Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Trachymyrmex_20zeteki_20[refseq_20GCF_5F001594055.1_202016-03-31]
4,623 sequences; 267,973,152 total letters
Query= NC_021924.1
Length=129052
Score E
Sequences producing significant alignments: (Bits) Value
seq3537 235 5e-57
seq4552 107 2e-18
seq3876 89.7 4e-13
>seq3537
Length=3457499
Score = 235 bits (260), Expect = 5e-57
Identities = 327/456 (72%), Gaps = 4/456 (1%)
Strand=Plus/Minus
Query 34203 CGGCGGGTTTTTCAGTATGAAGGTGTTGAGCTTATGCGAGAAGTGTAGCGTGCCGTGATA 34262
||| || ||||||| ||| | ||||| | ||| || | | || ||| ||||
Sbjct 3056485 CGGTGGATTTTTCAAGATGTACGTGTTCAACTTGTGATTGCTCTCAAGAAGGCCATGATG 3056426
Query 34263 ACCGCATGCTTTGCAGCCCTGACAGATAATGTTCTTTTTAGCGGAC--ACGATGAGCTCA 34320
|| || |||||||| ||||| |||| |||| ||| || || || || | ||
Sbjct 3056425 TCCACACGCTTTGCAACCCTGCGAGATC--GTTCCTTTCTTCGAACTGACCATTAATTCG 3056368
Query 34321 GTCTCCGGGTTGTCACATTCCGGACACAACACAAACTTGCGGATGAAACCATCAAGCAGG 34380
|| ||||| ||||| || | || || | ||| | || ||||| |||||||| | |||
Sbjct 3056367 GTTTCCGGATTGTCGCAGGCTGGGCAAAGAACATATTTTCGGATAAAACCATCCAACAGA 3056308
Query 34381 TCCTGTAACTTAACGGAGTCGTGGGAGCCGTTGACGATGAATCGTTCGTTTTTGTAATCG 34440
||||||| ||| | ||||| || |||||||| ||||| |||||||| ||| | ||
Sbjct 3056307 TCCTGTAGCTTTGTCGCATCGTGTGAACCGTTGACAATGAAGCGTTCGTTCTTGAAGTCA 3056248
Query 34441 ACCTGCGTTTGCGCGCCCAGCTCGCACCCGAAGTACTTTGTCGGGTAAATGGCCGGACGT 34500
| ||||||||| ||||||| |||||| || || ||||| ||||| || | ||||||||
Sbjct 3056247 AACTGCGTTTGAGCGCCCAACTCGCAACCAAAATACTTGGTCGGATACGTAGCCGGACGA 3056188
Query 34501 CCAAGCGCCTTGGCGATTTCGGGCATGTTGACGATGACAGTCTTGATGCCGTTGCCCTTT 34560
|| | |||||| || | || |||||||||||| || ||||| || || || |||||
Sbjct 3056187 CCGATCGCCTTCGCCACATCCACCATGTTGACGATCACTGTCTTAATACCATTTCCCTTG 3056128
Query 34561 CCTTCGACCTTGGCGCAGATGCGCGGCATTTTGTAGCGGTAGAACGCGTCCGCCACATTG 34620
||||| ||||| || ||| |||||||| || || || || || || || ||||||
Sbjct 3056127 CCTTCCACCTTCGCTTGGATCCGCGGCATCTTATAACGATAAAAAGCATCGCTGACATTG 3056068
Query 34621 CGGTTAACGTTCACAGTCCCCATCGTGGCTGGTGTT 34656
|| || ||||| || ||||||| ||| | | ||||
Sbjct 3056067 CGATTGACGTTTACGCTCCCCATGGTGACCGATGTT 3056032
>seq4552
Length=86203
Score = 107 bits (118), Expect = 2e-18
Identities = 164/231 (71%), Gaps = 2/231 (1%)
Strand=Plus/Plus
Query 110272 AATGCAAATATTTGTCAAAACTTTAACCGGCAAAACCATTACCGTCGAAA-CGGAGCCTG 110330
||||||||| || || |||||| | ||||| |||||||||||| ||||| || ||| |
Sbjct 4015 AATGCAAATCTTCGTGAAAACTCTCACCGGTAAAACCATTACCCTCGAAGTCGAAGCTTC 4074
Query 110331 ACGATACTGTCGGCCAGGTAAAACAGAAGATTGCCGACAAAGAAGGCGTGCCCGTGGATC 110390
| || || | | | ||||| || || |||||||| || | || |||||
Sbjct 4075 A-GACACCATTGAAAACGTAAAGGCTAAAATCCAGGACAAAGAGGGAATTCCACCGGATC 4133
Query 110391 AACAAAGACTTATTTATGCGGGTAAACAGCTGGAGGATGCCAGAACAATGGCGGATTACA 110450
|||| | || || | || |||||||| ||||| |||| |||||| | | || ||||
Sbjct 4134 AACAGCGTCTGATCTTCGCCGGTAAACAACTGGAAGATGGCAGAACTCTTTCCGACTACA 4193
Query 110451 ACATTCAAAAAGAATCTACGTTGCACATGGTGTTAAGACTGCGAGGGGGAA 110501
|||| ||||||||||| || | ||| |||| | | || ||||| ||||
Sbjct 4194 ACATCCAAAAAGAATCCACACTTCACTTGGTTCTGCGTCTTCGAGGAGGAA 4244
Score = 93.3 bits (102), Expect = 3e-14
Identities = 160/230 (70%), Gaps = 2/230 (1%)
Strand=Plus/Plus
Query 110273 ATGCAAATATTTGTCAAAACTTTAACCGGCAAAACCATTACCGTCGAAA-CGGAGCCTGA 110331
||||| || ||||| || ||| | || || |||||||| ||| ||||| || ||| | |
Sbjct 3332 ATGCAGATCTTTGTGAAGACTCTTACGGGTAAAACCATCACCCTCGAAGTCGAAGCTTCA 3391
Query 110332 CGATACTGTCGGCCAGGTAAAACAGAAGATTGCCGACAAAGAAGGCGTGCCCGTGGATCA 110391
|| ||| | | | || ||| || || |||||||| || | ||| ||||||
Sbjct 3392 -GACACTATTGAAAATGTGAAAGCCAAAATCCAAGACAAAGAGGGAATTCCCCCGGATCA 3450
Query 110392 ACAAAGACTTATTTATGCGGGTAAACAGCTGGAGGATGCCAGAACAATGGCGGATTACAA 110451
|| | || |||| ||| || ||||| || || |||| |||||| | | ||||| ||
Sbjct 3451 GCAGCGTCTGATTTTTGCTGGCAAACAACTTGAAGATGGCAGAACTCTCTCTGATTATAA 3510
Query 110452 CATTCAAAAAGAATCTACGTTGCACATGGTGTTAAGACTGCGAGGGGGAA 110501
|||||||||||||| || | || |||| | | || ||||| ||||
Sbjct 3511 TATTCAAAAAGAATCCACACTTCATCTGGTTCTGCGTCTTCGAGGAGGAA 3560
Score = 91.5 bits (100), Expect = 1e-13
Identities = 159/229 (69%), Gaps = 2/229 (1%)
Strand=Plus/Plus
Query 110272 AATGCAAATATTTGTCAAAACTTTAACCGGCAAAACCATTACCGTCGAAA-CGGAGCCTG 110330
||||||||| ||||| |||||| | || || |||||||| || | ||| || ||| |
Sbjct 4243 AATGCAAATTTTTGTGAAAACTCTCACAGGTAAAACCATCACTCTTGAAGTCGAAGCTTC 4302
Query 110331 ACGATACTGTCGGCCAGGTAAAACAGAAGATTGCCGACAAAGAAGGCGTGCCCGTGGATC 110390
| || ||| | | | || || || ||| ||||||||||| | || ||||
Sbjct 4303 A-GACACTATTGAAAACGTGAAGGCCAAAATTCAGGACAAAGAAGGAATCCCTCCAGATC 4361
Query 110391 AACAAAGACTTATTTATGCGGGTAAACAGCTGGAGGATGCCAGAACAATGGCGGATTACA 110450
|||| | | || | || || || || ||||| || | |||||| | | |||||||
Sbjct 4362 AACAGCGTTTAATCTTCGCTGGCAAGCAACTGGAAGACGGCAGAACTCTTTCTGATTACA 4421
Query 110451 ACATTCAAAAAGAATCTACGTTGCACATGGTGTTAAGACTGCGAGGGGG 110499
|||| |||||||||||||| | ||| | || ||| |||| || || ||
Sbjct 4422 ACATCCAAAAAGAATCTACACTCCACTTAGTTTTACGACTTCGCGGAGG 4470
Score = 84.2 bits (92), Expect = 2e-11
Identities = 142/206 (69%), Gaps = 0/206 (0%)
Strand=Plus/Plus
Query 110264 AGATTTAAAATGCAAATATTTGTCAAAACTTTAACCGGCAAAACCATTACCGTCGAAACG 110323
||||| | |||||||| ||||| ||||| | || || |||||||| ||| | || |
Sbjct 3095 AGATTCATCATGCAAATCTTTGTAAAAACCCTCACTGGGAAAACCATCACCCTTGAGGTG 3154
Query 110324 GAGCCTGACGATACTGTCGGCCAGGTAAAACAGAAGATTGCCGACAAAGAAGGCGTGCCC 110383
|| || || ||| | | | || ||| ||||| ||||||||||| | ||
Sbjct 3155 GAAGCTTCTGACACTATAGAGAACGTCAAAGCTAAGATCCAAGACAAAGAAGGTATTCCT 3214
Query 110384 GTGGATCAACAAAGACTTATTTATGCGGGTAAACAGCTGGAGGATGCCAGAACAATGGCG 110443
||||| ||| | | || | ||| || || || || ||||||| |||||| | |
Sbjct 3215 CCAGATCAGCAACGTTTAATCTTTGCTGGAAAGCAACTAGAGGATGGCAGAACCCTTTCC 3274
Query 110444 GATTACAACATTCAAAAAGAATCTAC 110469
||||||||||| || || ||||||||
Sbjct 3275 GATTACAACATCCAGAAGGAATCTAC 3300
>seq3876
Length=890137
Score = 89.7 bits (98), Expect = 4e-13
Identities = 145/209 (69%), Gaps = 0/209 (0%)
Strand=Plus/Minus
Query 110273 ATGCAAATATTTGTCAAAACTTTAACCGGCAAAACCATTACCGTCGAAACGGAGCCTGAC 110332
|||||||| || |||||||| || ||||| || ||||| || | ||| ||| |
Sbjct 521060 ATGCAAATTTTCGTCAAAACATTGACCGGAAAGACCATCACGTTGGAAGTTGAGGCATCT 521001
Query 110333 GATACTGTCGGCCAGGTAAAACAGAAGATTGCCGACAAAGAAGGCGTGCCCGTGGATCAA 110392
|| || ||| | || ||| || ||| ||||||||||| | || ||||||
Sbjct 521000 GACACGATCGAAAATGTCAAAGCAAAAATTCAAGACAAAGAAGGAATCCCTCCGGATCAG 520941
Query 110393 CAAAGACTTATTTATGCGGGTAAACAGCTGGAGGATGCCAGAACAATGGCGGATTACAAC 110452
|||||| | || | ||| || |||||||| || |||| | | ||| | | || |||||
Sbjct 520940 CAAAGATTGATCTTTGCTGGAAAACAGCTTGAAGATGGCCGCACACTTTCTGACTACAAT 520881
Query 110453 ATTCAAAAAGAATCTACGTTGCACATGGT 110481
||||| || ||||| || |||| ||||
Sbjct 520880 ATTCAGAAGGAATCCACACTGCATTTGGT 520852
Score = 89.7 bits (98), Expect = 4e-13
Identities = 145/209 (69%), Gaps = 0/209 (0%)
Strand=Plus/Minus
Query 110273 ATGCAAATATTTGTCAAAACTTTAACCGGCAAAACCATTACCGTCGAAACGGAGCCTGAC 110332
|||||||| || |||||||| || ||||| |||||||| || | ||| ||| |
Sbjct 521288 ATGCAAATTTTCGTCAAAACATTGACCGGAAAAACCATCACGTTGGAAGTCGAGGCATCT 521229
Query 110333 GATACTGTCGGCCAGGTAAAACAGAAGATTGCCGACAAAGAAGGCGTGCCCGTGGATCAA 110392
|| || ||| | || ||| || ||| ||||||||||| | || |||||
Sbjct 521228 GACACGATCGAAAATGTCAAAGCAAAAATTCAAGACAAAGAAGGAATCCCTCCAGATCAG 521169
Query 110393 CAAAGACTTATTTATGCGGGTAAACAGCTGGAGGATGCCAGAACAATGGCGGATTACAAC 110452
|| ||| | || | || || |||||||| || |||| | | || | | || ||||||
Sbjct 521168 CAGAGATTGATCTTCGCCGGAAAACAGCTTGAAGATGGCCGCACTCTTTCTGACTACAAC 521109
Query 110453 ATTCAAAAAGAATCTACGTTGCACATGGT 110481
|||||||||||||| || |||| ||||
Sbjct 521108 ATTCAAAAAGAATCCACACTGCATTTGGT 521080
Score = 86.0 bits (94), Expect = 5e-12
Identities = 145/210 (69%), Gaps = 0/210 (0%)
Strand=Plus/Minus
Query 110272 AATGCAAATATTTGTCAAAACTTTAACCGGCAAAACCATTACCGTCGAAACGGAGCCTGA 110331
|||||| || ||||||||||| | || || |||||||| || | ||| ||| |
Sbjct 521517 AATGCAGATCTTTGTCAAAACCCTGACAGGAAAAACCATCACGTTGGAAGTCGAGGCATC 521458
Query 110332 CGATACTGTCGGCCAGGTAAAACAGAAGATTGCCGACAAAGAAGGCGTGCCCGTGGATCA 110391
|| || ||| | || ||| || ||| ||||||||||| | || |||||
Sbjct 521457 TGACACGATCGAAAATGTCAAAGCAAAAATTCAAGACAAAGAAGGAATCCCTCCAGATCA 521398
Query 110392 ACAAAGACTTATTTATGCGGGTAAACAGCTGGAGGATGCCAGAACAATGGCGGATTACAA 110451
|| ||| | |||| || || |||||||| || |||| | | || | | || |||||
Sbjct 521397 GCAGAGATTGATTTTCGCCGGAAAACAGCTTGAAGATGGCCGCACTCTTTCTGACTACAA 521338
Query 110452 CATTCAAAAAGAATCTACGTTGCACATGGT 110481
||||||||||||||| || |||| ||||
Sbjct 521337 CATTCAAAAAGAATCCACACTGCATTTGGT 521308
Score = 82.4 bits (90), Expect = 6e-11
Identities = 155/228 (68%), Gaps = 0/228 (0%)
Strand=Plus/Minus
Query 110273 ATGCAAATATTTGTCAAAACTTTAACCGGCAAAACCATTACCGTCGAAACGGAGCCTGAC 110332
||||| || |||||||| ||| | || || ||||| || || | || ||| ||
Sbjct 519920 ATGCAGATTTTTGTCAAGACTCTCACTGGTAAAACTATCACACTGGAGGTTGAGGCTTCG 519861
Query 110333 GATACTGTCGGCCAGGTAAAACAGAAGATTGCCGACAAAGAAGGCGTGCCCGTGGATCAA 110392
|| || ||| | || ||| ||| ||| || ||||||||| | || ||||||
Sbjct 519860 GACACGATCGAAAACGTGAAAGCGAAAATTCAGGATAAAGAAGGCATTCCTCCCGATCAA 519801
Query 110393 CAAAGACTTATTTATGCGGGTAAACAGCTGGAGGATGCCAGAACAATGGCGGATTACAAC 110452
|||||||| |||| ||||| || ||||| ||||||| | || | | || || ||
Sbjct 519800 CAAAGACTGATTTTCGCGGGCAAGCAGCTAGAGGATGGACGGACTTTATCCGACTATAAT 519741
Query 110453 ATTCAAAAAGAATCTACGTTGCACATGGTGTTAAGACTGCGAGGGGGA 110500
||||| ||||| ||||| | ||| | || | |||| |||| |||
Sbjct 519740 ATTCAGAAAGAGTCTACACTTCACCTTGTACTTCGACTTAGAGGCGGA 519693
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 412818339343139
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |