Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Trachymyrmex_20zeteki_20[refseq_20GCF_5F001594055.1_202016-03-31] 4,623 sequences; 267,973,152 total letters Query= NC_026268.1 Length=139132 Score E Sequences producing significant alignments: (Bits) Value seq3876 125 6e-24 seq4552 122 8e-23 seq4212 107 2e-18 seq4069 93.3 4e-14 >seq3876 Length=890137 Score = 125 bits (138), Expect = 6e-24 Identities = 153/209 (73%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 25175 ATGCAAGTGTTTGTAAAAACATTAACCGGAAAATCGATCACGATCGAAGTCGAAGCCAAC 25234 |||||| | || || |||||||| ||||||||| | |||||| | |||||||| || Sbjct 521288 ATGCAAATTTTCGTCAAAACATTGACCGGAAAAACCATCACGTTGGAAGTCGAGGCATCT 521229 Query 25235 GATACTATCGAGCAAGTAAAACAAAAAATTACCGATAAAGAGGGTATACCGCCCGATCAG 25294 || || ||||| | || ||| ||||||| || ||||| || || || || |||||| Sbjct 521228 GACACGATCGAAAATGTCAAAGCAAAAATTCAAGACAAAGAAGGAATCCCTCCAGATCAG 521169 Query 25295 CAAAGACTCATTTACGGCGGCAAACAACTCGAAGATGATAGAAATGTCAGCGATTACAAT 25354 || ||| | || | || ||| ||||| || ||||||| | | | | || ||||| Sbjct 521168 CAGAGATTGATCTTCGCCGGAAAACAGCTTGAAGATGGCCGCACTCTTTCTGACTACAAC 521109 Query 25355 ATTCAAAAAGAATCCACCATTCATTTAGT 25383 ||||||||||||||||| | ||||| || Sbjct 521108 ATTCAAAAAGAATCCACACTGCATTTGGT 521080 Score = 116 bits (128), Expect = 3e-21 Identities = 151/209 (72%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 25175 ATGCAAGTGTTTGTAAAAACATTAACCGGAAAATCGATCACGATCGAAGTCGAAGCCAAC 25234 ||||| | ||||| ||||| | || |||||| | |||||| | |||||||| || Sbjct 521516 ATGCAGATCTTTGTCAAAACCCTGACAGGAAAAACCATCACGTTGGAAGTCGAGGCATCT 521457 Query 25235 GATACTATCGAGCAAGTAAAACAAAAAATTACCGATAAAGAGGGTATACCGCCCGATCAG 25294 || || ||||| | || ||| ||||||| || ||||| || || || || |||||| Sbjct 521456 GACACGATCGAAAATGTCAAAGCAAAAATTCAAGACAAAGAAGGAATCCCTCCAGATCAG 521397 Query 25295 CAAAGACTCATTTACGGCGGCAAACAACTCGAAGATGATAGAAATGTCAGCGATTACAAT 25354 || ||| | |||| || ||| ||||| || ||||||| | | | | || ||||| Sbjct 521396 CAGAGATTGATTTTCGCCGGAAAACAGCTTGAAGATGGCCGCACTCTTTCTGACTACAAC 521337 Query 25355 ATTCAAAAAGAATCCACCATTCATTTAGT 25383 ||||||||||||||||| | ||||| || Sbjct 521336 ATTCAAAAAGAATCCACACTGCATTTGGT 521308 Score = 102 bits (112), Expect = 7e-17 Identities = 148/209 (71%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 25175 ATGCAAGTGTTTGTAAAAACATTAACCGGAAAATCGATCACGATCGAAGTCGAAGCCAAC 25234 |||||| | || || |||||||| |||||||| | |||||| | ||||| || || Sbjct 521060 ATGCAAATTTTCGTCAAAACATTGACCGGAAAGACCATCACGTTGGAAGTTGAGGCATCT 521001 Query 25235 GATACTATCGAGCAAGTAAAACAAAAAATTACCGATAAAGAGGGTATACCGCCCGATCAG 25294 || || ||||| | || ||| ||||||| || ||||| || || || || |||||| Sbjct 521000 GACACGATCGAAAATGTCAAAGCAAAAATTCAAGACAAAGAAGGAATCCCTCCGGATCAG 520941 Query 25295 CAAAGACTCATTTACGGCGGCAAACAACTCGAAGATGATAGAAATGTCAGCGATTACAAT 25354 |||||| | || | | || ||||| || ||||||| | | | || |||||| Sbjct 520940 CAAAGATTGATCTTTGCTGGAAAACAGCTTGAAGATGGCCGCACACTTTCTGACTACAAT 520881 Query 25355 ATTCAAAAAGAATCCACCATTCATTTAGT 25383 ||||| || |||||||| | ||||| || Sbjct 520880 ATTCAGAAGGAATCCACACTGCATTTGGT 520852 Score = 93.3 bits (102), Expect = 4e-14 Identities = 158/229 (69%), Gaps = 0/229 (0%) Strand=Plus/Minus Query 25175 ATGCAAGTGTTTGTAAAAACATTAACCGGAAAATCGATCACGATCGAAGTCGAAGCCAAC 25234 ||||| | || || || ||||| ||||| || | || || | ||||| ||||| Sbjct 521744 ATGCAGATTTTCGTGAAGACATTGACCGGGAAGACCATAACCCTTGAAGTTGAAGCTTCT 521685 Query 25235 GATACTATCGAGCAAGTAAAACAAAAAATTACCGATAAAGAGGGTATACCGCCCGATCAG 25294 || || |||||| | |||||| ||| || ||||| || ||||| || ||||||||| Sbjct 521684 GACACCATCGAGAATGTAAAAGCAAAGATCCAAGATAAGGAAGGTATCCCACCCGATCAG 521625 Query 25295 CAAAGACTCATTTACGGCGGCAAACAACTCGAAGATGATAGAAATGTCAGCGATTACAAT 25354 || | | || | || || || || || ||||| | | | | |||||||||| Sbjct 521624 CAGCGTTTGATCTTCGCTGGAAAGCAGCTTGAAGACGGACGTACCTTATCCGATTACAAT 521565 Query 25355 ATTCAAAAAGAATCCACCATTCATTTAGTGTTAAGATTGAGAGGAGGAA 25403 ||||| || |||||||| | ||||| || | |||||| | || |||| Sbjct 521564 ATTCAGAAGGAATCCACTCTCCATTTGGTCCTCAGATTGCGTGGTGGAA 521516 Score = 82.4 bits (90), Expect = 7e-11 Identities = 146/211 (69%), Gaps = 4/211 (2%) Strand=Plus/Minus Query 25175 ATGCAAGTGTTTGTAAAAACATTAACCGGAAAATCGATCACGATCGAAGTCGAAGCCAAC 25234 |||||| | ||||| ||||| | ||||| || | ||||| | ||||||||||| Sbjct 520604 ATGCAAATTTTTGTCAAAACGCTCACCGGTAAGACAATCACTCTGGAAGTCGAAGCGTCG 520545 Query 25235 GATACTATCGAGCAAGTAAAACAAAAAATTACCGATAAAGAGGGTATACCGCCCGATCAG 25294 || || || ||| | || ||| ||||||| || || || || || || || || ||| Sbjct 520544 GACACGATTGAGAACGTGAAAGCAAAAATTCAGGACAAGGAAGGAATCCCCCCGGACCAG 520485 Query 25295 CAAAGACTCATTTACGGCGGCAAACAACTCGAAGATGATAG--AAATGTCAGCGATTACA 25352 || || | || | || ||| ||||| || ||||| | | | | | ||| ||||| | Sbjct 520484 CAGAGGTTGATCTTCGCCGGAAAACAGCTTGAAGACGGTCGCACACTTTCA--GATTATA 520427 Query 25353 ATATTCAAAAAGAATCCACCATTCATTTAGT 25383 | ||||| || ||||| || | ||||| || Sbjct 520426 ACATTCAGAAGGAATCGACTTTGCATTTGGT 520396 >seq4552 Length=86203 Score = 122 bits (134), Expect = 8e-23 Identities = 150/205 (73%), Gaps = 0/205 (0%) Strand=Plus/Plus Query 25174 CATGCAAGTGTTTGTAAAAACATTAACCGGAAAATCGATCACGATCGAAGTCGAAGCCAA 25233 |||||| | ||||| || || | || || ||| | ||||| ||||||||||||| Sbjct 3331 CATGCAGATCTTTGTGAAGACTCTTACGGGTAAAACCATCACCCTCGAAGTCGAAGCTTC 3390 Query 25234 CGATACTATCGAGCAAGTAAAACAAAAAATTACCGATAAAGAGGGTATACCGCCCGATCA 25293 || ||||| || | || ||| ||||| || |||||||| || || || ||||| Sbjct 3391 AGACACTATTGAAAATGTGAAAGCCAAAATCCAAGACAAAGAGGGAATTCCCCCGGATCA 3450 Query 25294 GCAAAGACTCATTTACGGCGGCAAACAACTCGAAGATGATAGAAATGTCAGCGATTACAA 25353 ||| | || |||| | ||||||||||| ||||||| |||| | || ||||| || Sbjct 3451 GCAGCGTCTGATTTTTGCTGGCAAACAACTTGAAGATGGCAGAACTCTCTCTGATTATAA 3510 Query 25354 TATTCAAAAAGAATCCACCATTCAT 25378 |||||||||||||||||| ||||| Sbjct 3511 TATTCAAAAAGAATCCACACTTCAT 3535 Score = 107 bits (118), Expect = 2e-18 Identities = 149/209 (71%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 25175 ATGCAAGTGTTTGTAAAAACATTAACCGGAAAATCGATCACGATCGAAGTCGAAGCCAAC 25234 |||||| | || || ||||| | ||||| ||| | || || ||||||||||||| Sbjct 4016 ATGCAAATCTTCGTGAAAACTCTCACCGGTAAAACCATTACCCTCGAAGTCGAAGCTTCA 4075 Query 25235 GATACTATCGAGCAAGTAAAACAAAAAATTACCGATAAAGAGGGTATACCGCCCGATCAG 25294 || || || || | ||||| ||||| || |||||||| || || || ||||| Sbjct 4076 GACACCATTGAAAACGTAAAGGCTAAAATCCAGGACAAAGAGGGAATTCCACCGGATCAA 4135 Query 25295 CAAAGACTCATTTACGGCGGCAAACAACTCGAAGATGATAGAAATGTCAGCGATTACAAT 25354 || | || || | || ||| |||||||| ||||||| |||| | | ||| ||||| Sbjct 4136 CAGCGTCTGATCTTCGCCGGTAAACAACTGGAAGATGGCAGAACTCTTTCCGACTACAAC 4195 Query 25355 ATTCAAAAAGAATCCACCATTCATTTAGT 25383 || |||||||||||||| |||| || || Sbjct 4196 ATCCAAAAAGAATCCACACTTCACTTGGT 4224 Score = 95.1 bits (104), Expect = 1e-14 Identities = 157/227 (69%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 25175 ATGCAAGTGTTTGTAAAAACATTAACCGGAAAATCGATCACGATCGAAGTCGAAGCCAAC 25234 |||||| | ||||| ||||| | || || ||| | ||||| | ||||||||||| Sbjct 4244 ATGCAAATTTTTGTGAAAACTCTCACAGGTAAAACCATCACTCTTGAAGTCGAAGCTTCA 4303 Query 25235 GATACTATCGAGCAAGTAAAACAAAAAATTACCGATAAAGAGGGTATACCGCCCGATCAG 25294 || ||||| || | || || |||||| || ||||| || || || || ||||| Sbjct 4304 GACACTATTGAAAACGTGAAGGCCAAAATTCAGGACAAAGAAGGAATCCCTCCAGATCAA 4363 Query 25295 CAAAGACTCATTTACGGCGGCAAACAACTCGAAGATGATAGAAATGTCAGCGATTACAAT 25354 || | | || | || ||||| ||||| ||||| | |||| | | |||||||| Sbjct 4364 CAGCGTTTAATCTTCGCTGGCAAGCAACTGGAAGACGGCAGAACTCTTTCTGATTACAAC 4423 Query 25355 ATTCAAAAAGAATCCACCATTCATTTAGTGTTAAGATTGAGAGGAGG 25401 || ||||||||||| || | || ||||| ||| || | | ||||| Sbjct 4424 ATCCAAAAAGAATCTACACTCCACTTAGTTTTACGACTTCGCGGAGG 4470 Score = 82.4 bits (90), Expect = 7e-11 Identities = 143/208 (69%), Gaps = 0/208 (0%) Strand=Plus/Plus Query 25171 CAACATGCAAGTGTTTGTAAAAACATTAACCGGAAAATCGATCACGATCGAAGTCGAAGC 25230 || ||||||| | ||||||||||| | || || ||| | ||||| | || || ||||| Sbjct 3100 CATCATGCAAATCTTTGTAAAAACCCTCACTGGGAAAACCATCACCCTTGAGGTGGAAGC 3159 Query 25231 CAACGATACTATCGAGCAAGTAAAACAAAAAATTACCGATAAAGAGGGTATACCGCCCGA 25290 || ||||| ||| | || ||| || || || ||||| ||||| || || || Sbjct 3160 TTCTGACACTATAGAGAACGTCAAAGCTAAGATCCAAGACAAAGAAGGTATTCCTCCAGA 3219 Query 25291 TCAGCAAAGACTCATTTACGGCGGCAAACAACTCGAAGATGATAGAAATGTCAGCGATTA 25350 ||||||| | | || | | || || ||||| || |||| |||| | |||||| Sbjct 3220 TCAGCAACGTTTAATCTTTGCTGGAAAGCAACTAGAGGATGGCAGAACCCTTTCCGATTA 3279 Query 25351 CAATATTCAAAAAGAATCCACCATTCAT 25378 ||| || || || ||||| || ||||| Sbjct 3280 CAACATCCAGAAGGAATCTACACTTCAT 3307 >seq4212 Length=4365329 Score = 107 bits (118), Expect = 2e-18 Identities = 219/323 (68%), Gaps = 2/323 (1%) Strand=Plus/Minus Query 137390 TACCGATAGGTCTGTGTTTAAAATTTGATATTTGAGCGCTAACAAGCGGATAAAAGTTTG 137449 |||| ||||||||||||||| ||| ||| ||| | | | ||||||||||| Sbjct 3415685 TACCAATAGGTCTGTGTTTACGATTAGATGTTTTCGTTTCTTCGATAGGATAAAAGTTAA 3415626 Query 137450 CGTCTATAATTCTATTGAGATTGTTAGTAACGACTCTGGACACTTTGTAGAGCAATTCGA 137509 |||| || | | ||| ||||| |||||||||| | | ||| | | || |||| Sbjct 3415625 CGTCAATGACTTTATCTAGATTACGAGTAACGACTTTCGCGACTGTTTTAAGTTTATCGA 3415566 Query 137510 AATCGAAGCTTTTAGACTGTTTGTTAGCAAAATTATTGACGGCAATAGAGGCTAAGTTGC 137569 ||||||| |||| | | | | ||| | || | ||||| || ||||| ||||| |||| Sbjct 3415565 AATCGAAAGTTTTGGTGTCTATATTAACGAACATGTTGACAGCGATAGATGCTAAATTGC 3415506 Query 137570 ATACGGCCGTTTCTGTATTGTCGCTGTATTGTACAATTTCGGCGCAAAGATTGCTGTTTC 137629 |||| || |||| | | ||||| | |||||||| ||| | |||||| | Sbjct 3415505 ATACAGCGACTTCTCCAGGACCAGAGTATTCAATAATTTCGGTGCACAAGTTGCTGCATT 3415446 Query 137630 GGATCACTCCCAAATTCTTTTGA-TTGTTTTTCTCGTTGACGTGATCTTTATATATCATA 137688 ||| || | || || ||| ||| ||||| ||| |||||||| || | |||| Sbjct 3415445 TGATAGTGCCTATATGCTGATGATTTGATTTTC-GATTGCAATGATCTTTGTAAAGCATA 3415387 Query 137689 TACGGAGTTCCGGTTTCGACTTG 137711 || || ||||| ||||| ||||| Sbjct 3415386 TAAGGTGTTCCAGTTTCTACTTG 3415364 >seq4069 Length=1127261 Score = 93.3 bits (102), Expect = 4e-14 Identities = 137/194 (71%), Gaps = 0/194 (0%) Strand=Plus/Plus Query 25171 CAACATGCAAGTGTTTGTAAAAACATTAACCGGAAAATCGATCACGATCGAAGTCGAAGC 25230 || |||||| | || || ||||| | || || ||| | ||||| |||| || || || Sbjct 161544 CATCATGCAGATCTTCGTGAAAACCCTCACGGGTAAAACCATCACCCTCGAGGTAGAGGC 161603 Query 25231 CAACGATACTATCGAGCAAGTAAAACAAAAAATTACCGATAAAGAGGGTATACCGCCCGA 25290 | |||||| |||||| | || || || || || || ||||| || ||||| || Sbjct 161604 CTCCGATACCATCGAGAATGTCAAGGCCAAGATCCAGGACAAGGAGGGAATTCCGCCAGA 161663 Query 25291 TCAGCAAAGACTCATTTACGGCGGCAAACAACTCGAAGATGATAGAAATGTCAGCGATTA 25350 ||| || ||||||| | || |||||||||||| || |||| | | | | |||||| Sbjct 161664 TCAACAGCGACTCATCTTCGCCGGCAAACAACTGGAGGATGGACGCACTCTGTCCGATTA 161723 Query 25351 CAATATTCAAAAAG 25364 ||||| ||||||| Sbjct 161724 TAATATCCAAAAAG 161737 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 445068679107360