Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Trachymyrmex_20zeteki_20[refseq_20GCF_5F001594055.1_202016-03-31]
4,623 sequences; 267,973,152 total letters
Query= NC_021246.1
Length=281182
Score E
Sequences producing significant alignments: (Bits) Value
seq3876 161 2e-34
seq4552 129 1e-24
>seq3876
Length=890137
Score = 161 bits (178), Expect = 2e-34
Identities = 172/227 (76%), Gaps = 0/227 (0%)
Strand=Plus/Plus
Query 193134 CCACCTCTCAATCGAAGTACCAGATGCAATGTAGCCTCTTTAGAAATATTATAGTCGGAT 193193
|| ||||| | ||||||||| || || | ||||| |||||| ||||||||||||||||
Sbjct 519694 CCGCCTCTAAGTCGAAGTACAAGGTGAAGTGTAGACTCTTTCTGAATATTATAGTCGGAT 519753
Query 193194 AACGTTCTAGAATCGTCTAATTGTTTTCCGGCAAAAATTAATCTCTGTTGATCAGGAGGT 193253
|| || | ||| |||| || || || || ||||| | ||| |||||||| |||||
Sbjct 519754 AAAGTCCGTCCATCCTCTAGCTGCTTGCCCGCGAAAATCAGTCTTTGTTGATCGGGAGGA 519813
Query 193254 ATTCCTTCTTTATCTTGTATTTTGGTTTTTATATTTAAAATAGTATCGGAAGACTCAACT 193313
|| ||||||||||| || ||||| | ||| | ||| || || || |||| ||||||
Sbjct 519814 ATGCCTTCTTTATCCTGAATTTTCGCTTTCACGTTTTCGATCGTGTCCGAAGCCTCAACC 519873
Query 193314 TCTAGAGTTATAGTTTTACCTGTTAGCGTTTTTACAAATATTTGCAT 193360
|| || || ||||||||||| || || || || ||||| || |||||
Sbjct 519874 TCCAGTGTGATAGTTTTACCAGTGAGAGTCTTGACAAAAATCTGCAT 519920
Score = 150 bits (166), Expect = 3e-31
Identities = 176/238 (74%), Gaps = 0/238 (0%)
Strand=Plus/Plus
Query 193124 AATTTATATACCACCTCTCAATCGAAGTACCAGATGCAATGTAGCCTCTTTAGAAATATT 193183
||||| |||||||| | || || || |||| ||||| ||| | ||||| ||| ||
Sbjct 521280 AATTTGCATACCACCACGTAAACGGAGAACCAAATGCAGTGTGGATTCTTTTTGAATGTT 521339
Query 193184 ATAGTCGGATAACGTTCTAGAATCGTCTAATTGTTTTCCGGCAAAAATTAATCTCTGTTG 193243
||||| || | || | ||| || | ||||||||||| ||||| |||||||| ||
Sbjct 521340 GTAGTCAGAAAGAGTGCGGCCATCTTCAAGCTGTTTTCCGGCGAAAATCAATCTCTGCTG 521399
Query 193244 ATCAGGAGGTATTCCTTCTTTATCTTGTATTTTGGTTTTTATATTTAAAATAGTATCGGA 193303
||| ||||| ||||||||||| ||||| ||||| | ||| | |||| || || || ||
Sbjct 521400 ATCTGGAGGGATTCCTTCTTTGTCTTGAATTTTTGCTTTGACATTTTCGATCGTGTCAGA 521459
Query 193304 AGACTCAACTTCTAGAGTTATAGTTTTACCTGTTAGCGTTTTTACAAATATTTGCATT 193361
| ||| ||||| | || || ||||| ||||| || ||||| ||||| || ||||||
Sbjct 521460 TGCCTCGACTTCCAACGTGATGGTTTTTCCTGTCAGGGTTTTGACAAAGATCTGCATT 521517
Score = 134 bits (148), Expect = 2e-26
Identities = 172/237 (73%), Gaps = 0/237 (0%)
Strand=Plus/Plus
Query 193124 AATTTATATACCACCTCTCAATCGAAGTACCAGATGCAATGTAGCCTCTTTAGAAATATT 193183
||||| |||||||| | || || || |||| ||||| ||| | ||||| ||| ||
Sbjct 521052 AATTTGCATACCACCACGTAAACGGAGAACCAAATGCAGTGTGGATTCTTTTTGAATGTT 521111
Query 193184 ATAGTCGGATAACGTTCTAGAATCGTCTAATTGTTTTCCGGCAAAAATTAATCTCTGTTG 193243
||||| || | || | ||| || | ||||||||||| || || |||||||| ||
Sbjct 521112 GTAGTCAGAAAGAGTGCGGCCATCTTCAAGCTGTTTTCCGGCGAAGATCAATCTCTGCTG 521171
Query 193244 ATCAGGAGGTATTCCTTCTTTATCTTGTATTTTGGTTTTTATATTTAAAATAGTATCGGA 193303
||| ||||| ||||||||||| ||||| ||||| | ||| | |||| || || || ||
Sbjct 521172 ATCTGGAGGGATTCCTTCTTTGTCTTGAATTTTTGCTTTGACATTTTCGATCGTGTCAGA 521231
Query 193304 AGACTCAACTTCTAGAGTTATAGTTTTACCTGTTAGCGTTTTTACAAATATTTGCAT 193360
| ||| ||||| | || || ||||| || || | ||||| || || ||||||||
Sbjct 521232 TGCCTCGACTTCCAACGTGATGGTTTTTCCGGTCAATGTTTTGACGAAAATTTGCAT 521288
Score = 131 bits (144), Expect = 3e-25
Identities = 171/237 (72%), Gaps = 0/237 (0%)
Strand=Plus/Plus
Query 193124 AATTTATATACCACCTCTCAATCGAAGTACCAGATGCAATGTAGCCTCTTTAGAAATATT 193183
||||| |||||||| | || || || |||| ||||| ||| | || || ||||||
Sbjct 520824 AATTTGCATACCACCACGTAAACGGAGAACCAAATGCAGTGTGGATTCCTTCTGAATATT 520883
Query 193184 ATAGTCGGATAACGTTCTAGAATCGTCTAATTGTTTTCCGGCAAAAATTAATCTCTGTTG 193243
||||| || | || | ||| || | |||||||| ||||| || ||||| || ||
Sbjct 520884 GTAGTCAGAAAGTGTGCGGCCATCTTCAAGCTGTTTTCCAGCAAAGATCAATCTTTGCTG 520943
Query 193244 ATCAGGAGGTATTCCTTCTTTATCTTGTATTTTGGTTTTTATATTTAAAATAGTATCGGA 193303
||| ||||| ||||||||||| ||||| ||||| | ||| | |||| || || || ||
Sbjct 520944 ATCCGGAGGGATTCCTTCTTTGTCTTGAATTTTTGCTTTGACATTTTCGATCGTGTCAGA 521003
Query 193304 AGACTCAACTTCTAGAGTTATAGTTTTACCTGTTAGCGTTTTTACAAATATTTGCAT 193360
| ||||||||| | || || || || || || | ||||| || || ||||||||
Sbjct 521004 TGCCTCAACTTCCAACGTGATGGTCTTTCCGGTCAATGTTTTGACGAAAATTTGCAT 521060
Score = 125 bits (138), Expect = 1e-23
Identities = 153/209 (73%), Gaps = 0/209 (0%)
Strand=Plus/Plus
Query 193152 ACCAGATGCAATGTAGCCTCTTTAGAAATATTATAGTCGGATAACGTTCTAGAATCGTCT 193211
|||| ||||| |||| || || ||| ||||| || || | ||| | || ||
Sbjct 519940 ACCAAATGCAGGGTAGATTCCTTCTGAATGTTATAATCAGAAAGCGTACGGCCGTCTTCG 519999
Query 193212 AATTGTTTTCCGGCAAAAATTAATCTCTGTTGATCAGGAGGTATTCCTTCTTTATCTTGT 193271
| |||||||||||||| || || ||||| ||||| ||||| || ||||||||||||||
Sbjct 520000 AGCTGTTTTCCGGCAAAGATCAACCTCTGCTGATCGGGAGGAATGCCTTCTTTATCTTGA 520059
Query 193272 ATTTTGGTTTTTATATTTAAAATAGTATCGGAAGACTCAACTTCTAGAGTTATAGTTTTA 193331
||||| | || | ||| || || || |||| |||||| || || || |||||||||
Sbjct 520060 ATTTTCGCCTTCACGTTTTCGATCGTGTCCGAAGCCTCAACCTCCAGTGTGATAGTTTTA 520119
Query 193332 CCTGTTAGCGTTTTTACAAATATTTGCAT 193360
|| || || || || ||||| || |||||
Sbjct 520120 CCAGTGAGAGTCTTGACAAAAATCTGCAT 520148
Score = 122 bits (134), Expect = 2e-22
Identities = 169/237 (71%), Gaps = 0/237 (0%)
Strand=Plus/Plus
Query 193124 AATTTATATACCACCTCTCAATCGAAGTACCAGATGCAATGTAGCCTCTTTAGAAATATT 193183
||||| || ||||| | || ||||| |||| |||||| || | || || ||| ||
Sbjct 520368 AATTTGCATTCCACCACGTAAACGAAGAACCAAATGCAAAGTCGATTCCTTCTGAATGTT 520427
Query 193184 ATAGTCGGATAACGTTCTAGAATCGTCTAATTGTTTTCCGGCAAAAATTAATCTCTGTTG 193243
||| || || | || | | || || | ||||||||||| || || || ||||| ||
Sbjct 520428 ATAATCTGAAAGTGTGCGACCGTCTTCAAGCTGTTTTCCGGCGAAGATCAACCTCTGCTG 520487
Query 193244 ATCAGGAGGTATTCCTTCTTTATCTTGTATTTTGGTTTTTATATTTAAAATAGTATCGGA 193303
|| || || |||||||| || || || ||||| | ||| | || ||| || || ||
Sbjct 520488 GTCCGGGGGGATTCCTTCCTTGTCCTGAATTTTTGCTTTCACGTTCTCAATCGTGTCCGA 520547
Query 193304 AGACTCAACTTCTAGAGTTATAGTTTTACCTGTTAGCGTTTTTACAAATATTTGCAT 193360
| || ||||| ||||| || || ||||| || |||||||| ||||| ||||||||
Sbjct 520548 CGCTTCGACTTCCAGAGTGATTGTCTTACCGGTGAGCGTTTTGACAAAAATTTGCAT 520604
Score = 113 bits (124), Expect = 8e-20
Identities = 148/205 (72%), Gaps = 0/205 (0%)
Strand=Plus/Plus
Query 193157 ATGCAATGTAGCCTCTTTAGAAATATTATAGTCGGATAACGTTCTAGAATCGTCTAATTG 193216
||||| |||| || || ||| ||||| || || | ||| | || || | ||
Sbjct 520173 ATGCAGGGTAGATTCCTTCTGAATGTTATAATCAGAAAGCGTACGGCCGTCTTCGAGCTG 520232
Query 193217 TTTTCCGGCAAAAATTAATCTCTGTTGATCAGGAGGTATTCCTTCTTTATCTTGTATTTT 193276
|||||||||||| || || ||||| ||||| ||||| |||||||| || ||||| |||||
Sbjct 520233 TTTTCCGGCAAAGATCAACCTCTGCTGATCTGGAGGGATTCCTTCCTTGTCTTGAATTTT 520292
Query 193277 GGTTTTTATATTTAAAATAGTATCGGAAGACTCAACTTCTAGAGTTATAGTTTTACCTGT 193336
|| ||| | ||| || || || || | ||||||||| | || || || || |||||
Sbjct 520293 GGCTTTGACATTCTCGATCGTGTCCGACGCCTCAACTTCCAACGTGATGGTCTTTCCTGT 520352
Query 193337 TAGCGTTTTTACAAATATTTGCATT 193361
|| || || || || |||||||||
Sbjct 520353 TAATGTCTTGACGAAAATTTGCATT 520377
Score = 98.7 bits (108), Expect = 2e-15
Identities = 164/237 (69%), Gaps = 0/237 (0%)
Strand=Plus/Plus
Query 193124 AATTTATATACCACCTCTCAATCGAAGTACCAGATGCAATGTAGCCTCTTTAGAAATATT 193183
||||| |||||||| | | | | |||| ||||||||| | || || ||| ||
Sbjct 520596 AATTTGCATACCACCGCGAAGCCTTAAAACCAAATGCAATGTGGATTCCTTTTGAATGTT 520655
Query 193184 ATAGTCGGATAACGTTCTAGAATCGTCTAATTGTTTTCCGGCAAAAATTAATCTCTGTTG 193243
||||| || | || | ||| || | ||||||||||| || || || ||||| ||
Sbjct 520656 GTAGTCAGAAAGGGTACGGCCATCTTCAAGCTGTTTTCCGGCGAAGATCAACCTCTGCTG 520715
Query 193244 ATCAGGAGGTATTCCTTCTTTATCTTGTATTTTGGTTTTTATATTTAAAATAGTATCGGA 193303
|| ||||| |||||||| || || || ||||| | ||| | || ||| || || ||
Sbjct 520716 GTCCGGAGGGATTCCTTCCTTGTCCTGAATTTTTGCTTTCACGTTCTCAATCGTGTCAGA 520775
Query 193304 AGACTCAACTTCTAGAGTTATAGTTTTACCTGTTAGCGTTTTTACAAATATTTGCAT 193360
| ||||||||| | || || || || || || | ||||| || || ||||||||
Sbjct 520776 TGCCTCAACTTCCAATGTGATGGTCTTTCCGGTCAATGTTTTGACGAAAATTTGCAT 520832
>seq4552
Length=86203
Score = 129 bits (142), Expect = 1e-24
Identities = 148/199 (74%), Gaps = 0/199 (0%)
Strand=Plus/Minus
Query 193163 TGTAGCCTCTTTAGAAATATTATAGTCGGATAACGTTCTAGAATCGTCTAATTGTTTTCC 193222
||||| ||||| || || || || || | ||||| || || | ||| || ||
Sbjct 4441 TGTAGATTCTTTTTGGATGTTGTAATCAGAAAGAGTTCTGCCGTCTTCCAGTTGCTTGCC 4382
Query 193223 GGCAAAAATTAATCTCTGTTGATCAGGAGGTATTCCTTCTTTATCTTGTATTTTGGTTTT 193282
|| || ||||| | ||||||||| ||||| ||||||||||| || || ||||||| ||
Sbjct 4381 AGCGAAGATTAAACGCTGTTGATCTGGAGGGATTCCTTCTTTGTCCTGAATTTTGGCCTT 4322
Query 193283 TATATTTAAAATAGTATCGGAAGACTCAACTTCTAGAGTTATAGTTTTACCTGTTAGCGT 193342
| ||| |||||| || |||| || ||||| ||||| || ||||||||||| || ||
Sbjct 4321 CACGTTTTCAATAGTGTCTGAAGCTTCGACTTCAAGAGTGATGGTTTTACCTGTGAGAGT 4262
Query 193343 TTTTACAAATATTTGCATT 193361
||| ||||| |||||||||
Sbjct 4261 TTTCACAAAAATTTGCATT 4243
Score = 118 bits (130), Expect = 2e-21
Identities = 155/215 (72%), Gaps = 0/215 (0%)
Strand=Plus/Minus
Query 193146 CGAAGTACCAGATGCAATGTAGCCTCTTTAGAAATATTATAGTCGGATAACGTTCTAGAA 193205
|| || || ||||| | ||||| || || || || || ||||| | ||||| |
Sbjct 3318 CGCAGAACAAGATGAAGTGTAGATTCCTTCTGGATGTTGTAATCGGAAAGGGTTCTGCCA 3259
Query 193206 TCGTCTAATTGTTTTCCGGCAAAAATTAATCTCTGTTGATCAGGAGGTATTCCTTCTTTA 193265
|| |||| ||| ||||| ||||| ||||| | || ||||| ||||| || ||||||||
Sbjct 3258 TCCTCTAGTTGCTTTCCAGCAAAGATTAAACGTTGCTGATCTGGAGGAATACCTTCTTTG 3199
Query 193266 TCTTGTATTTTGGTTTTTATATTTAAAATAGTATCGGAAGACTCAACTTCTAGAGTTATA 193325
||||| || || | ||| | || ||||| || |||| || || || || || ||
Sbjct 3198 TCTTGGATCTTAGCTTTGACGTTCTCTATAGTGTCAGAAGCTTCCACCTCAAGGGTGATG 3139
Query 193326 GTTTTACCTGTTAGCGTTTTTACAAATATTTGCAT 193360
||||| || || || ||||||||||| ||||||||
Sbjct 3138 GTTTTCCCAGTGAGGGTTTTTACAAAGATTTGCAT 3104
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 899602411221360
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