Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Trachymyrmex_20zeteki_20[refseq_20GCF_5F001594055.1_202016-03-31]
4,623 sequences; 267,973,152 total letters
Query= NC_025412.1
Length=369360
Score E
Sequences producing significant alignments: (Bits) Value
seq4552 138 3e-27
seq3876 138 3e-27
>seq4552
Length=86203
Score = 138 bits (152), Expect = 3e-27
Identities = 157/208 (75%), Gaps = 2/208 (1%)
Strand=Plus/Plus
Query 206185 AAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGACACAGTCGAATCA 206244
||||| ||||| || ||||| |||||| | ||||| ||| ||||||||| | |||
Sbjct 3803 AAAACTCTCACCGGTAAAACCATCACTCTTGAAGTTGAAGCCTCTGACACAATAGAAAAC 3862
Query 206245 GTAAA-GCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAAAGACTTATCTT 206303
||||| || ||| || ||||| |||||||| ||| || ||| ||| | | |||||
Sbjct 3863 GTAAAAGCTAAA-ATCCAAGACAAAGAAGGCATTCCTCCTGACCAGCAACGTTTGATCTT 3921
Query 206304 CGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTCCAGAAAGAGTC 206363
||| || || ||||||||||| || ||||| | | || || ||| |||||||||| ||
Sbjct 3922 CGCTGGTAAACAGTTGGAAGACGGTAGGACACTCTCAGACTATAACATCCAGAAAGAATC 3981
Query 206364 TACTCTTCACCTTGTTTTGAGACTTCGA 206391
||||||||| || ||| || | ||||||
Sbjct 3982 TACTCTTCATCTGGTTCTGCGTCTTCGA 4009
Score = 134 bits (148), Expect = 3e-26
Identities = 154/207 (74%), Gaps = 0/207 (0%)
Strand=Plus/Plus
Query 206185 AAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGACACAGTCGAATCA 206244
||||| ||||| || ||||| ||||| | ||||| ||| ||||||||| | |||
Sbjct 3575 AAAACTCTCACCGGTAAAACCATCACCCTTGAAGTTGAAGCCTCTGACACAATAGAAAAC 3634
Query 206245 GTAAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAAAGACTTATCTTC 206304
||||| ||||| ||||| |||||||| ||| || ||| ||| | | ||||||
Sbjct 3635 GTAAAAGCTAAGATCCAAGACAAAGAAGGCATTCCTCCTGACCAGCAACGTTTGATCTTC 3694
Query 206305 GCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTCCAGAAAGAGTCT 206364
|| || || ||||||||||| || ||||| | | || || ||| |||||||||| |||
Sbjct 3695 GCTGGTAAACAGTTGGAAGACGGTAGGACACTCTCAGACTATAACATCCAGAAAGAATCT 3754
Query 206365 ACTCTTCACCTTGTTTTGAGACTTCGA 206391
|||||||| || ||| || | ||||||
Sbjct 3755 ACTCTTCATCTGGTTCTGCGTCTTCGA 3781
Score = 122 bits (134), Expect = 2e-22
Identities = 154/209 (74%), Gaps = 6/209 (3%)
Strand=Plus/Plus
Query 206185 AAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGACACAGTCGAATCA 206244
||||| |||||||| ||||| |||||| | ||||| ||| ||| ||||| | |||
Sbjct 4259 AAAACTCTCACAGGTAAAACCATCACTCTTGAAGTCGAAGCTTCAGACACTATTGAAAAC 4318
Query 206245 GTAAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAA-AGACTT--ATC 206301
|| ||| || ||||| || ||||||||||| || || |||| || || |||
Sbjct 4319 GTGAAGGCCAAAATTCAGGACAAAGAAGGAATCCCTCCAGA---TCAACAGCGTTTAATC 4375
Query 206302 TTCGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTCCAGAAAGAG 206361
||||| || ||||| ||||||| || || ||| | | ||||||||| |||| |||||
Sbjct 4376 TTCGCTGGCAAGCAACTGGAAGACGGCAGAACTCTTTCTGATTACAACATCCAAAAAGAA 4435
Query 206362 TCTACTCTTCACCTTGTTTTGAGACTTCG 206390
||||| || ||| | ||||| |||||||
Sbjct 4436 TCTACACTCCACTTAGTTTTACGACTTCG 4464
Score = 118 bits (130), Expect = 3e-21
Identities = 152/207 (73%), Gaps = 2/207 (1%)
Strand=Plus/Plus
Query 206185 AAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGACACAGTCGAATCA 206244
||||| ||||| || ||||| ||||| | || |||||| ||||||||| | ||
Sbjct 3119 AAAACCCTCACTGGGAAAACCATCACCCTTGAGGTGGAAGCTTCTGACACTATAGAGAAC 3178
Query 206245 GT-AAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAAAGACTTATCTT 206303
|| ||||| || ||| ||||| |||||||| ||| || || ||| | | |||||
Sbjct 3179 GTCAAAGCTAA-GATCCAAGACAAAGAAGGTATTCCTCCAGATCAGCAACGTTTAATCTT 3237
Query 206304 CGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTCCAGAAAGAGTC 206363
|| |||||||| | || ||||| || || | ||||||||||| ||||||| || ||
Sbjct 3238 TGCTGGAAAGCAACTAGAGGATGGCAGAACCCTTTCCGATTACAACATCCAGAAGGAATC 3297
Query 206364 TACTCTTCACCTTGTTTTGAGACTTCG 206390
||| ||||| |||||| || | |||||
Sbjct 3298 TACACTTCATCTTGTTCTGCGTCTTCG 3324
Score = 116 bits (128), Expect = 9e-21
Identities = 150/207 (72%), Gaps = 0/207 (0%)
Strand=Plus/Plus
Query 206185 AAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGACACAGTCGAATCA 206244
||||| ||||| || ||||| || || | ||||| ||| ||| ||||| | |||
Sbjct 4031 AAAACTCTCACCGGTAAAACCATTACCCTCGAAGTCGAAGCTTCAGACACCATTGAAAAC 4090
Query 206245 GTAAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAAAGACTTATCTTC 206304
|||||| || || || || ||||| |||||| ||||| || | || ||||||
Sbjct 4091 GTAAAGGCTAAAATCCAGGACAAAGAGGGAATTCCACCGGATCAACAGCGTCTGATCTTC 4150
Query 206305 GCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTCCAGAAAGAGTCT 206364
||||| || || |||||||||| || ||| | |||| |||||| |||| ||||| ||
Sbjct 4151 GCCGGTAAACAACTGGAAGATGGCAGAACTCTTTCCGACTACAACATCCAAAAAGAATCC 4210
Query 206365 ACTCTTCACCTTGTTTTGAGACTTCGA 206391
|| |||||| | ||| || | ||||||
Sbjct 4211 ACACTTCACTTGGTTCTGCGTCTTCGA 4237
Score = 86.0 bits (94), Expect = 1e-11
Identities = 82/105 (78%), Gaps = 0/105 (0%)
Strand=Plus/Minus
Query 204751 TCGAAGTCTCAAAACAAGGTGAAGAGTAGACTCTTTCTGGACATTATAGTCAGCCAAAGT 204810
|||||| | || ||| || ||||||||||| |||||||||| |||||||| | | ||
Sbjct 3781 TCGAAGACGCAGAACCAGATGAAGAGTAGATTCTTTCTGGATGTTATAGTCTGAGAGTGT 3722
Query 204811 CCTTCCATCTTCCAGCTGCTTTCCGGCGAAGATAAGCCGTTGTTG 204855
||| || ||||||| ||| || || |||||||| | ||||| ||
Sbjct 3721 CCTACCGTCTTCCAACTGTTTACCAGCGAAGATCAAACGTTGCTG 3677
Score = 86.0 bits (94), Expect = 1e-11
Identities = 82/105 (78%), Gaps = 0/105 (0%)
Strand=Plus/Minus
Query 204751 TCGAAGTCTCAAAACAAGGTGAAGAGTAGACTCTTTCTGGACATTATAGTCAGCCAAAGT 204810
|||||| | || ||| || ||||||||||| |||||||||| |||||||| | | ||
Sbjct 4009 TCGAAGACGCAGAACCAGATGAAGAGTAGATTCTTTCTGGATGTTATAGTCTGAGAGTGT 3950
Query 204811 CCTTCCATCTTCCAGCTGCTTTCCGGCGAAGATAAGCCGTTGTTG 204855
||| || ||||||| ||| || || |||||||| | ||||| ||
Sbjct 3949 CCTACCGTCTTCCAACTGTTTACCAGCGAAGATCAAACGTTGCTG 3905
Score = 84.2 bits (92), Expect = 5e-11
Identities = 82/106 (77%), Gaps = 0/106 (0%)
Strand=Plus/Minus
Query 204751 TCGAAGTCTCAAAACAAGGTGAAGAGTAGACTCTTTCTGGACATTATAGTCAGCCAAAGT 204810
|||||| | || ||| | |||||| || || ||||| |||| || ||||| | | |||
Sbjct 4237 TCGAAGACGCAGAACCAAGTGAAGTGTGGATTCTTTTTGGATGTTGTAGTCGGAAAGAGT 4178
Query 204811 CCTTCCATCTTCCAGCTGCTTTCCGGCGAAGATAAGCCGTTGTTGA 204856
|| ||||||||||| || || ||||||||||| || || ||||||
Sbjct 4177 TCTGCCATCTTCCAGTTGTTTACCGGCGAAGATCAGACGCTGTTGA 4132
>seq3876
Length=890137
Score = 138 bits (152), Expect = 3e-27
Identities = 164/220 (75%), Gaps = 2/220 (1%)
Strand=Plus/Minus
Query 206173 CAGATATTTTGCAAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGAC 206232
||||| ||| ||| || ||||| || ||||| ||||| |||| || || ||| |||
Sbjct 519917 CAGATTTTTGTCAAGACTCTCACTGGTAAAACTATCACACTGGAGGTTGAGGCTTCGGAC 519858
Query 206233 ACAGTCGAATCAGT-AAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCA 206291
|| ||||| || ||||| ||| ||||| || |||||||| ||| || || ||
Sbjct 519857 ACGATCGAAAACGTGAAAGCGAAA-ATTCAGGATAAAGAAGGCATTCCTCCCGATCAACA 519799
Query 206292 AAGACTTATCTTCGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGT 206351
|||||| || ||||| || |||||| | || |||||| ||||||| |||| || || |
Sbjct 519798 AAGACTGATTTTCGCGGGCAAGCAGCTAGAGGATGGACGGACTTTATCCGACTATAATAT 519739
Query 206352 CCAGAAAGAGTCTACTCTTCACCTTGTTTTGAGACTTCGA 206391
|||||||||||||| ||||||||||| | ||||| ||
Sbjct 519738 TCAGAAAGAGTCTACACTTCACCTTGTACTTCGACTTAGA 519699
Score = 125 bits (138), Expect = 2e-23
Identities = 150/201 (75%), Gaps = 2/201 (1%)
Strand=Plus/Minus
Query 206173 CAGATATTTTGCAAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGAC 206232
||||| ||| |||||| || ||||||||||| ||||| |||||||| || ||||||
Sbjct 521513 CAGATCTTTGTCAAAACCCTGACAGGAAAAACCATCACGTTGGAAGTCGAGGCATCTGAC 521454
Query 206233 ACAGTCGAATCAGT-AAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCA 206291
|| ||||| || ||||||||| |||||||| ||||||||||| || || ||
Sbjct 521453 ACGATCGAAAATGTCAAAGCAAAA-ATTCAAGACAAAGAAGGAATCCCTCCAGATCAGCA 521395
Query 206292 AAGACTTATCTTCGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGT 206351
||| | || ||||||||||| ||| | |||||||| | ||| | | || |||||| |
Sbjct 521394 GAGATTGATTTTCGCCGGAAAACAGCTTGAAGATGGCCGCACTCTTTCTGACTACAACAT 521335
Query 206352 CCAGAAAGAGTCTACTCTTCA 206372
|| ||||| || || || ||
Sbjct 521334 TCAAAAAGAATCCACACTGCA 521314
Score = 114 bits (126), Expect = 3e-20
Identities = 141/190 (74%), Gaps = 2/190 (1%)
Strand=Plus/Minus
Query 206184 CAAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGACACAGTCGAATC 206243
|||||| | || |||||||| ||||| |||||||| || |||||||| |||||
Sbjct 521274 CAAAACATTGACCGGAAAAACCATCACGTTGGAAGTCGAGGCATCTGACACGATCGAAAA 521215
Query 206244 AGT-AAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAAAGACTTATCT 206302
|| ||||||||| |||||||| ||||||||||| || || || ||| | ||||
Sbjct 521214 TGTCAAAGCAAAA-ATTCAAGACAAAGAAGGAATCCCTCCAGATCAGCAGAGATTGATCT 521156
Query 206303 TCGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTCCAGAAAGAGT 206362
|||||||||| ||| | |||||||| | ||| | | || |||||| | || ||||| |
Sbjct 521155 TCGCCGGAAAACAGCTTGAAGATGGCCGCACTCTTTCTGACTACAACATTCAAAAAGAAT 521096
Query 206363 CTACTCTTCA 206372
| || || ||
Sbjct 521095 CCACACTGCA 521086
Score = 102 bits (112), Expect = 2e-16
Identities = 86/106 (81%), Gaps = 0/106 (0%)
Strand=Plus/Plus
Query 204751 TCGAAGTCTCAAAACAAGGTGAAGAGTAGACTCTTTCTGGACATTATAGTCAGCCAAAGT 204810
|| ||||| | ||||||||||| |||||||||||||| | ||||||||| | |||||
Sbjct 519699 TCTAAGTCGAAGTACAAGGTGAAGTGTAGACTCTTTCTGAATATTATAGTCGGATAAAGT 519758
Query 204811 CCTTCCATCTTCCAGCTGCTTTCCGGCGAAGATAAGCCGTTGTTGA 204856
|| |||||| || |||||||| || ||||| || || | |||||||
Sbjct 519759 CCGTCCATCCTCTAGCTGCTTGCCCGCGAAAATCAGTCTTTGTTGA 519804
Score = 102 bits (112), Expect = 2e-16
Identities = 138/190 (73%), Gaps = 2/190 (1%)
Strand=Plus/Minus
Query 206184 CAAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGACACAGTCGAATC 206243
|||||| | || ||||| || ||||| |||||||| || |||||||| |||||
Sbjct 521046 CAAAACATTGACCGGAAAGACCATCACGTTGGAAGTTGAGGCATCTGACACGATCGAAAA 520987
Query 206244 AGT-AAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAAAGACTTATCT 206302
|| ||||||||| |||||||| ||||||||||| ||||| |||||| | ||||
Sbjct 520986 TGTCAAAGCAAAA-ATTCAAGACAAAGAAGGAATCCCTCCGGATCAGCAAAGATTGATCT 520928
Query 206303 TCGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTCCAGAAAGAGT 206362
| || ||||| ||| | |||||||| | || | | || ||||| | ||||| || |
Sbjct 520927 TTGCTGGAAAACAGCTTGAAGATGGCCGCACACTTTCTGACTACAATATTCAGAAGGAAT 520868
Query 206363 CTACTCTTCA 206372
| || || ||
Sbjct 520867 CCACACTGCA 520858
Score = 100 bits (110), Expect = 7e-16
Identities = 139/191 (73%), Gaps = 3/191 (2%)
Strand=Plus/Minus
Query 206179 TTTTG-CAAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGACACAGT 206237
||||| |||||||||||| || || || |||||| ||||||| ||| || ||||| |
Sbjct 520596 TTTTGTCAAAACGCTCACCGGTAAGACAATCACTCTGGAAGTCGAAGCGTCGGACACGAT 520537
Query 206238 CGAATCAGT-AAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAAAGAC 206296
|| || ||||||||| ||||| || || |||||||| |||||| || ||
Sbjct 520536 TGAGAACGTGAAAGCAAAA-ATTCAGGACAAGGAAGGAATCCCCCCGGACCAGCAGAGGT 520478
Query 206297 TTATCTTCGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTCCAGA 206356
| |||||||||||||| ||| | ||||| || | || | | ||||| ||| | ||||
Sbjct 520477 TGATCTTCGCCGGAAAACAGCTTGAAGACGGTCGCACACTTTCAGATTATAACATTCAGA 520418
Query 206357 AAGAGTCTACT 206367
| || || |||
Sbjct 520417 AGGAATCGACT 520407
Score = 93.3 bits (102), Expect = 1e-13
Identities = 147/208 (71%), Gaps = 2/208 (1%)
Strand=Plus/Minus
Query 206184 CAAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGACACAGTCGAATC 206243
|||||| | || ||||| || ||||| |||||||| || |||||||| | ||
Sbjct 520818 CAAAACATTGACCGGAAAGACCATCACATTGGAAGTTGAGGCATCTGACACGATTGAGAA 520759
Query 206244 AGT-AAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAAAGACTTATCT 206302
|| ||||||||| ||||| || || |||||||| |||||| || || | ||||
Sbjct 520758 CGTGAAAGCAAAA-ATTCAGGACAAGGAAGGAATCCCTCCGGACCAGCAGAGGTTGATCT 520700
Query 206303 TCGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTCCAGAAAGAGT 206362
|||||||||| ||| | |||||||| | || | | || |||||| | || || || |
Sbjct 520699 TCGCCGGAAAACAGCTTGAAGATGGCCGTACCCTTTCTGACTACAACATTCAAAAGGAAT 520640
Query 206363 CTACTCTTCACCTTGTTTTGAGACTTCG 206390
| || | || | ||||| || |||||
Sbjct 520639 CCACATTGCATTTGGTTTTAAGGCTTCG 520612
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1181750798168783
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |