Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Trachymyrmex_20zeteki_20[refseq_20GCF_5F001594055.1_202016-03-31]
4,623 sequences; 267,973,152 total letters
Query= NC_021247.1
Length=228750
Score E
Sequences producing significant alignments: (Bits) Value
seq3876 134 2e-26
seq4552 111 2e-19
seq3537 98.7 1e-15
>seq3876
Length=890137
Score = 134 bits (148), Expect = 2e-26
Identities = 166/227 (73%), Gaps = 0/227 (0%)
Strand=Plus/Minus
Query 155823 ATGCAAATATTTATTAAAACATTGACTGGAAAAACTATTACATTAGAAGTCGAAGATTCT 155882
||||| || ||| | || || | ||||| |||||||| ||| | || || || | |||
Sbjct 519920 ATGCAGATTTTTGTCAAGACTCTCACTGGTAAAACTATCACACTGGAGGTTGAGGCTTCG 519861
Query 155883 GATAATATTTTAAACGTGAAAAATAAAATACAAGATAAAGAAGGCATACCTCCAGAACAA 155942
|| | || |||||||||| ||||| || |||||||||||||| ||||| || |||
Sbjct 519860 GACACGATCGAAAACGTGAAAGCGAAAATTCAGGATAAAGAAGGCATTCCTCCCGATCAA 519801
Query 155943 CAAAGATTGATTTATGCCGGTAAGCAGCTCGAAGATACCAGAACTTTATCAGATTATAAT 156002
|||||| |||||| || || |||||||| || ||| | |||||||| || ||||||
Sbjct 519800 CAAAGACTGATTTTCGCGGGCAAGCAGCTAGAGGATGGACGGACTTTATCCGACTATAAT 519741
Query 156003 ATATCCAAAGAGGCGACGCTTCATTTAGTGTTAAGATTAAGAGGCGG 156049
|| |||||| | || ||||| | || | || | ||||||||
Sbjct 519740 ATTCAGAAAGAGTCTACACTTCACCTTGTACTTCGACTTAGAGGCGG 519694
Score = 125 bits (138), Expect = 1e-23
Identities = 153/209 (73%), Gaps = 0/209 (0%)
Strand=Plus/Minus
Query 155823 ATGCAAATATTTATTAAAACATTGACTGGAAAAACTATTACATTAGAAGTCGAAGATTCT 155882
|||||||| || | ||||||||||| |||||||| || || || |||||||| | |||
Sbjct 521288 ATGCAAATTTTCGTCAAAACATTGACCGGAAAAACCATCACGTTGGAAGTCGAGGCATCT 521229
Query 155883 GATAATATTTTAAACGTGAAAAATAAAATACAAGATAAAGAAGGCATACCTCCAGAACAA 155942
|| | || ||| || ||| ||||| ||||| |||||||| || |||||||| ||
Sbjct 521228 GACACGATCGAAAATGTCAAAGCAAAAATTCAAGACAAAGAAGGAATCCCTCCAGATCAG 521169
Query 155943 CAAAGATTGATTTATGCCGGTAAGCAGCTCGAAGATACCAGAACTTTATCAGATTATAAT 156002
|| |||||||| | ||||| || ||||| |||||| | | ||| | || || || ||
Sbjct 521168 CAGAGATTGATCTTCGCCGGAAAACAGCTTGAAGATGGCCGCACTCTTTCTGACTACAAC 521109
Query 156003 ATATCCAAAGAGGCGACGCTTCATTTAGT 156031
|| ||||| | || || ||||| ||
Sbjct 521108 ATTCAAAAAGAATCCACACTGCATTTGGT 521080
Score = 114 bits (126), Expect = 2e-20
Identities = 162/228 (71%), Gaps = 0/228 (0%)
Strand=Plus/Minus
Query 155823 ATGCAAATATTTATTAAAACATTGACTGGAAAAACTATTACATTAGAAGTCGAAGATTCT 155882
||||| || ||| | || || | ||||| |||||||| ||| | || || || | |||
Sbjct 520148 ATGCAGATTTTTGTCAAGACTCTCACTGGTAAAACTATCACACTGGAGGTTGAGGCTTCG 520089
Query 155883 GATAATATTTTAAACGTGAAAAATAAAATACAAGATAAAGAAGGCATACCTCCAGAACAA 155942
|| | || ||||||||| ||||| ||||||||||||||||| ||||| || ||
Sbjct 520088 GACACGATCGAAAACGTGAAGGCGAAAATTCAAGATAAAGAAGGCATTCCTCCCGATCAG 520029
Query 155943 CAAAGATTGATTTATGCCGGTAAGCAGCTCGAAGATACCAGAACTTTATCAGATTATAAT 156002
|| || ||||| | |||||| || ||||||||||| | | || | || ||||||||
Sbjct 520028 CAGAGGTTGATCTTTGCCGGAAAACAGCTCGAAGACGGCCGTACGCTTTCTGATTATAAC 519969
Query 156003 ATATCCAAAGAGGCGACGCTTCATTTAGTGTTAAGATTAAGAGGCGGT 156050
|| || || | || || ||||| || || || | | ||||||
Sbjct 519968 ATTCAGAAGGAATCTACCCTGCATTTGGTTTTGAGGCTTCGCGGCGGT 519921
Score = 113 bits (124), Expect = 7e-20
Identities = 134/182 (74%), Gaps = 0/182 (0%)
Strand=Plus/Minus
Query 155823 ATGCAAATATTTATTAAAACATTGACTGGAAAAACTATTACATTAGAAGTCGAAGATTCT 155882
|||||||| || | ||||||||||| ||||| || || || || ||||| || | |||
Sbjct 521060 ATGCAAATTTTCGTCAAAACATTGACCGGAAAGACCATCACGTTGGAAGTTGAGGCATCT 521001
Query 155883 GATAATATTTTAAACGTGAAAAATAAAATACAAGATAAAGAAGGCATACCTCCAGAACAA 155942
|| | || ||| || ||| ||||| ||||| |||||||| || ||||| || ||
Sbjct 521000 GACACGATCGAAAATGTCAAAGCAAAAATTCAAGACAAAGAAGGAATCCCTCCGGATCAG 520941
Query 155943 CAAAGATTGATTTATGCCGGTAAGCAGCTCGAAGATACCAGAACTTTATCAGATTATAAT 156002
||||||||||| | ||| || || ||||| |||||| | | || | || || || |||
Sbjct 520940 CAAAGATTGATCTTTGCTGGAAAACAGCTTGAAGATGGCCGCACACTTTCTGACTACAAT 520881
Query 156003 AT 156004
||
Sbjct 520880 AT 520879
Score = 107 bits (118), Expect = 3e-18
Identities = 155/216 (72%), Gaps = 2/216 (1%)
Strand=Plus/Minus
Query 155823 ATGCAAATATTTATTAAAACATTGACTGGAAAAACTATTACATTAGAAGTCGAAGATTCT 155882
|||||||| || | ||||||||||| ||||| || || ||||| ||||| || | |||
Sbjct 520832 ATGCAAATTTTCGTCAAAACATTGACCGGAAAGACCATCACATTGGAAGTTGAGGCATCT 520773
Query 155883 GATAATATTTTAAACGTGAAAAATAAAATACAAGATAAAGAAGGCATACCTCCAGAACAA 155942
|| | ||| ||||||||| ||||| || || || ||||| || ||||| || ||
Sbjct 520772 GACACGATTGAGAACGTGAAAGCAAAAATTCAGGACAAGGAAGGAATCCCTCCGGACCAG 520713
Query 155943 CAAAGATTGATTTATGCCGGTAAGCAGCTCGAAGATACCAGAACTTTATCAGATTATAAT 156002
|| || ||||| | ||||| || ||||| |||||| | | || | || || || ||
Sbjct 520712 CAGAGGTTGATCTTCGCCGGAAAACAGCTTGAAGATGGCCGTACCCTTTCTGACTACAAC 520653
Query 156003 ATATCCAAA-GAGGCGACGCTTCATTTAGTGTTAAG 156037
|| || ||| || | || | ||||| || |||||
Sbjct 520652 AT-TCAAAAGGAATCCACATTGCATTTGGTTTTAAG 520618
Score = 102 bits (112), Expect = 1e-16
Identities = 160/229 (70%), Gaps = 0/229 (0%)
Strand=Plus/Minus
Query 155822 AATGCAAATATTTATTAAAACATTGACTGGAAAAACTATTACATTAGAAGTCGAAGATTC 155881
||||||||| || | || ||||| || ||||| || || || || ||||| || | ||
Sbjct 520377 AATGCAAATTTTCGTCAAGACATTAACAGGAAAGACCATCACGTTGGAAGTTGAGGCGTC 520318
Query 155882 TGATAATATTTTAAACGTGAAAAATAAAATACAAGATAAAGAAGGCATACCTCCAGAACA 155941
|| | || || || ||| ||||| ||||| || ||||| || |||||||| ||
Sbjct 520317 GGACACGATCGAGAATGTCAAAGCCAAAATTCAAGACAAGGAAGGAATCCCTCCAGATCA 520258
Query 155942 ACAAAGATTGATTTATGCCGGTAAGCAGCTCGAAGATACCAGAACTTTATCAGATTATAA 156001
|| || ||||| | |||||| || ||||||||||| | | || | || ||||||||
Sbjct 520257 GCAGAGGTTGATCTTTGCCGGAAAACAGCTCGAAGACGGCCGTACGCTTTCTGATTATAA 520198
Query 156002 TATATCCAAAGAGGCGACGCTTCATTTAGTGTTAAGATTAAGAGGCGGT 156050
|| || || | || || |||||||| || || | | ||||||
Sbjct 520197 CATTCAGAAGGAATCTACCCTGCATTTAGTTTTGAGGCTTCGCGGCGGT 520149
Score = 86.0 bits (94), Expect = 9e-12
Identities = 128/182 (70%), Gaps = 0/182 (0%)
Strand=Plus/Minus
Query 155823 ATGCAAATATTTATTAAAACATTGACTGGAAAAACTATTACATTAGAAGTCGAAGATTCT 155882
|||||||| ||| | ||||| | || || || || || || | |||||||||| ||
Sbjct 520604 ATGCAAATTTTTGTCAAAACGCTCACCGGTAAGACAATCACTCTGGAAGTCGAAGCGTCG 520545
Query 155883 GATAATATTTTAAACGTGAAAAATAAAATACAAGATAAAGAAGGCATACCTCCAGAACAA 155942
|| | ||| ||||||||| ||||| || || || ||||| || || || || ||
Sbjct 520544 GACACGATTGAGAACGTGAAAGCAAAAATTCAGGACAAGGAAGGAATCCCCCCGGACCAG 520485
Query 155943 CAAAGATTGATTTATGCCGGTAAGCAGCTCGAAGATACCAGAACTTTATCAGATTATAAT 156002
|| || ||||| | ||||| || ||||| ||||| | || | |||||||||||
Sbjct 520484 CAGAGGTTGATCTTCGCCGGAAAACAGCTTGAAGACGGTCGCACACTTTCAGATTATAAC 520425
Query 156003 AT 156004
||
Sbjct 520424 AT 520423
>seq4552
Length=86203
Score = 111 bits (122), Expect = 2e-19
Identities = 147/204 (72%), Gaps = 0/204 (0%)
Strand=Plus/Plus
Query 155823 ATGCAAATATTTATTAAAACATTGACTGGAAAAACTATTACATTAGAAGTCGAAGATTCT 155882
||||| || ||| | || || | || || ||||| || || | |||||||||| |||
Sbjct 3332 ATGCAGATCTTTGTGAAGACTCTTACGGGTAAAACCATCACCCTCGAAGTCGAAGCTTCA 3391
Query 155883 GATAATATTTTAAACGTGAAAAATAAAATACAAGATAAAGAAGGCATACCTCCAGAACAA 155942
|| | |||| ||| |||||| ||||| ||||| ||||| || || || || || ||
Sbjct 3392 GACACTATTGAAAATGTGAAAGCCAAAATCCAAGACAAAGAGGGAATTCCCCCGGATCAG 3451
Query 155943 CAAAGATTGATTTATGCCGGTAAGCAGCTCGAAGATACCAGAACTTTATCAGATTATAAT 156002
|| | |||||| ||| || || || || |||||| ||||||| | || |||||||||
Sbjct 3452 CAGCGTCTGATTTTTGCTGGCAAACAACTTGAAGATGGCAGAACTCTCTCTGATTATAAT 3511
Query 156003 ATATCCAAAGAGGCGACGCTTCAT 156026
|| ||||| | || ||||||
Sbjct 3512 ATTCAAAAAGAATCCACACTTCAT 3535
Score = 104 bits (114), Expect = 3e-17
Identities = 146/205 (71%), Gaps = 0/205 (0%)
Strand=Plus/Plus
Query 155822 AATGCAAATATTTATTAAAACATTGACTGGAAAAACTATTACATTAGAAGTCGAAGATTC 155881
||||||||| || | ||||| | || || ||||| || || | ||||| |||| ||
Sbjct 3787 AATGCAAATCTTCGTGAAAACTCTCACCGGTAAAACCATCACTCTTGAAGTTGAAGCCTC 3846
Query 155882 TGATAATATTTTAAACGTGAAAAATAAAATACAAGATAAAGAAGGCATACCTCCAGAACA 155941
||| | || |||||| ||| |||||| ||||| ||||||||||| ||||| || ||
Sbjct 3847 TGACACAATAGAAAACGTAAAAGCTAAAATCCAAGACAAAGAAGGCATTCCTCCTGACCA 3906
Query 155942 ACAAAGATTGATTTATGCCGGTAAGCAGCTCGAAGATACCAGAACTTTATCAGATTATAA 156001
||| | ||||| | || ||||| ||| | ||||| || || | ||||| |||||
Sbjct 3907 GCAACGTTTGATCTTCGCTGGTAAACAGTTGGAAGACGGTAGGACACTCTCAGACTATAA 3966
Query 156002 TATATCCAAAGAGGCGACGCTTCAT 156026
|| ||||| | || ||||||
Sbjct 3967 CATCCAGAAAGAATCTACTCTTCAT 3991
Score = 100 bits (110), Expect = 4e-16
Identities = 145/205 (71%), Gaps = 0/205 (0%)
Strand=Plus/Plus
Query 155822 AATGCAAATATTTATTAAAACATTGACTGGAAAAACTATTACATTAGAAGTCGAAGATTC 155881
||||||||| || | ||||| | || || ||||| || || | ||||| |||| ||
Sbjct 3559 AATGCAAATCTTCGTGAAAACTCTCACCGGTAAAACCATCACCCTTGAAGTTGAAGCCTC 3618
Query 155882 TGATAATATTTTAAACGTGAAAAATAAAATACAAGATAAAGAAGGCATACCTCCAGAACA 155941
||| | || |||||| ||| ||| || ||||| ||||||||||| ||||| || ||
Sbjct 3619 TGACACAATAGAAAACGTAAAAGCTAAGATCCAAGACAAAGAAGGCATTCCTCCTGACCA 3678
Query 155942 ACAAAGATTGATTTATGCCGGTAAGCAGCTCGAAGATACCAGAACTTTATCAGATTATAA 156001
||| | ||||| | || ||||| ||| | ||||| || || | ||||| |||||
Sbjct 3679 GCAACGTTTGATCTTCGCTGGTAAACAGTTGGAAGACGGTAGGACACTCTCAGACTATAA 3738
Query 156002 TATATCCAAAGAGGCGACGCTTCAT 156026
|| ||||| | || ||||||
Sbjct 3739 CATCCAGAAAGAATCTACTCTTCAT 3763
>seq3537
Length=3457499
Score = 98.7 bits (108), Expect = 1e-15
Identities = 132/184 (72%), Gaps = 0/184 (0%)
Strand=Plus/Minus
Query 18410 TTTTCTTTGGAATCTTTTATATAAGTGTCGATTAACAAAGAATACATTTCAGAATGTATG 18469
|||||||| | ||| |||||||| || || | |||||||||||| |||||||| ||
Sbjct 3064203 TTTTCTTTTGGATCAGAAATATAAGTTTCAATGAGCAAAGAATACATCTCAGAATGAATA 3064144
Query 18470 CTTTCCATAGCTATCTGAAAACTATAAAACGATCTAGCCTCGGGATATTGAATCTCGCTA 18529
|||| || || || ||||| | ||| || | | || |||||| || | ||| |
Sbjct 3064143 TTTTCTATGGCAATTTGAAAGCCATAGAAACAACGTGCTTCGGGAATTTTCACCTCCTGA 3064084
Query 18530 TAAAATCTTTCTACCAAATTCTCATTAACTATACCGTCAGCAGATGCGAAAAATGCCAAA 18589
||||| || | || ||| |||||||| ||||| |||| || || || ||||| ||
Sbjct 3064083 CTGAATCTCTCAATCAGATTTTCATTAACGATACCATCAGAAGCGGCAAAGAATGCTAAG 3064024
Query 18590 ACAT 18593
||||
Sbjct 3064023 ACAT 3064020
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 731829706946800
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