Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Trachymyrmex_20zeteki_20[refseq_20GCF_5F001594055.1_202016-03-31] 4,623 sequences; 267,973,152 total letters Query= NC_021246.1 Length=281182 Score E Sequences producing significant alignments: (Bits) Value seq3876 161 2e-34 seq4552 129 1e-24 >seq3876 Length=890137 Score = 161 bits (178), Expect = 2e-34 Identities = 172/227 (76%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 193134 CCACCTCTCAATCGAAGTACCAGATGCAATGTAGCCTCTTTAGAAATATTATAGTCGGAT 193193 || ||||| | ||||||||| || || | ||||| |||||| |||||||||||||||| Sbjct 519694 CCGCCTCTAAGTCGAAGTACAAGGTGAAGTGTAGACTCTTTCTGAATATTATAGTCGGAT 519753 Query 193194 AACGTTCTAGAATCGTCTAATTGTTTTCCGGCAAAAATTAATCTCTGTTGATCAGGAGGT 193253 || || | ||| |||| || || || || ||||| | ||| |||||||| ||||| Sbjct 519754 AAAGTCCGTCCATCCTCTAGCTGCTTGCCCGCGAAAATCAGTCTTTGTTGATCGGGAGGA 519813 Query 193254 ATTCCTTCTTTATCTTGTATTTTGGTTTTTATATTTAAAATAGTATCGGAAGACTCAACT 193313 || ||||||||||| || ||||| | ||| | ||| || || || |||| |||||| Sbjct 519814 ATGCCTTCTTTATCCTGAATTTTCGCTTTCACGTTTTCGATCGTGTCCGAAGCCTCAACC 519873 Query 193314 TCTAGAGTTATAGTTTTACCTGTTAGCGTTTTTACAAATATTTGCAT 193360 || || || ||||||||||| || || || || ||||| || ||||| Sbjct 519874 TCCAGTGTGATAGTTTTACCAGTGAGAGTCTTGACAAAAATCTGCAT 519920 Score = 150 bits (166), Expect = 3e-31 Identities = 176/238 (74%), Gaps = 0/238 (0%) Strand=Plus/Plus Query 193124 AATTTATATACCACCTCTCAATCGAAGTACCAGATGCAATGTAGCCTCTTTAGAAATATT 193183 ||||| |||||||| | || || || |||| ||||| ||| | ||||| ||| || Sbjct 521280 AATTTGCATACCACCACGTAAACGGAGAACCAAATGCAGTGTGGATTCTTTTTGAATGTT 521339 Query 193184 ATAGTCGGATAACGTTCTAGAATCGTCTAATTGTTTTCCGGCAAAAATTAATCTCTGTTG 193243 ||||| || | || | ||| || | ||||||||||| ||||| |||||||| || Sbjct 521340 GTAGTCAGAAAGAGTGCGGCCATCTTCAAGCTGTTTTCCGGCGAAAATCAATCTCTGCTG 521399 Query 193244 ATCAGGAGGTATTCCTTCTTTATCTTGTATTTTGGTTTTTATATTTAAAATAGTATCGGA 193303 ||| ||||| ||||||||||| ||||| ||||| | ||| | |||| || || || || Sbjct 521400 ATCTGGAGGGATTCCTTCTTTGTCTTGAATTTTTGCTTTGACATTTTCGATCGTGTCAGA 521459 Query 193304 AGACTCAACTTCTAGAGTTATAGTTTTACCTGTTAGCGTTTTTACAAATATTTGCATT 193361 | ||| ||||| | || || ||||| ||||| || ||||| ||||| || |||||| Sbjct 521460 TGCCTCGACTTCCAACGTGATGGTTTTTCCTGTCAGGGTTTTGACAAAGATCTGCATT 521517 Score = 134 bits (148), Expect = 2e-26 Identities = 172/237 (73%), Gaps = 0/237 (0%) Strand=Plus/Plus Query 193124 AATTTATATACCACCTCTCAATCGAAGTACCAGATGCAATGTAGCCTCTTTAGAAATATT 193183 ||||| |||||||| | || || || |||| ||||| ||| | ||||| ||| || Sbjct 521052 AATTTGCATACCACCACGTAAACGGAGAACCAAATGCAGTGTGGATTCTTTTTGAATGTT 521111 Query 193184 ATAGTCGGATAACGTTCTAGAATCGTCTAATTGTTTTCCGGCAAAAATTAATCTCTGTTG 193243 ||||| || | || | ||| || | ||||||||||| || || |||||||| || Sbjct 521112 GTAGTCAGAAAGAGTGCGGCCATCTTCAAGCTGTTTTCCGGCGAAGATCAATCTCTGCTG 521171 Query 193244 ATCAGGAGGTATTCCTTCTTTATCTTGTATTTTGGTTTTTATATTTAAAATAGTATCGGA 193303 ||| ||||| ||||||||||| ||||| ||||| | ||| | |||| || || || || Sbjct 521172 ATCTGGAGGGATTCCTTCTTTGTCTTGAATTTTTGCTTTGACATTTTCGATCGTGTCAGA 521231 Query 193304 AGACTCAACTTCTAGAGTTATAGTTTTACCTGTTAGCGTTTTTACAAATATTTGCAT 193360 | ||| ||||| | || || ||||| || || | ||||| || || |||||||| Sbjct 521232 TGCCTCGACTTCCAACGTGATGGTTTTTCCGGTCAATGTTTTGACGAAAATTTGCAT 521288 Score = 131 bits (144), Expect = 3e-25 Identities = 171/237 (72%), Gaps = 0/237 (0%) Strand=Plus/Plus Query 193124 AATTTATATACCACCTCTCAATCGAAGTACCAGATGCAATGTAGCCTCTTTAGAAATATT 193183 ||||| |||||||| | || || || |||| ||||| ||| | || || |||||| Sbjct 520824 AATTTGCATACCACCACGTAAACGGAGAACCAAATGCAGTGTGGATTCCTTCTGAATATT 520883 Query 193184 ATAGTCGGATAACGTTCTAGAATCGTCTAATTGTTTTCCGGCAAAAATTAATCTCTGTTG 193243 ||||| || | || | ||| || | |||||||| ||||| || ||||| || || Sbjct 520884 GTAGTCAGAAAGTGTGCGGCCATCTTCAAGCTGTTTTCCAGCAAAGATCAATCTTTGCTG 520943 Query 193244 ATCAGGAGGTATTCCTTCTTTATCTTGTATTTTGGTTTTTATATTTAAAATAGTATCGGA 193303 ||| ||||| ||||||||||| ||||| ||||| | ||| | |||| || || || || Sbjct 520944 ATCCGGAGGGATTCCTTCTTTGTCTTGAATTTTTGCTTTGACATTTTCGATCGTGTCAGA 521003 Query 193304 AGACTCAACTTCTAGAGTTATAGTTTTACCTGTTAGCGTTTTTACAAATATTTGCAT 193360 | ||||||||| | || || || || || || | ||||| || || |||||||| Sbjct 521004 TGCCTCAACTTCCAACGTGATGGTCTTTCCGGTCAATGTTTTGACGAAAATTTGCAT 521060 Score = 125 bits (138), Expect = 1e-23 Identities = 153/209 (73%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 193152 ACCAGATGCAATGTAGCCTCTTTAGAAATATTATAGTCGGATAACGTTCTAGAATCGTCT 193211 |||| ||||| |||| || || ||| ||||| || || | ||| | || || Sbjct 519940 ACCAAATGCAGGGTAGATTCCTTCTGAATGTTATAATCAGAAAGCGTACGGCCGTCTTCG 519999 Query 193212 AATTGTTTTCCGGCAAAAATTAATCTCTGTTGATCAGGAGGTATTCCTTCTTTATCTTGT 193271 | |||||||||||||| || || ||||| ||||| ||||| || |||||||||||||| Sbjct 520000 AGCTGTTTTCCGGCAAAGATCAACCTCTGCTGATCGGGAGGAATGCCTTCTTTATCTTGA 520059 Query 193272 ATTTTGGTTTTTATATTTAAAATAGTATCGGAAGACTCAACTTCTAGAGTTATAGTTTTA 193331 ||||| | || | ||| || || || |||| |||||| || || || ||||||||| Sbjct 520060 ATTTTCGCCTTCACGTTTTCGATCGTGTCCGAAGCCTCAACCTCCAGTGTGATAGTTTTA 520119 Query 193332 CCTGTTAGCGTTTTTACAAATATTTGCAT 193360 || || || || || ||||| || ||||| Sbjct 520120 CCAGTGAGAGTCTTGACAAAAATCTGCAT 520148 Score = 122 bits (134), Expect = 2e-22 Identities = 169/237 (71%), Gaps = 0/237 (0%) Strand=Plus/Plus Query 193124 AATTTATATACCACCTCTCAATCGAAGTACCAGATGCAATGTAGCCTCTTTAGAAATATT 193183 ||||| || ||||| | || ||||| |||| |||||| || | || || ||| || Sbjct 520368 AATTTGCATTCCACCACGTAAACGAAGAACCAAATGCAAAGTCGATTCCTTCTGAATGTT 520427 Query 193184 ATAGTCGGATAACGTTCTAGAATCGTCTAATTGTTTTCCGGCAAAAATTAATCTCTGTTG 193243 ||| || || | || | | || || | ||||||||||| || || || ||||| || Sbjct 520428 ATAATCTGAAAGTGTGCGACCGTCTTCAAGCTGTTTTCCGGCGAAGATCAACCTCTGCTG 520487 Query 193244 ATCAGGAGGTATTCCTTCTTTATCTTGTATTTTGGTTTTTATATTTAAAATAGTATCGGA 193303 || || || |||||||| || || || ||||| | ||| | || ||| || || || Sbjct 520488 GTCCGGGGGGATTCCTTCCTTGTCCTGAATTTTTGCTTTCACGTTCTCAATCGTGTCCGA 520547 Query 193304 AGACTCAACTTCTAGAGTTATAGTTTTACCTGTTAGCGTTTTTACAAATATTTGCAT 193360 | || ||||| ||||| || || ||||| || |||||||| ||||| |||||||| Sbjct 520548 CGCTTCGACTTCCAGAGTGATTGTCTTACCGGTGAGCGTTTTGACAAAAATTTGCAT 520604 Score = 113 bits (124), Expect = 8e-20 Identities = 148/205 (72%), Gaps = 0/205 (0%) Strand=Plus/Plus Query 193157 ATGCAATGTAGCCTCTTTAGAAATATTATAGTCGGATAACGTTCTAGAATCGTCTAATTG 193216 ||||| |||| || || ||| ||||| || || | ||| | || || | || Sbjct 520173 ATGCAGGGTAGATTCCTTCTGAATGTTATAATCAGAAAGCGTACGGCCGTCTTCGAGCTG 520232 Query 193217 TTTTCCGGCAAAAATTAATCTCTGTTGATCAGGAGGTATTCCTTCTTTATCTTGTATTTT 193276 |||||||||||| || || ||||| ||||| ||||| |||||||| || ||||| ||||| Sbjct 520233 TTTTCCGGCAAAGATCAACCTCTGCTGATCTGGAGGGATTCCTTCCTTGTCTTGAATTTT 520292 Query 193277 GGTTTTTATATTTAAAATAGTATCGGAAGACTCAACTTCTAGAGTTATAGTTTTACCTGT 193336 || ||| | ||| || || || || | ||||||||| | || || || || ||||| Sbjct 520293 GGCTTTGACATTCTCGATCGTGTCCGACGCCTCAACTTCCAACGTGATGGTCTTTCCTGT 520352 Query 193337 TAGCGTTTTTACAAATATTTGCATT 193361 || || || || || ||||||||| Sbjct 520353 TAATGTCTTGACGAAAATTTGCATT 520377 Score = 98.7 bits (108), Expect = 2e-15 Identities = 164/237 (69%), Gaps = 0/237 (0%) Strand=Plus/Plus Query 193124 AATTTATATACCACCTCTCAATCGAAGTACCAGATGCAATGTAGCCTCTTTAGAAATATT 193183 ||||| |||||||| | | | | |||| ||||||||| | || || ||| || Sbjct 520596 AATTTGCATACCACCGCGAAGCCTTAAAACCAAATGCAATGTGGATTCCTTTTGAATGTT 520655 Query 193184 ATAGTCGGATAACGTTCTAGAATCGTCTAATTGTTTTCCGGCAAAAATTAATCTCTGTTG 193243 ||||| || | || | ||| || | ||||||||||| || || || ||||| || Sbjct 520656 GTAGTCAGAAAGGGTACGGCCATCTTCAAGCTGTTTTCCGGCGAAGATCAACCTCTGCTG 520715 Query 193244 ATCAGGAGGTATTCCTTCTTTATCTTGTATTTTGGTTTTTATATTTAAAATAGTATCGGA 193303 || ||||| |||||||| || || || ||||| | ||| | || ||| || || || Sbjct 520716 GTCCGGAGGGATTCCTTCCTTGTCCTGAATTTTTGCTTTCACGTTCTCAATCGTGTCAGA 520775 Query 193304 AGACTCAACTTCTAGAGTTATAGTTTTACCTGTTAGCGTTTTTACAAATATTTGCAT 193360 | ||||||||| | || || || || || || | ||||| || || |||||||| Sbjct 520776 TGCCTCAACTTCCAATGTGATGGTCTTTCCGGTCAATGTTTTGACGAAAATTTGCAT 520832 >seq4552 Length=86203 Score = 129 bits (142), Expect = 1e-24 Identities = 148/199 (74%), Gaps = 0/199 (0%) Strand=Plus/Minus Query 193163 TGTAGCCTCTTTAGAAATATTATAGTCGGATAACGTTCTAGAATCGTCTAATTGTTTTCC 193222 ||||| ||||| || || || || || | ||||| || || | ||| || || Sbjct 4441 TGTAGATTCTTTTTGGATGTTGTAATCAGAAAGAGTTCTGCCGTCTTCCAGTTGCTTGCC 4382 Query 193223 GGCAAAAATTAATCTCTGTTGATCAGGAGGTATTCCTTCTTTATCTTGTATTTTGGTTTT 193282 || || ||||| | ||||||||| ||||| ||||||||||| || || ||||||| || Sbjct 4381 AGCGAAGATTAAACGCTGTTGATCTGGAGGGATTCCTTCTTTGTCCTGAATTTTGGCCTT 4322 Query 193283 TATATTTAAAATAGTATCGGAAGACTCAACTTCTAGAGTTATAGTTTTACCTGTTAGCGT 193342 | ||| |||||| || |||| || ||||| ||||| || ||||||||||| || || Sbjct 4321 CACGTTTTCAATAGTGTCTGAAGCTTCGACTTCAAGAGTGATGGTTTTACCTGTGAGAGT 4262 Query 193343 TTTTACAAATATTTGCATT 193361 ||| ||||| ||||||||| Sbjct 4261 TTTCACAAAAATTTGCATT 4243 Score = 118 bits (130), Expect = 2e-21 Identities = 155/215 (72%), Gaps = 0/215 (0%) Strand=Plus/Minus Query 193146 CGAAGTACCAGATGCAATGTAGCCTCTTTAGAAATATTATAGTCGGATAACGTTCTAGAA 193205 || || || ||||| | ||||| || || || || || ||||| | ||||| | Sbjct 3318 CGCAGAACAAGATGAAGTGTAGATTCCTTCTGGATGTTGTAATCGGAAAGGGTTCTGCCA 3259 Query 193206 TCGTCTAATTGTTTTCCGGCAAAAATTAATCTCTGTTGATCAGGAGGTATTCCTTCTTTA 193265 || |||| ||| ||||| ||||| ||||| | || ||||| ||||| || |||||||| Sbjct 3258 TCCTCTAGTTGCTTTCCAGCAAAGATTAAACGTTGCTGATCTGGAGGAATACCTTCTTTG 3199 Query 193266 TCTTGTATTTTGGTTTTTATATTTAAAATAGTATCGGAAGACTCAACTTCTAGAGTTATA 193325 ||||| || || | ||| | || ||||| || |||| || || || || || || Sbjct 3198 TCTTGGATCTTAGCTTTGACGTTCTCTATAGTGTCAGAAGCTTCCACCTCAAGGGTGATG 3139 Query 193326 GTTTTACCTGTTAGCGTTTTTACAAATATTTGCAT 193360 ||||| || || || ||||||||||| |||||||| Sbjct 3138 GTTTTCCCAGTGAGGGTTTTTACAAAGATTTGCAT 3104 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 899602411221360