Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Trachymyrmex_20zeteki_20[refseq_20GCF_5F001594055.1_202016-03-31]
4,623 sequences; 267,973,152 total letters
Query= NC_023426.1
Length=245717
Score E
Sequences producing significant alignments: (Bits) Value
seq4552 102 1e-16
seq3876 95.1 2e-14
>seq4552
Length=86203
Score = 102 bits (112), Expect = 1e-16
Identities = 158/226 (70%), Gaps = 0/226 (0%)
Strand=Plus/Plus
Query 146032 TGCAAATATTCATAAAAACATTAACAGGAAAAACAATTACTATTGATGTAGAACATAACG 146091
||||||| ||| | ||||| | || || ||||| || ||| |||| || ||| |
Sbjct 3789 TGCAAATCTTCGTGAAAACTCTCACCGGTAAAACCATCACTCTTGAAGTTGAAGCCTCTG 3848
Query 146092 ATACTATTCAAAATGTAAAAAATAAAATACAACTTAAAGAAGGCATTCCACCCGATCAAC 146151
| || || |||| |||||| |||||| ||| |||||||||||||| || || || |
Sbjct 3849 ACACAATAGAAAACGTAAAAGCTAAAATCCAAGACAAAGAAGGCATTCCTCCTGACCAGC 3908
Query 146152 AAAGACTCATTTTTGCAGGTAAACAATTAGATGATAATAGAACGTTAACAGATTATAATA 146211
|| | | || || || |||||||| || || || ||| || | |||| ||||| |
Sbjct 3909 AACGTTTGATCTTCGCTGGTAAACAGTTGGAAGACGGTAGGACACTCTCAGACTATAACA 3968
Query 146212 TACAAAAAGAATCGACTATCCATTTAGTATTACGATTAAGAGGAGG 146257
| || |||||||| ||| | ||| | || | || | |||||||
Sbjct 3969 TCCAGAAAGAATCTACTCTTCATCTGGTTCTGCGTCTTCGAGGAGG 4014
Score = 98.7 bits (108), Expect = 2e-15
Identities = 158/227 (70%), Gaps = 0/227 (0%)
Strand=Plus/Plus
Query 146032 TGCAAATATTCATAAAAACATTAACAGGAAAAACAATTACTATTGATGTAGAACATAACG 146091
||||||| || | ||||| | ||||| ||||| || ||| |||| || ||| | |
Sbjct 4245 TGCAAATTTTTGTGAAAACTCTCACAGGTAAAACCATCACTCTTGAAGTCGAAGCTTCAG 4304
Query 146092 ATACTATTCAAAATGTAAAAAATAAAATACAACTTAAAGAAGGCATTCCACCCGATCAAC 146151
| |||||| |||| || || ||||| || |||||||| || || || |||||||
Sbjct 4305 ACACTATTGAAAACGTGAAGGCCAAAATTCAGGACAAAGAAGGAATCCCTCCAGATCAAC 4364
Query 146152 AAAGACTCATTTTTGCAGGTAAACAATTAGATGATAATAGAACGTTAACAGATTATAATA 146211
| | | || || || || || ||| | || || ||||| | | ||||| || |
Sbjct 4365 AGCGTTTAATCTTCGCTGGCAAGCAACTGGAAGACGGCAGAACTCTTTCTGATTACAACA 4424
Query 146212 TACAAAAAGAATCGACTATCCATTTAGTATTACGATTAAGAGGAGGT 146258
| ||||||||||| || |||| ||||| |||||| | | ||||||
Sbjct 4425 TCCAAAAAGAATCTACACTCCACTTAGTTTTACGACTTCGCGGAGGT 4471
Score = 96.9 bits (106), Expect = 5e-15
Identities = 139/196 (71%), Gaps = 0/196 (0%)
Strand=Plus/Plus
Query 146032 TGCAAATATTCATAAAAACATTAACAGGAAAAACAATTACTATTGATGTAGAACATAACG 146091
|||| || || | || || | || || ||||| || || | || || ||| | |
Sbjct 3333 TGCAGATCTTTGTGAAGACTCTTACGGGTAAAACCATCACCCTCGAAGTCGAAGCTTCAG 3392
Query 146092 ATACTATTCAAAATGTAAAAAATAAAATACAACTTAAAGAAGGCATTCCACCCGATCAAC 146151
| |||||| ||||||| ||| ||||| ||| ||||| || ||||| || ||||| |
Sbjct 3393 ACACTATTGAAAATGTGAAAGCCAAAATCCAAGACAAAGAGGGAATTCCCCCGGATCAGC 3452
Query 146152 AAAGACTCATTTTTGCAGGTAAACAATTAGATGATAATAGAACGTTAACAGATTATAATA 146211
| | || |||||||| || |||||| | || ||| ||||| | | ||||||||||
Sbjct 3453 AGCGTCTGATTTTTGCTGGCAAACAACTTGAAGATGGCAGAACTCTCTCTGATTATAATA 3512
Query 146212 TACAAAAAGAATCGAC 146227
| ||||||||||| ||
Sbjct 3513 TTCAAAAAGAATCCAC 3528
Score = 96.9 bits (106), Expect = 5e-15
Identities = 139/196 (71%), Gaps = 0/196 (0%)
Strand=Plus/Plus
Query 146032 TGCAAATATTCATAAAAACATTAACAGGAAAAACAATTACTATTGATGTAGAACATAACG 146091
||||||| ||| | ||||| | || || ||||| ||||| | || || ||| | |
Sbjct 4017 TGCAAATCTTCGTGAAAACTCTCACCGGTAAAACCATTACCCTCGAAGTCGAAGCTTCAG 4076
Query 146092 ATACTATTCAAAATGTAAAAAATAAAATACAACTTAAAGAAGGCATTCCACCCGATCAAC 146151
| || ||| |||| ||||| |||||| || ||||| || |||||||| |||||||
Sbjct 4077 ACACCATTGAAAACGTAAAGGCTAAAATCCAGGACAAAGAGGGAATTCCACCGGATCAAC 4136
Query 146152 AAAGACTCATTTTTGCAGGTAAACAATTAGATGATAATAGAACGTTAACAGATTATAATA 146211
| | || || || || ||||||||| | || ||| ||||| | | || || || |
Sbjct 4137 AGCGTCTGATCTTCGCCGGTAAACAACTGGAAGATGGCAGAACTCTTTCCGACTACAACA 4196
Query 146212 TACAAAAAGAATCGAC 146227
| ||||||||||| ||
Sbjct 4197 TCCAAAAAGAATCCAC 4212
Score = 93.3 bits (102), Expect = 7e-14
Identities = 156/226 (69%), Gaps = 0/226 (0%)
Strand=Plus/Plus
Query 146032 TGCAAATATTCATAAAAACATTAACAGGAAAAACAATTACTATTGATGTAGAACATAACG 146091
||||||| ||| | ||||| | || || ||||| || || |||| || ||| |
Sbjct 3561 TGCAAATCTTCGTGAAAACTCTCACCGGTAAAACCATCACCCTTGAAGTTGAAGCCTCTG 3620
Query 146092 ATACTATTCAAAATGTAAAAAATAAAATACAACTTAAAGAAGGCATTCCACCCGATCAAC 146151
| || || |||| |||||| ||| || ||| |||||||||||||| || || || |
Sbjct 3621 ACACAATAGAAAACGTAAAAGCTAAGATCCAAGACAAAGAAGGCATTCCTCCTGACCAGC 3680
Query 146152 AAAGACTCATTTTTGCAGGTAAACAATTAGATGATAATAGAACGTTAACAGATTATAATA 146211
|| | | || || || |||||||| || || || ||| || | |||| ||||| |
Sbjct 3681 AACGTTTGATCTTCGCTGGTAAACAGTTGGAAGACGGTAGGACACTCTCAGACTATAACA 3740
Query 146212 TACAAAAAGAATCGACTATCCATTTAGTATTACGATTAAGAGGAGG 146257
| || |||||||| ||| | ||| | || | || | |||||||
Sbjct 3741 TCCAGAAAGAATCTACTCTTCATCTGGTTCTGCGTCTTCGAGGAGG 3786
>seq3876
Length=890137
Score = 95.1 bits (104), Expect = 2e-14
Identities = 115/157 (73%), Gaps = 0/157 (0%)
Strand=Plus/Minus
Query 146101 AAAATGTAAAAAATAAAATACAACTTAAAGAAGGCATTCCACCCGATCAACAAAGACTCA 146160
|||| || ||| ||||| || ||||||||||||||| ||||||||||||||||| |
Sbjct 519850 AAAACGTGAAAGCGAAAATTCAGGATAAAGAAGGCATTCCTCCCGATCAACAAAGACTGA 519791
Query 146161 TTTTTGCAGGTAAACAATTAGATGATAATAGAACGTTAACAGATTATAATATACAAAAAG 146220
|||| || || || || |||| ||| | || ||| | || |||||||| || ||||
Sbjct 519790 TTTTCGCGGGCAAGCAGCTAGAGGATGGACGGACTTTATCCGACTATAATATTCAGAAAG 519731
Query 146221 AATCGACTATCCATTTAGTATTACGATTAAGAGGAGG 146257
| || || | || | ||| | ||| | ||||| ||
Sbjct 519730 AGTCTACACTTCACCTTGTACTTCGACTTAGAGGCGG 519694
Score = 86.0 bits (94), Expect = 1e-11
Identities = 158/229 (69%), Gaps = 2/229 (1%)
Strand=Plus/Minus
Query 146032 TGCAAATATTCATAAAAACATTAACAGGAAAAACAATTACTATTGATGTAGAA-CATAAC 146090
||||||| ||| | |||||||| || |||||||| || || | || || || |||
Sbjct 521287 TGCAAATTTTCGTCAAAACATTGACCGGAAAAACCATCACGTTGGAAGTCGAGGCATCT- 521229
Query 146091 GATACTATTCAAAATGTAAAAAATAAAATACAACTTAAAGAAGGCATTCCACCCGATCAA 146150
|| || || ||||||| ||| ||||| ||| |||||||| || || || |||||
Sbjct 521228 GACACGATCGAAAATGTCAAAGCAAAAATTCAAGACAAAGAAGGAATCCCTCCAGATCAG 521169
Query 146151 CAAAGACTCATTTTTGCAGGTAAACAATTAGATGATAATAGAACGTTAACAGATTATAAT 146210
|| ||| | || || || || ||||| | || ||| | || | | || || ||
Sbjct 521168 CAGAGATTGATCTTCGCCGGAAAACAGCTTGAAGATGGCCGCACTCTTTCTGACTACAAC 521109
Query 146211 ATACAAAAAGAATCGACTATCCATTTAGTATTACGATTAAGAGGAGGTA 146259
|| ||||||||||| || | ||||| || | || ||| | || ||||
Sbjct 521108 ATTCAAAAAGAATCCACACTGCATTTGGTTCTCCGTTTACGTGGTGGTA 521060
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 786120969409160
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |