Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Trachymyrmex_20zeteki_20[refseq_20GCF_5F001594055.1_202016-03-31] 4,623 sequences; 267,973,152 total letters Query= NC_022646.1 Length=101818 Score E Sequences producing significant alignments: (Bits) Value seq3876 120 2e-22 seq4069 118 7e-22 seq4552 116 2e-21 >seq3876 Length=890137 Score = 120 bits (132), Expect = 2e-22 Identities = 141/191 (74%), Gaps = 0/191 (0%) Strand=Plus/Plus Query 34787 TCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCGTCCAGTTGCTTTCCGGCGAAG 34846 || || |||||||| ||||| || || |||| |||| || || || ||||||||||| Sbjct 521326 TCTTTTTGAATGTTGTAGTCAGAAAGAGTGCGGCCATCTTCAAGCTGTTTTCCGGCGAAA 521385 Query 34847 ATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGTTTATTTTTTGTTTGACGGAT 34906 |||| || ||||| ||| | || | || || ||||| | |||||| |||||| | Sbjct 521386 ATCAATCTCTGCTGATCTGGAGGGATTCCTTCTTTGTCTTGAATTTTTGCTTTGACATTT 521445 Query 34907 GCTATCGATTCATTGGCCTCGACATCAACGGTTATGGTCTTTCCCGTGAGGGTCTTTACA 34966 | |||| ||| |||||||| || | || ||||| ||||| || ||||| || ||| Sbjct 521446 TCGATCGTGTCAGATGCCTCGACTTCCAACGTGATGGTTTTTCCTGTCAGGGTTTTGACA 521505 Query 34967 AAGATCTGCAT 34977 ||||||||||| Sbjct 521506 AAGATCTGCAT 521516 Score = 102 bits (112), Expect = 5e-17 Identities = 137/191 (72%), Gaps = 0/191 (0%) Strand=Plus/Plus Query 34787 TCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCGTCCAGTTGCTTTCCGGCGAAG 34846 ||||||||||||||||| || || || |||| | || || || || |||||||||||| Sbjct 520414 TCCTTCTGAATGTTATAATCTGAAAGTGTGCGACCGTCTTCAAGCTGTTTTCCGGCGAAG 520473 Query 34847 ATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGTTTATTTTTTGTTTGACGGAT 34906 |||| | |||||||| | || | || |||||||| | |||||| ||| ||| Sbjct 520474 ATCAACCTCTGCTGGTCCGGGGGGATTCCTTCCTTGTCCTGAATTTTTGCTTTCACGTTC 520533 Query 34907 GCTATCGATTCATTGGCCTCGACATCAACGGTTATGGTCTTTCCCGTGAGGGTCTTTACA 34966 | |||| || || ||||| || | || || ||||| || ||||| || || ||| Sbjct 520534 TCAATCGTGTCCGACGCTTCGACTTCCAGAGTGATTGTCTTACCGGTGAGCGTTTTGACA 520593 Query 34967 AAGATCTGCAT 34977 || || ||||| Sbjct 520594 AAAATTTGCAT 520604 Score = 102 bits (112), Expect = 5e-17 Identities = 137/191 (72%), Gaps = 0/191 (0%) Strand=Plus/Plus Query 34787 TCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCGTCCAGTTGCTTTCCGGCGAAG 34846 ||||| |||||||| ||||| || ||| | || |||| || || || |||||||||||| Sbjct 520642 TCCTTTTGAATGTTGTAGTCAGAAAGGGTACGGCCATCTTCAAGCTGTTTTCCGGCGAAG 520701 Query 34847 ATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGTTTATTTTTTGTTTGACGGAT 34906 |||| | |||||||| | || | || |||||||| | |||||| ||| ||| Sbjct 520702 ATCAACCTCTGCTGGTCCGGAGGGATTCCTTCCTTGTCCTGAATTTTTGCTTTCACGTTC 520761 Query 34907 GCTATCGATTCATTGGCCTCGACATCAACGGTTATGGTCTTTCCCGTGAGGGTCTTTACA 34966 | |||| ||| ||||| || || | || ||||||||||| || | || || || Sbjct 520762 TCAATCGTGTCAGATGCCTCAACTTCCAATGTGATGGTCTTTCCGGTCAATGTTTTGACG 520821 Query 34967 AAGATCTGCAT 34977 || || ||||| Sbjct 520822 AAAATTTGCAT 520832 Score = 102 bits (112), Expect = 5e-17 Identities = 137/191 (72%), Gaps = 0/191 (0%) Strand=Plus/Plus Query 34787 TCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCGTCCAGTTGCTTTCCGGCGAAG 34846 || || |||||||| ||||| || || |||| |||| || || || |||||||||||| Sbjct 521098 TCTTTTTGAATGTTGTAGTCAGAAAGAGTGCGGCCATCTTCAAGCTGTTTTCCGGCGAAG 521157 Query 34847 ATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGTTTATTTTTTGTTTGACGGAT 34906 |||| || ||||| ||| | || | || || ||||| | |||||| |||||| | Sbjct 521158 ATCAATCTCTGCTGATCTGGAGGGATTCCTTCTTTGTCTTGAATTTTTGCTTTGACATTT 521217 Query 34907 GCTATCGATTCATTGGCCTCGACATCAACGGTTATGGTCTTTCCCGTGAGGGTCTTTACA 34966 | |||| ||| |||||||| || | || ||||| ||||| || | || || || Sbjct 521218 TCGATCGTGTCAGATGCCTCGACTTCCAACGTGATGGTTTTTCCGGTCAATGTTTTGACG 521277 Query 34967 AAGATCTGCAT 34977 || || ||||| Sbjct 521278 AAAATTTGCAT 521288 Score = 100 bits (110), Expect = 2e-16 Identities = 162/231 (70%), Gaps = 4/231 (2%) Strand=Plus/Plus Query 34749 TTCCTCCCCTCAACCTCAGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCG 34808 |||| || | ||| || ||||||| || | ||| ||||||||||| || || || | Sbjct 521516 TTCCACCACGCAATCTGAGGACCAAATGGAGAGTGGATTCCTTCTGAATATTGTAATCGG 521575 Query 34809 ATAGGCTGCGCTCATCGTCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCG 34868 ||| | | || | || || || |||||||| |||||||||| || ||||| || | | Sbjct 521576 ATAAGGTACGTCCGTCTTCAAGCTGCTTTCCAGCGAAGATCAAACGCTGCTGATCGGGTG 521635 Query 34869 GCACCCCCTCCTTGTCGTTTATTTTTTGTTTGACGGATGCT--ATCGATTCATTGGCCTC 34926 | | || ||||| || | || ||| ||| || || || || | ||| || || Sbjct 521636 GGATACCTTCCTTATCTTGGATCTTTGCTTTTAC--ATTCTCGATGGTGTCAGAAGCTTC 521693 Query 34927 GACATCAACGGTTATGGTCTTTCCCGTGAGGGTCTTTACAAAGATCTGCAT 34977 || |||| |||||||||||| || || | ||||| || || |||||||| Sbjct 521694 AACTTCAAGGGTTATGGTCTTCCCGGTCAATGTCTTCACGAAAATCTGCAT 521744 Score = 96.9 bits (106), Expect = 2e-15 Identities = 136/191 (71%), Gaps = 0/191 (0%) Strand=Plus/Plus Query 34787 TCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCGTCCAGTTGCTTTCCGGCGAAG 34846 ||||||||||| || ||||| || || |||| |||| || || || ||||| || ||| Sbjct 520870 TCCTTCTGAATATTGTAGTCAGAAAGTGTGCGGCCATCTTCAAGCTGTTTTCCAGCAAAG 520929 Query 34847 ATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGTTTATTTTTTGTTTGACGGAT 34906 |||| || |||||| || | || | || || ||||| | |||||| |||||| | Sbjct 520930 ATCAATCTTTGCTGATCCGGAGGGATTCCTTCTTTGTCTTGAATTTTTGCTTTGACATTT 520989 Query 34907 GCTATCGATTCATTGGCCTCGACATCAACGGTTATGGTCTTTCCCGTGAGGGTCTTTACA 34966 | |||| ||| ||||| || || | || ||||||||||| || | || || || Sbjct 520990 TCGATCGTGTCAGATGCCTCAACTTCCAACGTGATGGTCTTTCCGGTCAATGTTTTGACG 521049 Query 34967 AAGATCTGCAT 34977 || || ||||| Sbjct 521050 AAAATTTGCAT 521060 Score = 91.5 bits (100), Expect = 1e-13 Identities = 137/193 (71%), Gaps = 4/193 (2%) Strand=Plus/Plus Query 34787 TCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCGTCCAGTTGCTTTCCGGCGAAG 34846 ||||||||||||||||| || || || | || | || || || || |||||||| ||| Sbjct 520186 TCCTTCTGAATGTTATAATCAGAAAGCGTACGGCCGTCTTCGAGCTGTTTTCCGGCAAAG 520245 Query 34847 ATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGTTTATTTTTTGTTTGACGGAT 34906 |||| | ||||| ||| | || | || |||||||| | ||||| |||||| || Sbjct 520246 ATCAACCTCTGCTGATCTGGAGGGATTCCTTCCTTGTCTTGAATTTTGGCTTTGAC--AT 520303 Query 34907 GCT--ATCGATTCATTGGCCTCGACATCAACGGTTATGGTCTTTCCCGTGAGGGTCTTTA 34964 || |||| || ||||| || || | || ||||||||||| || | ||||| | Sbjct 520304 TCTCGATCGTGTCCGACGCCTCAACTTCCAACGTGATGGTCTTTCCTGTTAATGTCTTGA 520363 Query 34965 CAAAGATCTGCAT 34977 | || || ||||| Sbjct 520364 CGAAAATTTGCAT 520376 >seq4069 Length=1127261 Score = 118 bits (130), Expect = 7e-22 Identities = 143/193 (74%), Gaps = 4/193 (2%) Strand=Plus/Minus Query 34790 TTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCGTCCAGTTGCTTTCCGGCGAAGATC 34849 || || || ||||| || || || |||| |||| |||||||| || ||||||||||| Sbjct 161735 TTTTGGATATTATAATCGGACAGAGTGCGTCCATCCTCCAGTTGTTTGCCGGCGAAGATG 161676 Query 34850 AGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGTTTATTTTTTGTTTGACGGATGCT 34909 ||||| || || ||| |||| | ||||||||||| | || || ||||| || || Sbjct 161675 AGTCGCTGTTGATCTGGCGGAATTCCCTCCTTGTCCTGGATCTTGGCCTTGAC--ATTCT 161618 Query 34910 --ATCGATTCATTGGCCTCGACATCAACGGTTATGGTCTTTCCCGTGAGGGTCTTTACAA 34967 || | || |||||| || || | ||| ||||| || ||||||||||| || || | Sbjct 161617 CGATGGTATCGGAGGCCTCTACCTCGAGGGTGATGGTTTTACCCGTGAGGGTTTTCACGA 161558 Query 34968 AGATCTGCATGAT 34980 ||||||||||||| Sbjct 161557 AGATCTGCATGAT 161545 >seq4552 Length=86203 Score = 116 bits (128), Expect = 2e-21 Identities = 142/194 (73%), Gaps = 0/194 (0%) Strand=Plus/Minus Query 34787 TCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCGTCCAGTTGCTTTCCGGCGAAG 34846 |||||||| ||||| || || || ||| | | |||| || ||||||||||| || ||| Sbjct 3294 TCCTTCTGGATGTTGTAATCGGAAAGGGTTCTGCCATCCTCTAGTTGCTTTCCAGCAAAG 3235 Query 34847 ATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGTTTATTTTTTGTTTGACGGAT 34906 || | |||||||| ||| | || | || || ||||| | || || ||||||| Sbjct 3234 ATTAAACGTTGCTGATCTGGAGGAATACCTTCTTTGTCTTGGATCTTAGCTTTGACGTTC 3175 Query 34907 GCTATCGATTCATTGGCCTCGACATCAACGGTTATGGTCTTTCCCGTGAGGGTCTTTACA 34966 |||| | ||| || || || |||| ||| ||||| || || |||||||| |||||| Sbjct 3174 TCTATAGTGTCAGAAGCTTCCACCTCAAGGGTGATGGTTTTCCCAGTGAGGGTTTTTACA 3115 Query 34967 AAGATCTGCATGAT 34980 ||||| |||||||| Sbjct 3114 AAGATTTGCATGAT 3101 Score = 98.7 bits (108), Expect = 6e-16 Identities = 159/229 (69%), Gaps = 0/229 (0%) Strand=Plus/Minus Query 34749 TTCCTCCCCTCAACCTCAGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCG 34808 ||||||| | | | ||| ||||| |||| || || ||||| ||||||||||| | Sbjct 3788 TTCCTCCTCGAAGACGCAGAACCAGATGAAGAGTAGATTCTTTCTGGATGTTATAGTCTG 3729 Query 34809 ATAGGCTGCGCTCATCGTCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCG 34868 | || | | | || |||| || || || |||||||||| ||||||||||| | | Sbjct 3728 AGAGTGTCCTACCGTCTTCCAACTGTTTACCAGCGAAGATCAAACGTTGCTGGTCAGGAG 3669 Query 34869 GCACCCCCTCCTTGTCGTTTATTTTTTGTTTGACGGATGCTATCGATTCATTGGCCTCGA 34928 | | || || ||||| | || || ||| ||| | |||| | ||| ||| || | Sbjct 3668 GAATGCCTTCTTTGTCTTGGATCTTAGCTTTTACGTTTTCTATTGTGTCAGAGGCTTCAA 3609 Query 34929 CATCAACGGTTATGGTCTTTCCCGTGAGGGTCTTTACAAAGATCTGCAT 34977 | |||| ||| ||||| || || ||||| || || || ||||| ||||| Sbjct 3608 CTTCAAGGGTGATGGTTTTACCGGTGAGAGTTTTCACGAAGATTTGCAT 3560 Score = 98.7 bits (108), Expect = 6e-16 Identities = 159/229 (69%), Gaps = 0/229 (0%) Strand=Plus/Minus Query 34749 TTCCTCCCCTCAACCTCAGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCG 34808 ||||||| | | | ||| ||||| |||| || || ||||| ||||||||||| | Sbjct 4016 TTCCTCCTCGAAGACGCAGAACCAGATGAAGAGTAGATTCTTTCTGGATGTTATAGTCTG 3957 Query 34809 ATAGGCTGCGCTCATCGTCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCG 34868 | || | | | || |||| || || || |||||||||| ||||||||||| | | Sbjct 3956 AGAGTGTCCTACCGTCTTCCAACTGTTTACCAGCGAAGATCAAACGTTGCTGGTCAGGAG 3897 Query 34869 GCACCCCCTCCTTGTCGTTTATTTTTTGTTTGACGGATGCTATCGATTCATTGGCCTCGA 34928 | | || || ||||| | ||||| ||| ||| | |||| | ||| ||| || | Sbjct 3896 GAATGCCTTCTTTGTCTTGGATTTTAGCTTTTACGTTTTCTATTGTGTCAGAGGCTTCAA 3837 Query 34929 CATCAACGGTTATGGTCTTTCCCGTGAGGGTCTTTACAAAGATCTGCAT 34977 | |||| || ||||| || || ||||| || || || ||||| ||||| Sbjct 3836 CTTCAAGAGTGATGGTTTTACCGGTGAGAGTTTTCACGAAGATTTGCAT 3788 Score = 95.1 bits (104), Expect = 8e-15 Identities = 159/230 (69%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 34749 TTCCTCCCCTCAACCTCAGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCG 34808 ||||||| | | | ||| ||||| |||| ||| || || ||||| ||||| || | Sbjct 3560 TTCCTCCTCGAAGACGCAGAACCAGATGAAGTGTGGATTCTTTTTGAATATTATAATCAG 3501 Query 34809 ATAGGCTGCGCTCATCGTCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCG 34868 | || | | |||| || ||||| || || || || ||||| || ||||| || | | Sbjct 3500 AGAGAGTTCTGCCATCTTCAAGTTGTTTGCCAGCAAAAATCAGACGCTGCTGATCCGGGG 3441 Query 34869 GCACCCCCTCCTTGTCGTTTATTTTTTGTTTGACGGATGCTATCGATTCATTGGCCTCGA 34928 | | ||||| ||||| | ||||| ||| || | | || | || || |||| Sbjct 3440 GAATTCCCTCTTTGTCTTGGATTTTGGCTTTCACATTTTCAATAGTGTCTGAAGCTTCGA 3381 Query 34929 CATCAACGGTTATGGTCTTTCCCGTGAGGGTCTTTACAAAGATCTGCATG 34978 | || | ||| ||||| || ||||| || ||||| ||||||||||||||| Sbjct 3380 CTTCGAGGGTGATGGTTTTACCCGTAAGAGTCTTCACAAAGATCTGCATG 3331 Score = 93.3 bits (102), Expect = 3e-14 Identities = 158/229 (69%), Gaps = 0/229 (0%) Strand=Plus/Minus Query 34749 TTCCTCCCCTCAACCTCAGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCG 34808 ||||||| | | | ||| |||| ||||| ||| || || || ||||| ||||| | Sbjct 4244 TTCCTCCTCGAAGACGCAGAACCAAGTGAAGTGTGGATTCTTTTTGGATGTTGTAGTCGG 4185 Query 34809 ATAGGCTGCGCTCATCGTCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCG 34868 | || | | |||| |||||||| || |||||||||||||| || || || || | | Sbjct 4184 AAAGAGTTCTGCCATCTTCCAGTTGTTTACCGGCGAAGATCAGACGCTGTTGATCCGGTG 4125 Query 34869 GCACCCCCTCCTTGTCGTTTATTTTTTGTTTGACGGATGCTATCGATTCATTGGCCTCGA 34928 | | ||||| ||||| | ||||| || ||| | | || | || || |||| Sbjct 4124 GAATTCCCTCTTTGTCCTGGATTTTAGCCTTTACGTTTTCAATGGTGTCTGAAGCTTCGA 4065 Query 34929 CATCAACGGTTATGGTCTTTCCCGTGAGGGTCTTTACAAAGATCTGCAT 34977 | || | ||| ||||| || || ||||| || || || ||||| ||||| Sbjct 4064 CTTCGAGGGTAATGGTTTTACCGGTGAGAGTTTTCACGAAGATTTGCAT 4016 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 325674449551637