Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Trachymyrmex_20zeteki_20[refseq_20GCF_5F001594055.1_202016-03-31] 4,623 sequences; 267,973,152 total letters Query= NC_020845.1 Length=180977 Score E Sequences producing significant alignments: (Bits) Value seq3801 113 5e-20 >seq3801 Length=979534 Score = 113 bits (124), Expect = 5e-20 Identities = 170/242 (70%), Gaps = 0/242 (0%) Strand=Plus/Plus Query 138183 ACACCAATAGGACCTACGCCAGGACCTCCACCTCCATGTGGAATACAGAATGTCTTATGT 138242 || || |||||||| | ||||| || ||||| || |||||||| ||||| || |||||| Sbjct 445732 ACTCCGATAGGACCCATACCAGGTCCGCCACCCCCGTGTGGAATGCAGAACGTTTTATGT 445791 Query 138243 AAATTTAGATGACATACATCTGCACCATAGTCACATGGTTTTGCTAGACCTACCTGTGCA 138302 | ||| ||||| | || || ||||| |||| ||| | || || || ||| Sbjct 445792 AGATTGAGATGCGACACGTCGCTGCCATAATCACCAGGTCGACACAAGCCAACTTGAGCA 445851 Query 138303 TTTAGATTTGCACCATCGAGATATACCTGACCACCATTGTCATGAACGATCTTACATATC 138362 || | ||| || ||||| | ||||| ||||||||| || || || || | ||||| Sbjct 445852 TTCATATTGGCGCCATCCAAGTATACTTGACCACCAGCGTTGTGCACCATGCTGCATATA 445911 Query 138363 TGTCTGATGTTTGTTTCAAATACACCATGAGTCGATGGATATGTAATCATAATACATGAG 138422 | || || || ||| || || |||| ||||||||||| || ||||| | ||| || Sbjct 445912 TCGCTAATCGTTTCTTCGAACACTCCATTCGTCGATGGATACGTGATCATCAGACACGAC 445971 Query 138423 AG 138424 || Sbjct 445972 AG 445973 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 578964941129960