Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Trachymyrmex_20zeteki_20[refseq_20GCF_5F001594055.1_202016-03-31]
4,623 sequences; 267,973,152 total letters
Query= NC_021249.1
Length=282895
Score E
Sequences producing significant alignments: (Bits) Value
seq4552 132 9e-26
seq3876 113 8e-20
seq4069 98.7 2e-15
seq3807 84.2 4e-11
>seq4552
Length=86203
Score = 132 bits (146), Expect = 9e-26
Identities = 168/231 (73%), Gaps = 0/231 (0%)
Strand=Plus/Minus
Query 171840 ATACCACCTCTAAGTCGTAATACTAAATGTAAAGTAGCCTCTTTAGAAATATTATAATCT 171899
|| || |||| ||| || | || | ||| | ||||| ||||| || ||||| |||
Sbjct 4017 ATTCCTCCTCGAAGACGCAGAACCAGATGAAGAGTAGATTCTTTCTGGATGTTATAGTCT 3958
Query 171900 GATAAAGATCGTTCGTCATCCAATTGTTTACCAGCAAAAATTAATCTCTGTTGGTCAGGT 171959
|| | | | |||| ||||| ||||||||||| || || || | || ||||||||
Sbjct 3957 GAGAGTGTCCTACCGTCTTCCAACTGTTTACCAGCGAAGATCAAACGTTGCTGGTCAGGA 3898
Query 171960 GGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGTATCTGACGATTCT 172019
|| || |||||||| ||||| |||||| |||||| || ||| || || || | |||
Sbjct 3897 GGAATGCCTTCTTTGTCTTGGATTTTAGCTTTTACGTTTTCTATTGTGTCAGAGGCTTCA 3838
Query 172020 ACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATGAATATCTGCATT 172070
||||| ||||| ||||||||||| || | ||||| | ||| || ||||||
Sbjct 3837 ACTTCAAGAGTGATGGTTTTACCGGTGAGAGTTTTCACGAAGATTTGCATT 3787
Score = 129 bits (142), Expect = 1e-24
Identities = 166/229 (72%), Gaps = 0/229 (0%)
Strand=Plus/Minus
Query 171842 ACCACCTCTAAGTCGTAATACTAAATGTAAAGTAGCCTCTTTAGAAATATTATAATCTGA 171901
||| || | ||||||||| ||||| || | |||| ||||| || || ||||| ||
Sbjct 4471 ACCTCCGCGAAGTCGTAAAACTAAGTGGAGTGTAGATTCTTTTTGGATGTTGTAATCAGA 4412
Query 171902 TAAAGATCGTTCGTCATCCAATTGTTTACCAGCAAAAATTAATCTCTGTTGGTCAGGTGG 171961
| || || |||| |||| ||| || ||||| || ||||| | |||||| || || ||
Sbjct 4411 AAGAGTTCTGCCGTCTTCCAGTTGCTTGCCAGCGAAGATTAAACGCTGTTGATCTGGAGG 4352
Query 171962 TATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGTATCTGACGATTCTAC 172021
||||||||||| || || ||||| || || || ||||| ||||| | ||| ||
Sbjct 4351 GATTCCTTCTTTGTCCTGAATTTTGGCCTTCACGTTTTCAATAGTGTCTGAAGCTTCGAC 4292
Query 172022 TTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATGAATATCTGCATT 172070
||| ||||| ||||||||||| || | ||||| | || || ||||||
Sbjct 4291 TTCAAGAGTGATGGTTTTACCTGTGAGAGTTTTCACAAAAATTTGCATT 4243
Score = 123 bits (136), Expect = 5e-23
Identities = 166/231 (72%), Gaps = 0/231 (0%)
Strand=Plus/Minus
Query 171840 ATACCACCTCTAAGTCGTAATACTAAATGTAAAGTAGCCTCTTTAGAAATATTATAATCT 171899
|| || |||| ||| || | || | ||| | ||||| ||||| || ||||| |||
Sbjct 3789 ATTCCTCCTCGAAGACGCAGAACCAGATGAAGAGTAGATTCTTTCTGGATGTTATAGTCT 3730
Query 171900 GATAAAGATCGTTCGTCATCCAATTGTTTACCAGCAAAAATTAATCTCTGTTGGTCAGGT 171959
|| | | | |||| ||||| ||||||||||| || || || | || ||||||||
Sbjct 3729 GAGAGTGTCCTACCGTCTTCCAACTGTTTACCAGCGAAGATCAAACGTTGCTGGTCAGGA 3670
Query 171960 GGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGTATCTGACGATTCT 172019
|| || |||||||| ||||| || ||| |||||| || ||| || || || | |||
Sbjct 3669 GGAATGCCTTCTTTGTCTTGGATCTTAGCTTTTACGTTTTCTATTGTGTCAGAGGCTTCA 3610
Query 172020 ACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATGAATATCTGCATT 172070
||||| || || ||||||||||| || | ||||| | ||| || ||||||
Sbjct 3609 ACTTCAAGGGTGATGGTTTTACCGGTGAGAGTTTTCACGAAGATTTGCATT 3559
Score = 118 bits (130), Expect = 2e-21
Identities = 164/230 (71%), Gaps = 0/230 (0%)
Strand=Plus/Minus
Query 171840 ATACCACCTCTAAGTCGTAATACTAAATGTAAAGTAGCCTCTTTAGAAATATTATAATCT 171899
|| || |||| ||| || | || | ||| | || | ||||| ||||||||||||
Sbjct 3561 ATTCCTCCTCGAAGACGCAGAACCAGATGAAGTGTGGATTCTTTTTGAATATTATAATCA 3502
Query 171900 GATAAAGATCGTTCGTCATCCAATTGTTTACCAGCAAAAATTAATCTCTGTTGGTCAGGT 171959
|| | || || | || || | |||||| ||||||||||| | | ||| || || ||
Sbjct 3501 GAGAGAGTTCTGCCATCTTCAAGTTGTTTGCCAGCAAAAATCAGACGCTGCTGATCCGGG 3442
Query 171960 GGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGTATCTGACGATTCT 172019
|| ||||| ||||| ||||| ||||| ||| ||||| ||||| ||||| | |||
Sbjct 3441 GGAATTCCCTCTTTGTCTTGGATTTTGGCTTTCACATTTTCAATAGTGTCTGAAGCTTCG 3382
Query 172020 ACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATGAATATCTGCAT 172069
||||| || || ||||||||||| || | || || | || ||||||||
Sbjct 3381 ACTTCGAGGGTGATGGTTTTACCCGTAAGAGTCTTCACAAAGATCTGCAT 3332
Score = 105 bits (116), Expect = 1e-17
Identities = 117/156 (75%), Gaps = 0/156 (0%)
Strand=Plus/Minus
Query 171915 TCATCCAATTGTTTACCAGCAAAAATTAATCTCTGTTGGTCAGGTGGTATTCCTTCTTTA 171974
|| |||| ||||||||| || || || | | |||||| || ||||| ||||| |||||
Sbjct 4170 TCTTCCAGTTGTTTACCGGCGAAGATCAGACGCTGTTGATCCGGTGGAATTCCCTCTTTG 4111
Query 171975 TCTTGTATTTTATTTTTTACATTAGTTATAGTATCTGACGATTCTACTTCTAGAGTAATG 172034
|| || |||||| ||||| || || || ||||| | ||| ||||| || ||||||
Sbjct 4110 TCCTGGATTTTAGCCTTTACGTTTTCAATGGTGTCTGAAGCTTCGACTTCGAGGGTAATG 4051
Query 172035 GTTTTACCAGTTAATGTTTTAATGAATATCTGCATT 172070
|||||||| || | ||||| | ||| || ||||||
Sbjct 4050 GTTTTACCGGTGAGAGTTTTCACGAAGATTTGCATT 4015
>seq3876
Length=890137
Score = 113 bits (124), Expect = 8e-20
Identities = 161/227 (71%), Gaps = 0/227 (0%)
Strand=Plus/Plus
Query 171843 CCACCTCTAAGTCGTAATACTAAATGTAAAGTAGCCTCTTTAGAAATATTATAATCTGAT 171902
|| ||||||||||| | ||| | || | |||| |||||| ||||||||| || |||
Sbjct 519694 CCGCCTCTAAGTCGAAGTACAAGGTGAAGTGTAGACTCTTTCTGAATATTATAGTCGGAT 519753
Query 171903 AAAGATCGTTCGTCATCCAATTGTTTACCAGCAAAAATTAATCTCTGTTGGTCAGGTGGT 171962
|||| ||| | || || | || || || || ||||| | ||| ||||| || || ||
Sbjct 519754 AAAGTCCGTCCATCCTCTAGCTGCTTGCCCGCGAAAATCAGTCTTTGTTGATCGGGAGGA 519813
Query 171963 ATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGTATCTGACGATTCTACT 172022
|| ||||||||||| || ||||| ||| || || || || || || | || ||
Sbjct 519814 ATGCCTTCTTTATCCTGAATTTTCGCTTTCACGTTTTCGATCGTGTCCGAAGCCTCAACC 519873
Query 172023 TCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATGAATATCTGCAT 172069
|| || || || ||||||||||| | || || | || ||||||||
Sbjct 519874 TCCAGTGTGATAGTTTTACCAGTGAGAGTCTTGACAAAAATCTGCAT 519920
Score = 98.7 bits (108), Expect = 2e-15
Identities = 147/209 (70%), Gaps = 0/209 (0%)
Strand=Plus/Plus
Query 171861 ACTAAATGTAAAGTAGCCTCTTTAGAAATATTATAATCTGATAAAGATCGTTCGTCATCC 171920
|| ||||| ||||| | || || ||| ||||||||||| | | || |||| ||
Sbjct 520396 ACCAAATGCAAAGTCGATTCCTTCTGAATGTTATAATCTGAAAGTGTGCGACCGTCTTCA 520455
Query 171921 AATTGTTTACCAGCAAAAATTAATCTCTGTTGGTCAGGTGGTATTCCTTCTTTATCTTGT 171980
| ||||| || || || || || ||||| ||||| || || |||||||| || || ||
Sbjct 520456 AGCTGTTTTCCGGCGAAGATCAACCTCTGCTGGTCCGGGGGGATTCCTTCCTTGTCCTGA 520515
Query 171981 ATTTTATTTTTTACATTAGTTATAGTATCTGACGATTCTACTTCTAGAGTAATGGTTTTA 172040
||||| ||| || || || || || |||| ||| ||||| ||||| || || |||
Sbjct 520516 ATTTTTGCTTTCACGTTCTCAATCGTGTCCGACGCTTCGACTTCCAGAGTGATTGTCTTA 520575
Query 172041 CCAGTTAATGTTTTAATGAATATCTGCAT 172069
|| || | ||||| | || || |||||
Sbjct 520576 CCGGTGAGCGTTTTGACAAAAATTTGCAT 520604
Score = 95.1 bits (104), Expect = 2e-14
Identities = 159/230 (69%), Gaps = 0/230 (0%)
Strand=Plus/Plus
Query 171840 ATACCACCTCTAAGTCGTAATACTAAATGTAAAGTAGCCTCTTTAGAAATATTATAATCT 171899
|||||||| | | || | || ||||| | || | ||||| ||| || || ||
Sbjct 521059 ATACCACCACGTAAACGGAGAACCAAATGCAGTGTGGATTCTTTTTGAATGTTGTAGTCA 521118
Query 171900 GATAAAGATCGTTCGTCATCCAATTGTTTACCAGCAAAAATTAATCTCTGTTGGTCAGGT 171959
|| | || || | || || | ||||| || || || || |||||||| || || ||
Sbjct 521119 GAAAGAGTGCGGCCATCTTCAAGCTGTTTTCCGGCGAAGATCAATCTCTGCTGATCTGGA 521178
Query 171960 GGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGTATCTGACGATTCT 172019
|| ||||||||||| ||||| ||||| ||| ||||| || || || || | ||
Sbjct 521179 GGGATTCCTTCTTTGTCTTGAATTTTTGCTTTGACATTTTCGATCGTGTCAGATGCCTCG 521238
Query 172020 ACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATGAATATCTGCAT 172069
||||| | || |||||||| || || |||||||| | ||| || |||||
Sbjct 521239 ACTTCCAACGTGATGGTTTTTCCGGTCAATGTTTTGACGAAAATTTGCAT 521288
Score = 93.3 bits (102), Expect = 8e-14
Identities = 108/146 (74%), Gaps = 0/146 (0%)
Strand=Plus/Plus
Query 171924 TGTTTACCAGCAAAAATTAATCTCTGTTGGTCAGGTGGTATTCCTTCTTTATCTTGTATT 171983
||||| |||||||| || ||||| || || || || || ||||||||||| ||||| |||
Sbjct 520915 TGTTTTCCAGCAAAGATCAATCTTTGCTGATCCGGAGGGATTCCTTCTTTGTCTTGAATT 520974
Query 171984 TTATTTTTTACATTAGTTATAGTATCTGACGATTCTACTTCTAGAGTAATGGTTTTACCA 172043
|| ||| ||||| || || || || | || ||||| | || ||||| || ||
Sbjct 520975 TTTGCTTTGACATTTTCGATCGTGTCAGATGCCTCAACTTCCAACGTGATGGTCTTTCCG 521034
Query 172044 GTTAATGTTTTAATGAATATCTGCAT 172069
|| |||||||| | ||| || |||||
Sbjct 521035 GTCAATGTTTTGACGAAAATTTGCAT 521060
Score = 93.3 bits (102), Expect = 8e-14
Identities = 159/231 (69%), Gaps = 0/231 (0%)
Strand=Plus/Plus
Query 171840 ATACCACCTCTAAGTCGTAATACTAAATGTAAAGTAGCCTCTTTAGAAATATTATAATCT 171899
|||||||| | | || | || ||||| | || | ||||| ||| || || ||
Sbjct 521287 ATACCACCACGTAAACGGAGAACCAAATGCAGTGTGGATTCTTTTTGAATGTTGTAGTCA 521346
Query 171900 GATAAAGATCGTTCGTCATCCAATTGTTTACCAGCAAAAATTAATCTCTGTTGGTCAGGT 171959
|| | || || | || || | ||||| || || ||||| |||||||| || || ||
Sbjct 521347 GAAAGAGTGCGGCCATCTTCAAGCTGTTTTCCGGCGAAAATCAATCTCTGCTGATCTGGA 521406
Query 171960 GGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGTATCTGACGATTCT 172019
|| ||||||||||| ||||| ||||| ||| ||||| || || || || | ||
Sbjct 521407 GGGATTCCTTCTTTGTCTTGAATTTTTGCTTTGACATTTTCGATCGTGTCAGATGCCTCG 521466
Query 172020 ACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATGAATATCTGCATT 172070
||||| | || |||||||| || || | ||||| | || |||||||||
Sbjct 521467 ACTTCCAACGTGATGGTTTTTCCTGTCAGGGTTTTGACAAAGATCTGCATT 521517
Score = 91.5 bits (100), Expect = 3e-13
Identities = 158/230 (69%), Gaps = 0/230 (0%)
Strand=Plus/Plus
Query 171840 ATACCACCTCTAAGTCGTAATACTAAATGTAAAGTAGCCTCTTTAGAAATATTATAATCT 171899
||||| || | ||| | || || ||||| | |||| || || ||| ||||||||
Sbjct 519919 ATACCGCCGCGAAGCCTCAAAACCAAATGCAGGGTAGATTCCTTCTGAATGTTATAATCA 519978
Query 171900 GATAAAGATCGTTCGTCATCCAATTGTTTACCAGCAAAAATTAATCTCTGTTGGTCAGGT 171959
|| | | || |||| || | ||||| || ||||| || || ||||| || || ||
Sbjct 519979 GAAAGCGTACGGCCGTCTTCGAGCTGTTTTCCGGCAAAGATCAACCTCTGCTGATCGGGA 520038
Query 171960 GGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGTATCTGACGATTCT 172019
|| || |||||||||||||| ||||| || || || || || || || | ||
Sbjct 520039 GGAATGCCTTCTTTATCTTGAATTTTCGCCTTCACGTTTTCGATCGTGTCCGAAGCCTCA 520098
Query 172020 ACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATGAATATCTGCAT 172069
|| || || || || ||||||||||| | || || | || ||||||||
Sbjct 520099 ACCTCCAGTGTGATAGTTTTACCAGTGAGAGTCTTGACAAAAATCTGCAT 520148
>seq4069
Length=1127261
Score = 98.7 bits (108), Expect = 2e-15
Identities = 131/182 (72%), Gaps = 0/182 (0%)
Strand=Plus/Minus
Query 171888 ATATTATAATCTGATAAAGATCGTTCGTCATCCAATTGTTTACCAGCAAAAATTAATCTC 171947
||||||||||| || | || ||| | || |||| |||||| || || || || | || |
Sbjct 161729 ATATTATAATCGGACAGAGTGCGTCCATCCTCCAGTTGTTTGCCGGCGAAGATGAGTCGC 161670
Query 171948 TGTTGGTCAGGTGGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGTA 172007
||||| || || || ||||| || || || || || || || ||||| || |||
Sbjct 161669 TGTTGATCTGGCGGAATTCCCTCCTTGTCCTGGATCTTGGCCTTGACATTCTCGATGGTA 161610
Query 172008 TCTGACGATTCTACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATGAATATCTGC 172067
|| || | ||||| || || || ||||||||||| || | ||||| | ||| ||||||
Sbjct 161609 TCGGAGGCCTCTACCTCGAGGGTGATGGTTTTACCCGTGAGGGTTTTCACGAAGATCTGC 161550
Query 172068 AT 172069
||
Sbjct 161549 AT 161548
>seq3807
Length=3737293
Score = 84.2 bits (92), Expect = 4e-11
Identities = 103/141 (73%), Gaps = 0/141 (0%)
Strand=Plus/Plus
Query 171828 TTTAGTTTCATAATACCACCTCTAAGTCGTAATACTAAATGTAAAGTAGCCTCTTTAGAA 171887
||| ||||| | ||| |||| | || | |||||| |||||||||| || ||
Sbjct 25992 TTTCGTTTCTTGGCACCGCCTCGCAAGCGCAGTACTAAGTGTAAAGTAGATTCCTTCTGG 26051
Query 171888 ATATTATAATCTGATAAAGATCGTTCGTCATCCAATTGTTTACCAGCAAAAATTAATCTC 171947
|| ||||| || || |||| || |||| |||| ||| ||||||||||| || |||||
Sbjct 26052 ATGTTATAGTCCGACAAAGTTCTGCCGTCTTCCAGTTGCTTACCAGCAAAGATCAATCTT 26111
Query 171948 TGTTGGTCAGGTGGTATTCCT 171968
||||| || || || ||||||
Sbjct 26112 TGTTGATCTGGCGGAATTCCT 26132
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 905083694453400
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