Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Trachymyrmex_20zeteki_20[refseq_20GCF_5F001594055.1_202016-03-31] 4,623 sequences; 267,973,152 total letters Query= NC_021858.1 Length=1908524 Score E Sequences producing significant alignments: (Bits) Value seq3918 93.3 5e-13 seq3764 89.7 6e-12 >seq3918 Length=5396348 Score = 93.3 bits (102), Expect = 5e-13 Identities = 141/201 (70%), Gaps = 0/201 (0%) Strand=Plus/Plus Query 1254348 GCCAGTTCGCCGCGCATGATCAGGCGCACGGCGGTCTGGATCTCGCGCGTGCCGATCGTG 1254407 |||| ||| ||| ||| | || | ||| |||||||||||||| || | | |||||| Sbjct 5258579 GCCAATTCACCGGGCAACAAGAGCCTCACAGCGGTCTGGATCTCCCGAGAGGTGATCGTT 5258638 Query 1254408 TTGCGCTTGTTCGAGTGCGCCAGACGGCCGGCCTCGGTGCCGATGCGGTCGATCATGTCG 1254467 ||||||||| | ||||||| | || || | | |||| | |||| | ||| Sbjct 5258639 GAGCGCTTGTTGTAATGCGCCAATCTCGACGCTTCCGCGGCGATTCTCTCGAATACATCG 5258698 Query 1254468 TTGACAAACGAGTTCATGACCGACATCGACTTGTTGGAGATGCCCACGTCGGGGTGCACC 1254527 |||||||| |||||||| ||| | ||| ||||||| || ||| || || || Sbjct 5258699 TTGACAAAGCTGTTCATGATGCTCATAGCTTTGCTGGAGATTCCAGTGTCCGGATGTACT 5258758 Query 1254528 TGCTTGAGCACCTTGTAGATG 1254548 ||||| || |||||||||||| Sbjct 5258759 TGCTTCAGTACCTTGTAGATG 5258779 >seq3764 Length=3140254 Score = 89.7 bits (98), Expect = 6e-12 Identities = 124/174 (71%), Gaps = 0/174 (0%) Strand=Plus/Minus Query 1254375 ACGGCGGTCTGGATCTCGCGCGTGCCGATCGTGTTGCGCTTGTTCGAGTGCGCCAGACGG 1254434 || || || || ||||| || | |||||| ||| ||||| |||| |||||||| Sbjct 2291907 ACAGCAGTTTGAATCTCCCGAGATGTGATCGTCGAGCGTTTGTTGTAGTGTGCCAGACGA 2291848 Query 1254435 CCGGCCTCGGTGCCGATGCGGTCGATCATGTCGTTGACAAACGAGTTCATGACCGACATC 1254494 ||||| | ||||||| |||| | ||||||||||| ||||||| ||| Sbjct 2291847 GACGCCTCTGCTGCGATGCGTTCGAAGACATCGTTGACAAAGCTATTCATGATGCTCATA 2291788 Query 1254495 GACTTGTTGGAGATGCCCACGTCGGGGTGCACCTGCTTGAGCACCTTGTAGATG 1254548 | |||| ||||||| || ||| || || |||||||| | ||||||||||||| Sbjct 2291787 GCCTTGCTGGAGATTCCGGTGTCAGGATGGACCTGCTTCAACACCTTGTAGATG 2291734 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 6106759814970491