Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Trachymyrmex_20zeteki_20[refseq_20GCF_5F001594055.1_202016-03-31]
4,623 sequences; 267,973,152 total letters
Query= NC_023639.1
Length=1168989
Score E
Sequences producing significant alignments: (Bits) Value
seq3918 237 1e-56
seq3812 208 6e-48
seq4300 118 8e-21
>seq3918
Length=5396348
Score = 237 bits (262), Expect = 1e-56
Identities = 689/1047 (66%), Gaps = 18/1047 (2%)
Strand=Plus/Plus
Query 281442 TACCATTGGCATCCAAATCAAATGTGACTTCAATTTGAGGGACCCCTCTCTGAGCAGGTG 281501
|||||||||| || | ||| || |||||||| ||||| || || ||||| | || || |
Sbjct 2215043 TACCATTGGCGTCGATATCGAAAGTGACTTCGATTTGCGGTACACCTCTAGGCGCCGGAG 2215102
Query 281502 GGATCCCTTCCAAATTAAATGTTCCCAGATTATTATTATCTTTAGTGAATTTTCGTTCAC 281561
| || || || | |||| | || || | ||||||||||| || | || || |
Sbjct 2215103 GAATACCCGTCAGCTCAAATTTGCCGAGGATGTTATTATCTTTCGTCATCGCTCTCTCTC 2215162
Query 281562 CCTCGAAAATTTGGATAGTAACTACAGTTTGATTATCTGAATAAGTTGTAAATACTCTGG 281621
||||| | | |||||| ||| | | |||||| || || || || || || |||||
Sbjct 2215163 CCTCGTAGACCTGGATAAGCACTCCCGGTTGATTGTCGGAGTACGTGGTGAACG-TCTGG 2215221
Query 281622 ATTTTTTACAA-GGAATTGTTGTGTTTCTATCAATAATATTGGTCATAATACCACCAGCT 281680
| | || | || || || ||||| || | || | | ||||||| || |||||
Sbjct 2215222 GTCTGTTTCGTTGGTATCGTCGTGTTCCTTTTGATCAAGGTAGTCATAACGCCGCCAGCG 2215281
Query 281681 GTTTCTAAACCAAGAGAAAGAGGAGTGACATCAACTAGGACAATATTTTGAAGTTTTTCA 281740
|| || | ||| | || | ||||| || || | || | | || ||||| || |||
Sbjct 2215282 GTCTCAATACCCAATGATAACGGAGTCACGTCCAGCAGAAGTAGATCTTGAACTTCCTCA 2215341
Query 281741 TCAGTTTGACCAACAAGAATAGCTGCTTGAATAGCAGCACCATATGCAACAGCTTCATCA 281800
| | || ||||| || || |||| || ||||| || |||||||| || ||
Sbjct 2215342 GACTTGTCGCCGTGCAGAATGGCCGCCTGAACTGCTGCACCGTAAGCAACAGCCTCGTCC 2215401
Query 281801 GGATTAACAGTTTCATTTAGTTTTTTACCATTGAAAAAAT-TTGAAAGAAGTTGTCTTAC 281859
||||| | | || || |||| || || || || |||| ||||| || || | |
Sbjct 2215402 GGATTGATGGATTTGTTCAGTTCCTTGCCGTTAAAGAAATCTTGAAGTAACTTCTGA-AT 2215460
Query 281860 CTTAGGAATACGAGATGATCCTCCAACTAATACAATTTCATGCACCTGTGATTTATCCAG 281919
|| || || | | || || || ||||| || || || || || | ||||||||
Sbjct 2215461 TTTTGGTATCCTGGTGGAGCCACCGACTAAAACGATGCTGTGAACTTGAGCTTTATCCAT 2215520
Query 281920 TTTTGAATCCAATAAAACTTTTTCAACGGGTTCAAGACCAGCTCTAAACAAGTCTGAACA 281979
|| | ||| | | || || || ||||| ||| |||||||| || | ||
Sbjct 2215521 CTTCGCATCTCTAAGCGCCTTCTCCACTGGTTCCAGAGTGCTTCTAAACAGATCGGCGCA 2215580
Query 281980 AAGTTCTTCGAATTTAGCTCTAGTAAGAGTGACAT-TATAA-TCAATTCCTTCGAACAAA 282037
|| || ||||| | |||||||| || ||| | || || ||||| || || |||||
Sbjct 2215581 GAGCTCCTCGAACCTGGCTCTAGT--GACCGACGTATAGAAGTCAATCCCCTCAAACAAT 2215638
Query 282038 GAATCAACTTCAATCGTAGTTTGAGTCGAAGAAGATAGTGCACGTTTAGCACGTTCACAT 282097
||||| | ||||| | | || ||||| || | | | || || | || ||
Sbjct 2215639 GAATCGATCTCAATGCTCGCCTGCGTCGACGAGCTCAACGTTCTCTTCGCTCTCTCGCAA 2215698
Query 282098 GCTGTCCTTAGTCTTCGTAAGG--CTTTTGCTGATTGATTCAAATCTGTTTTATATTTTC 282155
|| ||||| || | || | | || ||| || | | ||| |||| | || ||||| |
Sbjct 2215699 GCAGTCCTCAGACGTCTCAGAGATCTCTTGTTGCT--ACTCAGATCTTTCTTGTATTTCC 2215756
Query 282156 TCTTGAAATCTTCAACACACCATGTTACAAGACGATTATCAAAATCTTCACCTCCCAATT 282215
| ||||| |||| ||| | | || | || || ||||| || || || || | |
Sbjct 2215757 TTTTGAATTCTTGCACAAAGTGATTCACCATTCGGTTGTCAAAGTCCTCGCCACCGAGAT 2215816
Query 282216 TAGTATTTCCTGACGTAGCTCTTACTTGGAAAAGTCCATCTTCAAGAGACAAAAGAGTAA 282275
|| | || | ||| | | | || | ||| | ||||| |||| | ||||| | |
Sbjct 2215817 GCGTGTCGCCGGCCGTGGATTTCACCTCGAAGATACCATCCTCAATCGTCAAAATCGACA 2215876
Query 282276 CATCATGGGTTCCACCACCCATATCAAAAATAAGTACATTCATTTCTTTGTCTT--GGTT 282333
| ||| ||| |||||||||| ||||||||||| |||||| |||| | || | ||
Sbjct 2215877 CGTCAAAGGTACCACCACCCAAGTCAAAAATAAGAACATTCTTTTC---GCCTGCAGCTT 2215933
Query 282334 T-TTATCAAGACCATACGCAAAAGCAGCAGCAGTTGGTTCATTAATAATTCTCAAAACAT 282392
| ||||| ||||||||||| | || || || || || || || || ||||| | ||| |
Sbjct 2215934 TCTTATCGAGACCATACGCTATCGCGGCGGCTGTAGGCTCGTTTATTATTCTGAGAACGT 2215993
Query 282393 TAAGACCAGCAATTCTTCCTGCATCTTTAGTGGCTTGTCTTTGTGAATCGTTAAAATATG 282452
| || |||||||| || ||||| || || ||||| || || || || || ||||| |
Sbjct 2215994 TCAGGCCAGCAATAGCGCCGGCATCCTTTGTCGCTTGCCTCTGAGAGTCATTGAAATAAG 2216053
Query 282453 CAGGAACAGTAATAACGGCATCTGTTA 282479
| || ||||| || ||||||| |||||
Sbjct 2216054 CCGGCACAGTGATGACGGCATTTGTTA 2216080
>seq3812
Length=143806
Score = 208 bits (230), Expect = 6e-48
Identities = 716/1102 (65%), Gaps = 22/1102 (2%)
Strand=Plus/Minus
Query 281381 TTAGTAATAGTAATATTCTTGGATTTGTTTGTTGATTTATCAGCGGCAGTCACATTAAGA 281440
||||| ||||| || || || |||| || || || || |||| | ||||| ||
Sbjct 22896 TTAGTGATAGTGATCTTGTTCTCTTTGCCAGTAGACTTGTCCACGGCGGAGACATTGAGG 22837
Query 281441 ATACCATTGGCATCCAAATCAAATGTGACTTCAATTTGAGGGACCCCTCTCTGAGCAGGT 281500
||||| || ||||| | || || || || ||||| ||||| || || | | || |||
Sbjct 22836 ATACCGTTCGCATCGATGTCGAACGTCACCTCAATCTGAGGAACTCCACGAGGTGCTGGT 22777
Query 281501 GGGATCCCTTCCAAATTAAATGTTCCCAGATTATTATTATCTTTAGTGAATTTTCGTTCA 281560
||||| || | | ||| | ||||| ||| |||||||| || | || |||
Sbjct 22776 GGGATACCACTAAGCTCGAATTTGCCCAGTAGATTGTTATCTTTGGTCATGGCGCGCTCA 22717
Query 281561 CCCTCGAAAATTTGGATAGTAACTACAGTTTGATTATCTGAATAAGTTGTAAATACTCTG 281620
|||||| | | || || || ||| |||||| || | |||||||||||| ||||
Sbjct 22716 CCCTCGTAGACCTGAATCAACACACCAGGTTGATTGTCGGCATAAGTTGTAAA-GGTCTG 22658
Query 281621 -GATTTTTTACAAGGAATTGTTGTGTTTCTATCAATAATATTGGTCATAATACCACCAGC 281679
| | || || || ||||| || || | ||| | |||||| | ||| || ||
Sbjct 22657 AGTCTGCTTTGTCGGGATGGTTGTATTCCTCTTAATGAGCGCGGTCATGACACCGCCGGC 22598
Query 281680 TGTTTCTAAACCAAGAGAAAGAGGAGTGACATCAACTAGGACAATATTTTGAAGTTTTTC 281739
|| || | ||| ||||| || |||||||| |||| ||| | | | ||| | ||
Sbjct 22597 AGTCTCAATACCCAGAGAGAGCGGAGTGACGTCAAGTAGAAGCAAGTCTTGCA---CCTC 22541
Query 281740 ATCAGTTTGACCA----ACAAGAATAGCTGCTTGAATAGCAGCACCATATGCAACAGCTT 281795
|| | || | || |||| ||||| || || | || || |||||||| |||||||
Sbjct 22540 CTCGGATTTATCACCGTGCAAG-ATAGCCGCCTGTACTGCTGCGCCATATGCCACAGCTT 22482
Query 281796 CATCAGGATTAACAGTTTCATTTAGTTTTTTACCATTGAAAAAAT-TTGAAAGAAGTTGT 281854
|||||||||| | || || || || | ||| ||||||||||| | || | || || |
Sbjct 22481 CATCAGGATTGATAGATTTGTTGAGCTCTTTGCCATTGAAAAAGTCCTGTAGGAGCTTCT 22422
Query 281855 CTTACCTTAGGAATACGAGATGATCCTCCAACTAATACAATTTCATGCACCTGTGATTTA 281914
| ||| || || || | || ||||| ||||| || || || || | || | |||
Sbjct 22421 -GAATCTTGGGGATTCGTGTAGAGCCTCCGACTAAGACGATATCGTGGATTTGAGCTTTG 22363
Query 281915 TCCAGTTTTGAATCCAATAAAACTTTTTCAACGGGTTCAAGACCAGCTCTAAACAAGTCT 281974
|||| || | || | || || |||||||||||| | | | || | ||
Sbjct 22362 TCCATCTTGGCGTCGCGCAGCGACTTCTCGACGGGTTCAAGAGTACCGCGGAAGAGATCC 22303
Query 281975 GAACAAAGTTCTTCGAATTTAGCTCTAGTAAGAGTGACATTATAATCAATTCCTTCGAAC 282034
| || ||||| ||||| ||||| || | || | | |||| ||||| ||| ||
Sbjct 22302 GCGCAGAGTTCCTCGAAACGAGCTCGGGTGATAGAGGTGTAGAAATCGATTCCCTCGTAC 22243
Query 282035 AAAGAATCAACTTCAATCGTAGTTTGAGTCGAAGAAGATAGTGCACGTTTAGCACGTTCA 282094
|| ||||| | || || | | ||||| || || || || | || || ||||||||
Sbjct 22242 AACGAATCGATCTCGATGCTGGCCTGAGTGGAGGATGACAGGGTGCGCTTTGCACGTTCG 22183
Query 282095 CATGCTGTCCTTAGTCTTCGTA-AG-GCTTTTGCT-GATTGATTCAAATCTGTTTTATAT 282151
|| || || | ||| | || | || || ||| | || | ||||||| | || |||
Sbjct 22182 CAGGCCGTGCGTAGACGACGAAGAGCGCGTTTATTCGA---AGTCAAATCCTTCTTGTAT 22126
Query 282152 TTTCTCTTGAAATCTTCAACACACCATGTTACAAGACGATTATCAAAATCTTCACCTCCC 282211
|| | |||||| |||| ||| | | || | || ||||| || || ||||| |||
Sbjct 22125 TTGCGCTTGAATTCTTGCACAAAGTGATTGACCATGCGGTTATCGAAGTCCTCACCACCC 22066
Query 282212 AATTTAGTATTTCCTGACGTAGCTCTTACTTGGAAAAGTCCATCTTCAAGAGACAAAAGA 282271
| | ||||| ||| | ||| | | || | ||| | |||||||| | || | |
Sbjct 22065 AGATGAGTATCTCCAGCCGTGGACTTGACCTCGAAGATACCATCTTCTATAGTTAGGATG 22006
Query 282272 GTAACATCATGGGTTCCACCACCCATATCAAAAATAAGTACATTCATTTCTTTGTCTTGG 282331
| || || || |||||||| | |||||| ||||| || || | || |||
Sbjct 22005 GACACGTCGAAAGTGCCACCACCGAGATCAAAGATAAGGACGTT--TCGCTCGCCGGTGG 21948
Query 282332 --TTTTTATCAAGACCATACGCAAAAGCAGCAGCAGTTGGTTCATTAATAATTCTCAAAA 282389
|| || || ||||| || |||| || || || || || || || ||||| | ||| |
Sbjct 21947 CCTTCTTGTCGAGACCGTATGCAATCGCGGCGGCGGTGGGCTCGTTGATAATACGCAATA 21888
Query 282390 CATTAAGACCAGCAATTCTTCCTGCATCTTTAGTGGCTTGTCTTTGTGAATCGTTAAAAT 282449
| || | ||| | || | || || || || || || || | || || ||||| || |
Sbjct 21887 CGTTCAAACCCGAGATGGTACCAGCGTCCTTGGTTGCCTGACGCTGCGAGTCGTTGAAGT 21828
Query 282450 ATGCAGGAACAGTAATAACGGC 282471
| || || || || || || ||
Sbjct 21827 AAGCGGGGACGGTGATCACAGC 21806
>seq4300
Length=3477374
Score = 118 bits (130), Expect = 8e-21
Identities = 122/160 (76%), Gaps = 0/160 (0%)
Strand=Plus/Plus
Query 282322 TTTGTCTTGGTTTTTATCAAGACCATACGCAAAAGCAGCAGCAGTTGGTTCATTAATAAT 282381
||| |||| | |||||| | || || |||| ||||| ||||||||||||||||| |
Sbjct 1327236 TTTATCTTCTTGTTTATCCATTCCGTAAGCAAGTGCAGCTGCAGTTGGTTCATTAATTAC 1327295
Query 282382 TCTCAAAACATTAAGACCAGCAATTCTTCCTGCATCTTTAGTGGCTTGTCTTTGTGAATC 282441
| | ||| || | |||||||| || |||||||| || ||||||| |||||||||
Sbjct 1327296 ACGAAGAACGTTCAATCCAGCAATCTGACCAGCATCTTTTGTTGCTTGTCGTTGTGAATC 1327355
Query 282442 GTTAAAATATGCAGGAACAGTAATAACGGCATCTGTTACT 282481
|||||||| || || ||||||||||| |||| |||||
Sbjct 1327356 ATTAAAATACGCTGGTACAGTAATAACAGCATTCTTTACT 1327395
Score = 116 bits (128), Expect = 3e-20
Identities = 106/134 (79%), Gaps = 0/134 (0%)
Strand=Plus/Plus
Query 86119 CCGTATGCAAGAGCTGCTGCAGTTGGTTCATTAATTATTTTAAGAACATCTAAACCCGCA 86178
||||| ||||| || |||||||||||||||||||||| |||||| | || || |||
Sbjct 1327258 CCGTAAGCAAGTGCAGCTGCAGTTGGTTCATTAATTACACGAAGAACGTTCAATCCAGCA 1327317
Query 86179 ATTTTAGCAGAATCAAGAGTTGCTTGTCTCTGTGCGTCATTAAAATATGCTGGTACAGTA 86238
|| | | ||| ||| |||||||||| |||| ||||||||||| ||||||||||||
Sbjct 1327318 ATCTGACCAGCATCTTTTGTTGCTTGTCGTTGTGAATCATTAAAATACGCTGGTACAGTA 1327377
Query 86239 ATAACTGCTTTATT 86252
||||| || || ||
Sbjct 1327378 ATAACAGCATTCTT 1327391
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 3740403430236798
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |