Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Trachymyrmex_20zeteki_20[refseq_20GCF_5F001594055.1_202016-03-31]
4,623 sequences; 267,973,152 total letters
Query= NC_025257.1
Length=102759
Score E
Sequences producing significant alignments: (Bits) Value
seq3876 145 5e-30
seq4552 107 1e-18
seq4069 89.7 3e-13
>seq3876
Length=890137
Score = 145 bits (160), Expect = 5e-30
Identities = 171/229 (75%), Gaps = 2/229 (1%)
Strand=Plus/Plus
Query 33522 ACCACCTCTCAAACGTAACACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGA 33581
|||||| | ||||| | |||||||| || ||| |||||||| |||||||| || ||
Sbjct 521289 ACCACCACGTAAACGGAGAACCAAATGCAGTGTGGATTCTTTTTGAATGTTGTAGTCAGA 521348
Query 33582 GAGTGTGCGTTCGTCGTCCAATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGG 33641
|| ||||| | || || | ||||||||||| |||||||| | |||||||||| | ||
Sbjct 521349 AAGAGTGCGGCCATCTTCAAGCTGTTTTCCGGCGAAAATCAATCTCTGCTGATCTGGAGG 521408
Query 33642 CACACCTTCTTTGTCGGCAATTTTCTGTTTCAACATAGTC-ACGGTGTCGCTTGATTCCA 33700
| ||||||||||| |||||| || || |||| || | ||||| || || |
Sbjct 521409 GATTCCTTCTTTGTCTTGAATTTT-TGCTTTGACATTTTCGATCGTGTCAGATGCCTCGA 521467
Query 33701 CGTCAACCGTGATCGTTTTACCTGTTAACGTTTTTACAAAGATCTGCAT 33749
| || | |||||| ||||| ||||| | ||||| ||||||||||||||
Sbjct 521468 CTTCCAACGTGATGGTTTTTCCTGTCAGGGTTTTGACAAAGATCTGCAT 521516
Score = 129 bits (142), Expect = 4e-25
Identities = 168/230 (73%), Gaps = 2/230 (1%)
Strand=Plus/Plus
Query 33522 ACCACCTCTCAAACGTAACACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGA 33581
|||||| | ||||| | |||||||| || ||| |||||||| |||||||| || ||
Sbjct 521061 ACCACCACGTAAACGGAGAACCAAATGCAGTGTGGATTCTTTTTGAATGTTGTAGTCAGA 521120
Query 33582 GAGTGTGCGTTCGTCGTCCAATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGG 33641
|| ||||| | || || | ||||||||||| || ||||| | |||||||||| | ||
Sbjct 521121 AAGAGTGCGGCCATCTTCAAGCTGTTTTCCGGCGAAGATCAATCTCTGCTGATCTGGAGG 521180
Query 33642 CACACCTTCTTTGTCGGCAATTTTCTGTTTCAACATAGTC-ACGGTGTCGCTTGATTCCA 33700
| ||||||||||| |||||| || || |||| || | ||||| || || |
Sbjct 521181 GATTCCTTCTTTGTCTTGAATTTT-TGCTTTGACATTTTCGATCGTGTCAGATGCCTCGA 521239
Query 33701 CGTCAACCGTGATCGTTTTACCTGTTAACGTTTTTACAAAGATCTGCATA 33750
| || | |||||| ||||| || || || ||||| || || || ||||||
Sbjct 521240 CTTCCAACGTGATGGTTTTTCCGGTCAATGTTTTGACGAAAATTTGCATA 521289
Score = 105 bits (116), Expect = 4e-18
Identities = 163/230 (71%), Gaps = 2/230 (1%)
Strand=Plus/Plus
Query 33522 ACCACCTCTCAAACGTAACACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGA 33581
|||||| | ||||| | |||||||| || ||| || || || || ||||| || ||
Sbjct 520833 ACCACCACGTAAACGGAGAACCAAATGCAGTGTGGATTCCTTCTGAATATTGTAGTCAGA 520892
Query 33582 GAGTGTGCGTTCGTCGTCCAATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGG 33641
|||||||| | || || | |||||||| ||||| ||||| | |||||||| | ||
Sbjct 520893 AAGTGTGCGGCCATCTTCAAGCTGTTTTCCAGCAAAGATCAATCTTTGCTGATCCGGAGG 520952
Query 33642 CACACCTTCTTTGTCGGCAATTTTCTGTTTCAACATAGTC-ACGGTGTCGCTTGATTCCA 33700
| ||||||||||| |||||| || || |||| || | ||||| || || |
Sbjct 520953 GATTCCTTCTTTGTCTTGAATTTT-TGCTTTGACATTTTCGATCGTGTCAGATGCCTCAA 521011
Query 33701 CGTCAACCGTGATCGTTTTACCTGTTAACGTTTTTACAAAGATCTGCATA 33750
| || | |||||| || || || || || ||||| || || || ||||||
Sbjct 521012 CTTCCAACGTGATGGTCTTTCCGGTCAATGTTTTGACGAAAATTTGCATA 521061
Score = 104 bits (114), Expect = 2e-17
Identities = 162/229 (71%), Gaps = 2/229 (1%)
Strand=Plus/Plus
Query 33523 CCACCTCTCAAACGTAACACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGAG 33582
||||| | ||||| | |||||||| | ||| || || || ||||| ||||| ||
Sbjct 520378 CCACCACGTAAACGAAGAACCAAATGCAAAGTCGATTCCTTCTGAATGTTATAATCTGAA 520437
Query 33583 AGTGTGCGTTCGTCGTCCAATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGGC 33642
|||||||| |||| || | ||||||||||| || ||||| | |||||| || | ||
Sbjct 520438 AGTGTGCGACCGTCTTCAAGCTGTTTTCCGGCGAAGATCAACCTCTGCTGGTCCGGGGGG 520497
Query 33643 ACACCTTCTTTGTCGGCAATTTTCTGTTTCAACATAGTC-ACGGTGTCGCTTGATTCCAC 33701
| ||||| ||||| |||||| || || || | || | ||||| | ||| ||
Sbjct 520498 ATTCCTTCCTTGTCCTGAATTTT-TGCTTTCACGTTCTCAATCGTGTCCGACGCTTCGAC 520556
Query 33702 GTCAACCGTGATCGTTTTACCTGTTAACGTTTTTACAAAGATCTGCATA 33750
|| | ||||| || ||||| || | |||||| ||||| || ||||||
Sbjct 520557 TTCCAGAGTGATTGTCTTACCGGTGAGCGTTTTGACAAAAATTTGCATA 520605
Score = 104 bits (114), Expect = 2e-17
Identities = 163/231 (71%), Gaps = 2/231 (1%)
Strand=Plus/Plus
Query 33523 CCACCTCTCAAACGTAACACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGAG 33582
||||| | ||| | | |||||||| |||||| || || || || |||||||||||
Sbjct 521518 CCACCACGCAATCTGAGGACCAAATGGAGAGTGGATTCCTTCTGAATATTGTAATCGGAT 521577
Query 33583 AGTGTGCGTTCGTCGTCCAATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGGC 33642
| || ||| |||| || | || ||||| || || ||||||||||||||||| | ||
Sbjct 521578 AAGGTACGTCCGTCTTCAAGCTGCTTTCCAGCGAAGATCAAACGCTGCTGATCGGGTGGG 521637
Query 33643 ACACCTTCTTTGTCGGCAATTTTCTGTTTCAACATAGTC-ACGGTGTCGCTTGATTCCAC 33701
| |||||| || || || || || || |||| || | |||||| | ||| ||
Sbjct 521638 ATACCTTCCTTATCTTGGATCTT-TGCTTTTACATTCTCGATGGTGTCAGAAGCTTCAAC 521696
Query 33702 GTCAACCGTGATCGTTTTACCTGTTAACGTTTTTACAAAGATCTGCATAGT 33752
|||| || || || || || || || || || || || |||||||||||
Sbjct 521697 TTCAAGGGTTATGGTCTTCCCGGTCAATGTCTTCACGAAAATCTGCATAGT 521747
Score = 95.1 bits (104), Expect = 8e-15
Identities = 151/214 (71%), Gaps = 2/214 (1%)
Strand=Plus/Plus
Query 33538 AACACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGAGAGTGTGCGTTCGTCG 33597
|| |||||||| || || || || || ||||| ||||| || || || || ||||
Sbjct 519937 AAAACCAAATGCAGGGTAGATTCCTTCTGAATGTTATAATCAGAAAGCGTACGGCCGTCT 519996
Query 33598 TCCAATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGGCACACCTTCTTTGTCG 33657
|| | |||||||||||||| ||||| | ||||||||| | || | |||||||| ||
Sbjct 519997 TCGAGCTGTTTTCCGGCAAAGATCAACCTCTGCTGATCGGGAGGAATGCCTTCTTTATCT 520056
Query 33658 GCAATTTTCTGTTTCAACATAGTC-ACGGTGTCGCTTGATTCCACGTCAACCGTGATCGT 33716
||||||| ||| || | || | ||||| | || || || | ||||| ||
Sbjct 520057 TGAATTTTCGCCTTC-ACGTTTTCGATCGTGTCCGAAGCCTCAACCTCCAGTGTGATAGT 520115
Query 33717 TTTACCTGTTAACGTTTTTACAAAGATCTGCATA 33750
|||||| || | || || ||||| |||||||||
Sbjct 520116 TTTACCAGTGAGAGTCTTGACAAAAATCTGCATA 520149
Score = 93.3 bits (102), Expect = 3e-14
Identities = 150/213 (70%), Gaps = 2/213 (1%)
Strand=Plus/Plus
Query 33538 AACACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGAGAGTGTGCGTTCGTCG 33597
|| || ||||| || || || || || ||||| ||||| || || || || ||||
Sbjct 520165 AAAACTAAATGCAGGGTAGATTCCTTCTGAATGTTATAATCAGAAAGCGTACGGCCGTCT 520224
Query 33598 TCCAATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGGCACACCTTCTTTGTCG 33657
|| | |||||||||||||| ||||| | |||||||||| | || | ||||| |||||
Sbjct 520225 TCGAGCTGTTTTCCGGCAAAGATCAACCTCTGCTGATCTGGAGGGATTCCTTCCTTGTCT 520284
Query 33658 GCAATTTTCTGTTTCAACATAGTC-ACGGTGTCGCTTGATTCCACGTCAACCGTGATCGT 33716
|||||| | || |||| || | ||||| | || || || | |||||| ||
Sbjct 520285 TGAATTTT-GGCTTTGACATTCTCGATCGTGTCCGACGCCTCAACTTCCAACGTGATGGT 520343
Query 33717 TTTACCTGTTAACGTTTTTACAAAGATCTGCAT 33749
|| |||||||| || || || || || |||||
Sbjct 520344 CTTTCCTGTTAATGTCTTGACGAAAATTTGCAT 520376
Score = 84.2 bits (92), Expect = 1e-11
Identities = 149/215 (69%), Gaps = 2/215 (1%)
Strand=Plus/Plus
Query 33537 TAACACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGAGAGTGTGCGTTCGTC 33596
||| |||||||| | ||| || ||||| |||||||| || || || || || | ||
Sbjct 520620 TAAAACCAAATGCAATGTGGATTCCTTTTGAATGTTGTAGTCAGAAAGGGTACGGCCATC 520679
Query 33597 GTCCAATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGGCACACCTTCTTTGTC 33656
|| | ||||||||||| || ||||| | |||||| || | || | ||||| |||||
Sbjct 520680 TTCAAGCTGTTTTCCGGCGAAGATCAACCTCTGCTGGTCCGGAGGGATTCCTTCCTTGTC 520739
Query 33657 GGCAATTTTCTGTTTCAACATAGTC-ACGGTGTCGCTTGATTCCACGTCAACCGTGATCG 33715
|||||| || || || | || | ||||| || || || || | ||||| |
Sbjct 520740 CTGAATTTT-TGCTTTCACGTTCTCAATCGTGTCAGATGCCTCAACTTCCAATGTGATGG 520798
Query 33716 TTTTACCTGTTAACGTTTTTACAAAGATCTGCATA 33750
| || || || || ||||| || || || ||||||
Sbjct 520799 TCTTTCCGGTCAATGTTTTGACGAAAATTTGCATA 520833
>seq4552
Length=86203
Score = 107 bits (118), Expect = 1e-18
Identities = 162/228 (71%), Gaps = 2/228 (1%)
Strand=Plus/Minus
Query 33523 CCACCTCTCAAACGTAACACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGAG 33582
|| |||| | ||| | |||| ||| || ||| |||||||| || || ||||| |||
Sbjct 3558 CCTCCTCGAAGACGCAGAACCAGATGAAGTGTGGATTCTTTTTGAATATTATAATCAGAG 3499
Query 33583 AGTGTGCGTTCGTCGTCCAATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGGC 33642
|| || | | || || | |||||| || |||||||||| |||||||||||| | ||
Sbjct 3498 AGAGTTCTGCCATCTTCAAGTTGTTTGCCAGCAAAAATCAGACGCTGCTGATCCGGGGGA 3439
Query 33643 ACACCTTCTTTGTCGGCAATTTTCTGTTTCAACATAGTC-ACGGTGTCGCTTGATTCCAC 33701
| || |||||||| ||||| |||| |||| || | ||||| | ||| ||
Sbjct 3438 ATTCCCTCTTTGTCTTGGATTTTGGCTTTC-ACATTTTCAATAGTGTCTGAAGCTTCGAC 3380
Query 33702 GTCAACCGTGATCGTTTTACCTGTTAACGTTTTTACAAAGATCTGCAT 33749
|| | ||||| |||||||| || | || || ||||||||||||||
Sbjct 3379 TTCGAGGGTGATGGTTTTACCCGTAAGAGTCTTCACAAAGATCTGCAT 3332
Score = 107 bits (118), Expect = 1e-18
Identities = 155/216 (72%), Gaps = 2/216 (1%)
Strand=Plus/Minus
Query 33535 CGTAACACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGAGAGTGTGCGTTCG 33594
||||| || || || || || |||||||| ||||||||||| || || || | ||
Sbjct 4458 CGTAAAACTAAGTGGAGTGTAGATTCTTTTTGGATGTTGTAATCAGAAAGAGTTCTGCCG 4399
Query 33595 TCGTCCAATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGGCACACCTTCTTTG 33654
|| |||| ||| || || || || || |||||||| |||||| | || | |||||||||
Sbjct 4398 TCTTCCAGTTGCTTGCCAGCGAAGATTAAACGCTGTTGATCTGGAGGGATTCCTTCTTTG 4339
Query 33655 TCGGCAATTTTCTGTTTCAACATAGTC-ACGGTGTCGCTTGATTCCACGTCAACCGTGAT 33713
|| |||||| ||| || | || | ||||| | ||| || |||| |||||
Sbjct 4338 TCCTGAATTTTGGCCTTC-ACGTTTTCAATAGTGTCTGAAGCTTCGACTTCAAGAGTGAT 4280
Query 33714 CGTTTTACCTGTTAACGTTTTTACAAAGATCTGCAT 33749
||||||||||| | ||||| ||||| || |||||
Sbjct 4279 GGTTTTACCTGTGAGAGTTTTCACAAAAATTTGCAT 4244
Score = 100 bits (110), Expect = 2e-16
Identities = 139/192 (72%), Gaps = 2/192 (1%)
Strand=Plus/Minus
Query 33559 TCTTTTTGTATGTTGTAATCGGAGAGTGTGCGTTCGTCGTCCAATTGTTTTCCGGCAAAA 33618
|| || || |||||||||||||| || || | | || || | ||| ||||| |||||
Sbjct 3294 TCCTTCTGGATGTTGTAATCGGAAAGGGTTCTGCCATCCTCTAGTTGCTTTCCAGCAAAG 3235
Query 33619 ATCAAACGCTGCTGATCTTGCGGCACACCTTCTTTGTCGGCAATTTTCTGTTTCAACATA 33678
|| ||||| ||||||||| | || | |||||||||||| || || | || || |
Sbjct 3234 ATTAAACGTTGCTGATCTGGAGGAATACCTTCTTTGTCTTGGATCTT-AGCTTTGACGTT 3176
Query 33679 GTC-ACGGTGTCGCTTGATTCCACGTCAACCGTGATCGTTTTACCTGTTAACGTTTTTAC 33737
|| | ||||| | |||||| |||| ||||| ||||| || || | ||||||||
Sbjct 3175 CTCTATAGTGTCAGAAGCTTCCACCTCAAGGGTGATGGTTTTCCCAGTGAGGGTTTTTAC 3116
Query 33738 AAAGATCTGCAT 33749
|||||| |||||
Sbjct 3115 AAAGATTTGCAT 3104
Score = 98.7 bits (108), Expect = 7e-16
Identities = 160/228 (70%), Gaps = 2/228 (1%)
Strand=Plus/Minus
Query 33523 CCACCTCTCAAACGTAACACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGAG 33582
|| |||| | ||| | |||| ||| ||||| ||||| || ||||| || || |||
Sbjct 4014 CCTCCTCGAAGACGCAGAACCAGATGAAGAGTAGATTCTTTCTGGATGTTATAGTCTGAG 3955
Query 33583 AGTGTGCGTTCGTCGTCCAATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGGC 33642
||||| | |||| ||||| ||||| || || || |||||||| ||||| || | ||
Sbjct 3954 AGTGTCCTACCGTCTTCCAACTGTTTACCAGCGAAGATCAAACGTTGCTGGTCAGGAGGA 3895
Query 33643 ACACCTTCTTTGTCGGCAATTTTCTGTTTCAACATAGTC-ACGGTGTCGCTTGATTCCAC 33701
| ||||||||||| ||||| | || || | || | ||||| | ||| ||
Sbjct 3894 ATGCCTTCTTTGTCTTGGATTTT-AGCTTTTACGTTTTCTATTGTGTCAGAGGCTTCAAC 3836
Query 33702 GTCAACCGTGATCGTTTTACCTGTTAACGTTTTTACAAAGATCTGCAT 33749
|||| ||||| |||||||| || | ||||| || ||||| |||||
Sbjct 3835 TTCAAGAGTGATGGTTTTACCGGTGAGAGTTTTCACGAAGATTTGCAT 3788
Score = 93.3 bits (102), Expect = 3e-14
Identities = 159/228 (70%), Gaps = 2/228 (1%)
Strand=Plus/Minus
Query 33523 CCACCTCTCAAACGTAACACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGAG 33582
|| |||| | ||| | |||| ||| ||||| ||||| || ||||| || || |||
Sbjct 3786 CCTCCTCGAAGACGCAGAACCAGATGAAGAGTAGATTCTTTCTGGATGTTATAGTCTGAG 3727
Query 33583 AGTGTGCGTTCGTCGTCCAATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGGC 33642
||||| | |||| ||||| ||||| || || || |||||||| ||||| || | ||
Sbjct 3726 AGTGTCCTACCGTCTTCCAACTGTTTACCAGCGAAGATCAAACGTTGCTGGTCAGGAGGA 3667
Query 33643 ACACCTTCTTTGTCGGCAATTTTCTGTTTCAACATAGTC-ACGGTGTCGCTTGATTCCAC 33701
| ||||||||||| || || | || || | || | ||||| | ||| ||
Sbjct 3666 ATGCCTTCTTTGTCTTGGATCTT-AGCTTTTACGTTTTCTATTGTGTCAGAGGCTTCAAC 3608
Query 33702 GTCAACCGTGATCGTTTTACCTGTTAACGTTTTTACAAAGATCTGCAT 33749
|||| ||||| |||||||| || | ||||| || ||||| |||||
Sbjct 3607 TTCAAGGGTGATGGTTTTACCGGTGAGAGTTTTCACGAAGATTTGCAT 3560
>seq4069
Length=1127261
Score = 89.7 bits (98), Expect = 3e-13
Identities = 136/191 (71%), Gaps = 2/191 (1%)
Strand=Plus/Minus
Query 33560 CTTTTTGTATGTTGTAATCGGAGAGTGTGCGTTCGTCGTCCAATTGTTTTCCGGCAAAAA 33619
||||||| || || |||||||| || |||||| | || |||| |||||| ||||| || |
Sbjct 161737 CTTTTTGGATATTATAATCGGACAGAGTGCGTCCATCCTCCAGTTGTTTGCCGGCGAAGA 161678
Query 33620 TCAAACGCTGCTGATCTTGCGGCACACCTTCTTTGTCGGCAATTTTCTGTTTCAACATAG 33679
| | ||||| |||||| |||| | || || ||||| || || || | |||
Sbjct 161677 TGAGTCGCTGTTGATCTGGCGGAATTCCCTCCTTGTCCTGGATCTTGGCCTTGA-CATTC 161619
Query 33680 TC-ACGGTGTCGCTTGATTCCACGTCAACCGTGATCGTTTTACCTGTTAACGTTTTTACA 33738
|| | ||| ||| | || || || | ||||| |||||||| || | ||||| ||
Sbjct 161618 TCGATGGTATCGGAGGCCTCTACCTCGAGGGTGATGGTTTTACCCGTGAGGGTTTTCACG 161559
Query 33739 AAGATCTGCAT 33749
|||||||||||
Sbjct 161558 AAGATCTGCAT 161548
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 328685479892160
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