTACCCGTGAGGGTTTTCACGA 161558
Query 48757 AAATCTGCAT 48766
| ||||||||
Sbjct 161557 AGATCTGCAT 161548
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 380916136904229
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