Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Trachymyrmex_20zeteki_20[refseq_20GCF_5F001594055.1_202016-03-31] 4,623 sequences; 267,973,152 total letters Query= NC_025412.1 Length=369360 Score E Sequences producing significant alignments: (Bits) Value seq4552 138 3e-27 seq3876 138 3e-27 >seq4552 Length=86203 Score = 138 bits (152), Expect = 3e-27 Identities = 157/208 (75%), Gaps = 2/208 (1%) Strand=Plus/Plus Query 206185 AAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGACACAGTCGAATCA 206244 ||||| ||||| || ||||| |||||| | ||||| ||| ||||||||| | ||| Sbjct 3803 AAAACTCTCACCGGTAAAACCATCACTCTTGAAGTTGAAGCCTCTGACACAATAGAAAAC 3862 Query 206245 GTAAA-GCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAAAGACTTATCTT 206303 ||||| || ||| || ||||| |||||||| ||| || ||| ||| | | ||||| Sbjct 3863 GTAAAAGCTAAA-ATCCAAGACAAAGAAGGCATTCCTCCTGACCAGCAACGTTTGATCTT 3921 Query 206304 CGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTCCAGAAAGAGTC 206363 ||| || || ||||||||||| || ||||| | | || || ||| |||||||||| || Sbjct 3922 CGCTGGTAAACAGTTGGAAGACGGTAGGACACTCTCAGACTATAACATCCAGAAAGAATC 3981 Query 206364 TACTCTTCACCTTGTTTTGAGACTTCGA 206391 ||||||||| || ||| || | |||||| Sbjct 3982 TACTCTTCATCTGGTTCTGCGTCTTCGA 4009 Score = 134 bits (148), Expect = 3e-26 Identities = 154/207 (74%), Gaps = 0/207 (0%) Strand=Plus/Plus Query 206185 AAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGACACAGTCGAATCA 206244 ||||| ||||| || ||||| ||||| | ||||| ||| ||||||||| | ||| Sbjct 3575 AAAACTCTCACCGGTAAAACCATCACCCTTGAAGTTGAAGCCTCTGACACAATAGAAAAC 3634 Query 206245 GTAAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAAAGACTTATCTTC 206304 ||||| ||||| ||||| |||||||| ||| || ||| ||| | | |||||| Sbjct 3635 GTAAAAGCTAAGATCCAAGACAAAGAAGGCATTCCTCCTGACCAGCAACGTTTGATCTTC 3694 Query 206305 GCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTCCAGAAAGAGTCT 206364 || || || ||||||||||| || ||||| | | || || ||| |||||||||| ||| Sbjct 3695 GCTGGTAAACAGTTGGAAGACGGTAGGACACTCTCAGACTATAACATCCAGAAAGAATCT 3754 Query 206365 ACTCTTCACCTTGTTTTGAGACTTCGA 206391 |||||||| || ||| || | |||||| Sbjct 3755 ACTCTTCATCTGGTTCTGCGTCTTCGA 3781 Score = 122 bits (134), Expect = 2e-22 Identities = 154/209 (74%), Gaps = 6/209 (3%) Strand=Plus/Plus Query 206185 AAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGACACAGTCGAATCA 206244 ||||| |||||||| ||||| |||||| | ||||| ||| ||| ||||| | ||| Sbjct 4259 AAAACTCTCACAGGTAAAACCATCACTCTTGAAGTCGAAGCTTCAGACACTATTGAAAAC 4318 Query 206245 GTAAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAA-AGACTT--ATC 206301 || ||| || ||||| || ||||||||||| || || |||| || || ||| Sbjct 4319 GTGAAGGCCAAAATTCAGGACAAAGAAGGAATCCCTCCAGA---TCAACAGCGTTTAATC 4375 Query 206302 TTCGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTCCAGAAAGAG 206361 ||||| || ||||| ||||||| || || ||| | | ||||||||| |||| ||||| Sbjct 4376 TTCGCTGGCAAGCAACTGGAAGACGGCAGAACTCTTTCTGATTACAACATCCAAAAAGAA 4435 Query 206362 TCTACTCTTCACCTTGTTTTGAGACTTCG 206390 ||||| || ||| | ||||| ||||||| Sbjct 4436 TCTACACTCCACTTAGTTTTACGACTTCG 4464 Score = 118 bits (130), Expect = 3e-21 Identities = 152/207 (73%), Gaps = 2/207 (1%) Strand=Plus/Plus Query 206185 AAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGACACAGTCGAATCA 206244 ||||| ||||| || ||||| ||||| | || |||||| ||||||||| | || Sbjct 3119 AAAACCCTCACTGGGAAAACCATCACCCTTGAGGTGGAAGCTTCTGACACTATAGAGAAC 3178 Query 206245 GT-AAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAAAGACTTATCTT 206303 || ||||| || ||| ||||| |||||||| ||| || || ||| | | ||||| Sbjct 3179 GTCAAAGCTAA-GATCCAAGACAAAGAAGGTATTCCTCCAGATCAGCAACGTTTAATCTT 3237 Query 206304 CGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTCCAGAAAGAGTC 206363 || |||||||| | || ||||| || || | ||||||||||| ||||||| || || Sbjct 3238 TGCTGGAAAGCAACTAGAGGATGGCAGAACCCTTTCCGATTACAACATCCAGAAGGAATC 3297 Query 206364 TACTCTTCACCTTGTTTTGAGACTTCG 206390 ||| ||||| |||||| || | ||||| Sbjct 3298 TACACTTCATCTTGTTCTGCGTCTTCG 3324 Score = 116 bits (128), Expect = 9e-21 Identities = 150/207 (72%), Gaps = 0/207 (0%) Strand=Plus/Plus Query 206185 AAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGACACAGTCGAATCA 206244 ||||| ||||| || ||||| || || | ||||| ||| ||| ||||| | ||| Sbjct 4031 AAAACTCTCACCGGTAAAACCATTACCCTCGAAGTCGAAGCTTCAGACACCATTGAAAAC 4090 Query 206245 GTAAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAAAGACTTATCTTC 206304 |||||| || || || || ||||| |||||| ||||| || | || |||||| Sbjct 4091 GTAAAGGCTAAAATCCAGGACAAAGAGGGAATTCCACCGGATCAACAGCGTCTGATCTTC 4150 Query 206305 GCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTCCAGAAAGAGTCT 206364 ||||| || || |||||||||| || ||| | |||| |||||| |||| ||||| || Sbjct 4151 GCCGGTAAACAACTGGAAGATGGCAGAACTCTTTCCGACTACAACATCCAAAAAGAATCC 4210 Query 206365 ACTCTTCACCTTGTTTTGAGACTTCGA 206391 || |||||| | ||| || | |||||| Sbjct 4211 ACACTTCACTTGGTTCTGCGTCTTCGA 4237 Score = 86.0 bits (94), Expect = 1e-11 Identities = 82/105 (78%), Gaps = 0/105 (0%) Strand=Plus/Minus Query 204751 TCGAAGTCTCAAAACAAGGTGAAGAGTAGACTCTTTCTGGACATTATAGTCAGCCAAAGT 204810 |||||| | || ||| || ||||||||||| |||||||||| |||||||| | | || Sbjct 3781 TCGAAGACGCAGAACCAGATGAAGAGTAGATTCTTTCTGGATGTTATAGTCTGAGAGTGT 3722 Query 204811 CCTTCCATCTTCCAGCTGCTTTCCGGCGAAGATAAGCCGTTGTTG 204855 ||| || ||||||| ||| || || |||||||| | ||||| || Sbjct 3721 CCTACCGTCTTCCAACTGTTTACCAGCGAAGATCAAACGTTGCTG 3677 Score = 86.0 bits (94), Expect = 1e-11 Identities = 82/105 (78%), Gaps = 0/105 (0%) Strand=Plus/Minus Query 204751 TCGAAGTCTCAAAACAAGGTGAAGAGTAGACTCTTTCTGGACATTATAGTCAGCCAAAGT 204810 |||||| | || ||| || ||||||||||| |||||||||| |||||||| | | || Sbjct 4009 TCGAAGACGCAGAACCAGATGAAGAGTAGATTCTTTCTGGATGTTATAGTCTGAGAGTGT 3950 Query 204811 CCTTCCATCTTCCAGCTGCTTTCCGGCGAAGATAAGCCGTTGTTG 204855 ||| || ||||||| ||| || || |||||||| | ||||| || Sbjct 3949 CCTACCGTCTTCCAACTGTTTACCAGCGAAGATCAAACGTTGCTG 3905 Score = 84.2 bits (92), Expect = 5e-11 Identities = 82/106 (77%), Gaps = 0/106 (0%) Strand=Plus/Minus Query 204751 TCGAAGTCTCAAAACAAGGTGAAGAGTAGACTCTTTCTGGACATTATAGTCAGCCAAAGT 204810 |||||| | || ||| | |||||| || || ||||| |||| || ||||| | | ||| Sbjct 4237 TCGAAGACGCAGAACCAAGTGAAGTGTGGATTCTTTTTGGATGTTGTAGTCGGAAAGAGT 4178 Query 204811 CCTTCCATCTTCCAGCTGCTTTCCGGCGAAGATAAGCCGTTGTTGA 204856 || ||||||||||| || || ||||||||||| || || |||||| Sbjct 4177 TCTGCCATCTTCCAGTTGTTTACCGGCGAAGATCAGACGCTGTTGA 4132 >seq3876 Length=890137 Score = 138 bits (152), Expect = 3e-27 Identities = 164/220 (75%), Gaps = 2/220 (1%) Strand=Plus/Minus Query 206173 CAGATATTTTGCAAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGAC 206232 ||||| ||| ||| || ||||| || ||||| ||||| |||| || || ||| ||| Sbjct 519917 CAGATTTTTGTCAAGACTCTCACTGGTAAAACTATCACACTGGAGGTTGAGGCTTCGGAC 519858 Query 206233 ACAGTCGAATCAGT-AAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCA 206291 || ||||| || ||||| ||| ||||| || |||||||| ||| || || || Sbjct 519857 ACGATCGAAAACGTGAAAGCGAAA-ATTCAGGATAAAGAAGGCATTCCTCCCGATCAACA 519799 Query 206292 AAGACTTATCTTCGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGT 206351 |||||| || ||||| || |||||| | || |||||| ||||||| |||| || || | Sbjct 519798 AAGACTGATTTTCGCGGGCAAGCAGCTAGAGGATGGACGGACTTTATCCGACTATAATAT 519739 Query 206352 CCAGAAAGAGTCTACTCTTCACCTTGTTTTGAGACTTCGA 206391 |||||||||||||| ||||||||||| | ||||| || Sbjct 519738 TCAGAAAGAGTCTACACTTCACCTTGTACTTCGACTTAGA 519699 Score = 125 bits (138), Expect = 2e-23 Identities = 150/201 (75%), Gaps = 2/201 (1%) Strand=Plus/Minus Query 206173 CAGATATTTTGCAAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGAC 206232 ||||| ||| |||||| || ||||||||||| ||||| |||||||| || |||||| Sbjct 521513 CAGATCTTTGTCAAAACCCTGACAGGAAAAACCATCACGTTGGAAGTCGAGGCATCTGAC 521454 Query 206233 ACAGTCGAATCAGT-AAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCA 206291 || ||||| || ||||||||| |||||||| ||||||||||| || || || Sbjct 521453 ACGATCGAAAATGTCAAAGCAAAA-ATTCAAGACAAAGAAGGAATCCCTCCAGATCAGCA 521395 Query 206292 AAGACTTATCTTCGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGT 206351 ||| | || ||||||||||| ||| | |||||||| | ||| | | || |||||| | Sbjct 521394 GAGATTGATTTTCGCCGGAAAACAGCTTGAAGATGGCCGCACTCTTTCTGACTACAACAT 521335 Query 206352 CCAGAAAGAGTCTACTCTTCA 206372 || ||||| || || || || Sbjct 521334 TCAAAAAGAATCCACACTGCA 521314 Score = 114 bits (126), Expect = 3e-20 Identities = 141/190 (74%), Gaps = 2/190 (1%) Strand=Plus/Minus Query 206184 CAAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGACACAGTCGAATC 206243 |||||| | || |||||||| ||||| |||||||| || |||||||| ||||| Sbjct 521274 CAAAACATTGACCGGAAAAACCATCACGTTGGAAGTCGAGGCATCTGACACGATCGAAAA 521215 Query 206244 AGT-AAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAAAGACTTATCT 206302 || ||||||||| |||||||| ||||||||||| || || || ||| | |||| Sbjct 521214 TGTCAAAGCAAAA-ATTCAAGACAAAGAAGGAATCCCTCCAGATCAGCAGAGATTGATCT 521156 Query 206303 TCGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTCCAGAAAGAGT 206362 |||||||||| ||| | |||||||| | ||| | | || |||||| | || ||||| | Sbjct 521155 TCGCCGGAAAACAGCTTGAAGATGGCCGCACTCTTTCTGACTACAACATTCAAAAAGAAT 521096 Query 206363 CTACTCTTCA 206372 | || || || Sbjct 521095 CCACACTGCA 521086 Score = 102 bits (112), Expect = 2e-16 Identities = 86/106 (81%), Gaps = 0/106 (0%) Strand=Plus/Plus Query 204751 TCGAAGTCTCAAAACAAGGTGAAGAGTAGACTCTTTCTGGACATTATAGTCAGCCAAAGT 204810 || ||||| | ||||||||||| |||||||||||||| | ||||||||| | ||||| Sbjct 519699 TCTAAGTCGAAGTACAAGGTGAAGTGTAGACTCTTTCTGAATATTATAGTCGGATAAAGT 519758 Query 204811 CCTTCCATCTTCCAGCTGCTTTCCGGCGAAGATAAGCCGTTGTTGA 204856 || |||||| || |||||||| || ||||| || || | ||||||| Sbjct 519759 CCGTCCATCCTCTAGCTGCTTGCCCGCGAAAATCAGTCTTTGTTGA 519804 Score = 102 bits (112), Expect = 2e-16 Identities = 138/190 (73%), Gaps = 2/190 (1%) Strand=Plus/Minus Query 206184 CAAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGACACAGTCGAATC 206243 |||||| | || ||||| || ||||| |||||||| || |||||||| ||||| Sbjct 521046 CAAAACATTGACCGGAAAGACCATCACGTTGGAAGTTGAGGCATCTGACACGATCGAAAA 520987 Query 206244 AGT-AAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAAAGACTTATCT 206302 || ||||||||| |||||||| ||||||||||| ||||| |||||| | |||| Sbjct 520986 TGTCAAAGCAAAA-ATTCAAGACAAAGAAGGAATCCCTCCGGATCAGCAAAGATTGATCT 520928 Query 206303 TCGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTCCAGAAAGAGT 206362 | || ||||| ||| | |||||||| | || | | || ||||| | ||||| || | Sbjct 520927 TTGCTGGAAAACAGCTTGAAGATGGCCGCACACTTTCTGACTACAATATTCAGAAGGAAT 520868 Query 206363 CTACTCTTCA 206372 | || || || Sbjct 520867 CCACACTGCA 520858 Score = 100 bits (110), Expect = 7e-16 Identities = 139/191 (73%), Gaps = 3/191 (2%) Strand=Plus/Minus Query 206179 TTTTG-CAAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGACACAGT 206237 ||||| |||||||||||| || || || |||||| ||||||| ||| || ||||| | Sbjct 520596 TTTTGTCAAAACGCTCACCGGTAAGACAATCACTCTGGAAGTCGAAGCGTCGGACACGAT 520537 Query 206238 CGAATCAGT-AAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAAAGAC 206296 || || ||||||||| ||||| || || |||||||| |||||| || || Sbjct 520536 TGAGAACGTGAAAGCAAAA-ATTCAGGACAAGGAAGGAATCCCCCCGGACCAGCAGAGGT 520478 Query 206297 TTATCTTCGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTCCAGA 206356 | |||||||||||||| ||| | ||||| || | || | | ||||| ||| | |||| Sbjct 520477 TGATCTTCGCCGGAAAACAGCTTGAAGACGGTCGCACACTTTCAGATTATAACATTCAGA 520418 Query 206357 AAGAGTCTACT 206367 | || || ||| Sbjct 520417 AGGAATCGACT 520407 Score = 93.3 bits (102), Expect = 1e-13 Identities = 147/208 (71%), Gaps = 2/208 (1%) Strand=Plus/Minus Query 206184 CAAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGACACAGTCGAATC 206243 |||||| | || ||||| || ||||| |||||||| || |||||||| | || Sbjct 520818 CAAAACATTGACCGGAAAGACCATCACATTGGAAGTTGAGGCATCTGACACGATTGAGAA 520759 Query 206244 AGT-AAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAAAGACTTATCT 206302 || ||||||||| ||||| || || |||||||| |||||| || || | |||| Sbjct 520758 CGTGAAAGCAAAA-ATTCAGGACAAGGAAGGAATCCCTCCGGACCAGCAGAGGTTGATCT 520700 Query 206303 TCGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTCCAGAAAGAGT 206362 |||||||||| ||| | |||||||| | || | | || |||||| | || || || | Sbjct 520699 TCGCCGGAAAACAGCTTGAAGATGGCCGTACCCTTTCTGACTACAACATTCAAAAGGAAT 520640 Query 206363 CTACTCTTCACCTTGTTTTGAGACTTCG 206390 | || | || | ||||| || ||||| Sbjct 520639 CCACATTGCATTTGGTTTTAAGGCTTCG 520612 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1181750798168783