Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Trachymyrmex_20zeteki_20[refseq_20GCF_5F001594055.1_202016-03-31] 4,623 sequences; 267,973,152 total letters Query= NC_022098.1 Length=2473870 Score E Sequences producing significant alignments: (Bits) Value seq3918 111 2e-18 seq2867 87.8 3e-11 >seq3918 Length=5396348 Score = 111 bits (122), Expect = 2e-18 Identities = 169/241 (70%), Gaps = 0/241 (0%) Strand=Plus/Plus Query 1485470 TGTACTTGGTGACGGCCTTGGTACCCTCTGAGACGGCGTGCCTGGCCAGTTCGCCGCGCA 1485529 |||||||||| || || || || || || ||| |||||| | |||| ||| ||| ||| Sbjct 5258535 TGTACTTGGTTACTGCTTTCGTGCCTTCGCTGACTGCGTGCTTCGCCAATTCACCGGGCA 5258594 Query 1485530 TGATCAGGCGCACGGCGGTCTGGATCTCGCGGGTGCCGATCGTGTTGCGCTTGTTAGTGC 1485589 | || | ||| |||||||||||||| || | | |||||| ||||||||| Sbjct 5258595 ACAAGAGCCTCACAGCGGTCTGGATCTCCCGAGAGGTGATCGTTGAGCGCTTGTTGTAAT 5258654 Query 1485590 GCGCCAGGCGGCCGGCCTCGGTGCCGATGCGGTCGATCATGTCGTTGACAAACGAGTTCA 1485649 |||||| | || || | | |||| | |||| | ||||||||||| ||||| Sbjct 5258655 GCGCCAATCTCGACGCTTCCGCGGCGATTCTCTCGAATACATCGTTGACAAAGCTGTTCA 5258714 Query 1485650 TGATCGACATCGATTTGTTGGAGATGCCCACGTCGGGGTGCACCTGCTTGAGCACCTTGT 1485709 |||| ||| | |||| ||||||| || ||| || || || ||||| || ||||||| Sbjct 5258715 TGATGCTCATAGCTTTGCTGGAGATTCCAGTGTCCGGATGTACTTGCTTCAGTACCTTGT 5258774 Query 1485710 A 1485710 | Sbjct 5258775 A 5258775 Score = 102 bits (112), Expect = 1e-15 Identities = 167/241 (69%), Gaps = 0/241 (0%) Strand=Plus/Minus Query 1485470 TGTACTTGGTGACGGCCTTGGTACCCTCTGAGACGGCGTGCCTGGCCAGTTCGCCGCGCA 1485529 |||||||||| || || || || || || ||| |||||| | |||| ||| ||| ||| Sbjct 5261708 TGTACTTGGTTACTGCTTTCGTGCCTTCGCTGACTGCGTGCTTCGCCAATTCACCGGGCA 5261649 Query 1485530 TGATCAGGCGCACGGCGGTCTGGATCTCGCGGGTGCCGATCGTGTTGCGCTTGTTAGTGC 1485589 | || | ||| |||||||||||||| || | | |||||| ||||||||| Sbjct 5261648 ACAAGAGCCTCACAGCGGTCTGGATCTCCCGAGAGGTGATCGTTGAGCGCTTGTTGTAAT 5261589 Query 1485590 GCGCCAGGCGGCCGGCCTCGGTGCCGATGCGGTCGATCATGTCGTTGACAAACGAGTTCA 1485649 |||||| | || || | | |||| | |||| | ||||||||||| ||||| Sbjct 5261588 GCGCCAATCTCGACGCTTCCGCGGCGATTCTCTCGAATACATCGTTGACAAAGCTGTTCA 5261529 Query 1485650 TGATCGACATCGATTTGTTGGAGATGCCCACGTCGGGGTGCACCTGCTTGAGCACCTTGT 1485709 |||| ||| | |||| ||||||| || || || || || ||||| || || |||| Sbjct 5261528 TGATGCTCATAGCTTTGCTGGAGATTCCAGTATCCGGATGTACTTGCTTCAGTACTTTGT 5261469 Query 1485710 A 1485710 | Sbjct 5261468 A 5261468 >seq2867 Length=5423913 Score = 87.8 bits (96), Expect = 3e-11 Identities = 164/241 (68%), Gaps = 0/241 (0%) Strand=Plus/Plus Query 1485470 TGTACTTGGTGACGGCCTTGGTACCCTCTGAGACGGCGTGCCTGGCCAGTTCGCCGCGCA 1485529 ||||||||||||| |||||||| || || ||||||||| | |||| ||| ||| ||| Sbjct 4767421 TGTACTTGGTGACAGCCTTGGTGCCTTCACTCACGGCGTGCTTCGCCAATTCTCCGGGCA 4767480 Query 1485530 TGATCAGGCGCACGGCGGTCTGGATCTCGCGGGTGCCGATCGTGTTGCGCTTGTTAGTGC 1485589 | || | || || || || || || || | | ||| || || |||||| | Sbjct 4767481 GCAAAAGCCTGACAGCAGTTTGAATTTCCCGAGAGGTGATAGTTGAACGTTTGTTATAGT 4767540 Query 1485590 GCGCCAGGCGGCCGGCCTCGGTGCCGATGCGGTCGATCATGTCGTTGACAAACGAGTTCA 1485649 | |||| || ||||| | | |||| || || | | ||||||||||| |||| Sbjct 4767541 GAGCCAAACGCGATGCCTCAGCGGCGATTCGCTCAAAGACATCGTTGACAAAACTATTCA 4767600 Query 1485650 TGATCGACATCGATTTGTTGGAGATGCCCACGTCGGGGTGCACCTGCTTGAGCACCTTGT 1485709 | || ||| | |||| ||||||| || ||| || || |||||||| || || || | Sbjct 4767601 TTATGCTCATGGCTTTGCTGGAGATTCCAGTGTCCGGATGAACCTGCTTCAGTACTTTAT 4767660 Query 1485710 A 1485710 | Sbjct 4767661 A 4767661 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 7915754630404497