Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Trachymyrmex_20zeteki_20[refseq_20GCF_5F001594055.1_202016-03-31] 4,623 sequences; 267,973,152 total letters Query= NC_021901.1 Length=197693 Score E Sequences producing significant alignments: (Bits) Value seq3174 93.3 5e-14 >seq3174 Length=2070283 Score = 93.3 bits (102), Expect = 5e-14 Identities = 151/215 (70%), Gaps = 2/215 (1%) Strand=Plus/Plus Query 172399 AAGAACTTTTATGGGTTATTAAAGGTTCAACTGATTCAAAACAATTAAATGATATAGGTG 172458 ||||||| || ||| |||| ||||| || || |||| ||| |||| ||| ||| Sbjct 328535 AAGAACTATTGTGGTTTATCAAAGGATCGACAAATTCCAAAGAATTGTCGAATAAGGGTA 328594 Query 172459 TTAAAGTTTGGAATGATAATGGTTCTCGTGAATTTTTAGATTTATGCGGGTTTACTGAAA 172518 || | ||||| |||| |||||||| || | || || ||| || || || ||||| | Sbjct 328595 TTCACATTTGGGATGAAAATGGTTCACGGGCTTTCTTGAATTCCTGTGGCTTCACTGATA 328654 Query 172519 GAAAAGAAGGTGATTTAGGCCCAATTTATGGATTTCAATGGAGACATGCAGGGGCTCAAT 172578 || | || |||||||| || || | || || ||||| ||| | | || ||| ||| Sbjct 328655 GAGAGGAGGGTGATTTGGGACCTGTCTACGGTTTTCAGTGGCGGTACTTTGGTGCTGAAT 328714 Query 172579 ATATCGAC-TGTGATACAGATTACACAGGACAAGG 172612 | | || ||| | || ||||||||||||||||| Sbjct 328715 ACAAAAACATGT-ACACGGATTACACAGGACAAGG 328748 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 632453050007240