Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Trachymyrmex_20zeteki_20[refseq_20GCF_5F001594055.1_202016-03-31] 4,623 sequences; 267,973,152 total letters Query= NC_020852.1 Length=186468 Score E Sequences producing significant alignments: (Bits) Value seq4212 82.4 9e-11 >seq4212 Length=4365329 Score = 82.4 bits (90), Expect = 9e-11 Identities = 222/337 (66%), Gaps = 2/337 (1%) Strand=Plus/Plus Query 75884 GCTATTCTCAAATCACAGACGGAGACTGGAACACCATATATGCTTTACAAGGATGCTTGT 75943 || ||||||| || || || ||||||||||| |||||||||||||| ||| ||| Sbjct 3415349 GCCATTCTCAGGTCCCAAGTAGAAACTGGAACACCTTATATGCTTTACAAAGATCATTGC 3415408 Query 75944 AACAAGAAGAGTAACCAAAAGAATTTGGGAACAATCAAGAGCTCAAATCTTTGCACGGAA 76003 || || || || || || | || || ||||| || || | ||||| ||| Sbjct 3415409 AATCGAAAATCAAATCATCAGCATATAGGCACTATCAAATGCAGCAACTTGTGCACCGAA 3415468 Query 76004 ATTTTAGAGTACACAGAT-AAGGATGAGACGGCTGTTTGCAATTTGGCATCAATCGCCCT 76062 ||| | || ||| | | | ||| || | ||||| |||||||| ||||| ||||| | Sbjct 3415469 ATTATTGAATACTCTGGTCCTGGAGAAGTC-GCTGTATGCAATTTAGCATCTATCGCTGT 3415527 Query 76063 TCCAAAGTATGTCAATGAAGAGACTCGCACTTTTGATTATGAAAAACTTCATGAAATCAC 76122 | || || ||| ||| || ||||| |||| || |||||| | | || | Sbjct 3415528 CAACATGTTCGTTAATATAGACACCAAAACTTTCGATTTCGATAAACTTAAAACAGTCGC 3415587 Query 76123 AAAGATTGTTACCAAAAATCTAAACCGAGTCATTGACAGAAATTTTTATCCCGTTGAGAC 76182 || | ||||| |||||| | |||||||||| || |||||||| | || Sbjct 3415588 GAAAGTCGTTACTCGTAATCTAGATAAAGTCATTGACGTTAACTTTTATCCTATCGAAGA 3415647 Query 76183 TGCGCGAAAGTCTAATATGCGACACAGACCTATTGGT 76219 || || |||||| |||||||||||||||| Sbjct 3415648 AACGAAAACATCTAATCGTAAACACAGACCTATTGGT 3415684 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 596535125734240