Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Trachymyrmex_20zeteki_20[refseq_20GCF_5F001594055.1_202016-03-31] 4,623 sequences; 267,973,152 total letters Query= NC_026440.1 Length=2243109 Score E Sequences producing significant alignments: (Bits) Value seq3918 89.7 7e-12 >seq3918 Length=5396348 Score = 89.7 bits (98), Expect = 7e-12 Identities = 162/232 (70%), Gaps = 10/232 (4%) Strand=Plus/Minus Query 724911 ATCTACAAGGTGCTCAAGCAGGTGCACCCCCGAACCGTTGGGCCATCCTCCAACAAGTCC 724970 ||||||||||| || ||||| || || || || ||| ||| |||| ||| | Sbjct 5258778 ATCTACAAGGTACTGAAGCAAGTACATCCGGACAC---TGGA--ATC-TCCAGCAAAGCT 5258725 Query 724971 ATGTCGATCATGAACTCGTTTGTCAACGACATGATCGACCGCATCGGCACCGAGGCCGGT 725030 ||| ||||||||| ||||||||||| | |||| | |||| | | || || || Sbjct 5258724 ATGAGCATCATGAACAGCTTTGTCAACGATGTATTCGAGAGAATCGCCGCGGAAGC--GT 5258667 Query 725031 CGCC--TGGCGCGCTCCAACAAGCGCAACACGATCGGCACGCGCGAGATCCAGACCGCCG 725088 || |||||| | |||||||||| |||||| | | || |||||||||||||| | Sbjct 5258666 CGAGATTGGCGCATTACAACAAGCGCTCAACGATCACCTCTCGGGAGATCCAGACCGCTG 5258607 Query 725089 TGCGCCTGATCATGCGCGGCGAACTGGCCAGGCACGCCGTCTCCGAGGGCAC 725140 || | || | ||| ||| ||| |||| | |||||| ||| ||| ||||| Sbjct 5258606 TGAGGCTCTTGTTGCCCGGTGAATTGGCGAAGCACGCAGTCAGCGAAGGCAC 5258555 Score = 86.0 bits (94), Expect = 9e-11 Identities = 131/185 (71%), Gaps = 4/185 (2%) Strand=Plus/Plus Query 724958 CTCCAACAAGTCCATGTCGATCATGAACTCGTTTGTCAACGACATGATCGACCGCATCGG 725017 ||||| ||| | ||| ||||||||| ||||||||||| | |||| | |||| Sbjct 5261506 CTCCAGCAAAGCTATGAGCATCATGAACAGCTTTGTCAACGATGTATTCGAGAGAATCGC 5261565 Query 725018 CACCGAGGCCGGTC--GCCTGGCGCGCTCCAACAAGCGCAACACGATCGGCACGCGCGAG 725075 | | || || ||| | |||||| | |||||||||| |||||| | | || ||| Sbjct 5261566 CGCGGAAGC--GTCGAGATTGGCGCATTACAACAAGCGCTCAACGATCACCTCTCGGGAG 5261623 Query 725076 ATCCAGACCGCCGTGCGCCTGATCATGCGCGGCGAACTGGCCAGGCACGCCGTCTCCGAG 725135 ||||||||||| ||| | || | ||| ||| ||| |||| | |||||| ||| ||| Sbjct 5261624 ATCCAGACCGCTGTGAGGCTCTTGTTGCCCGGTGAATTGGCGAAGCACGCAGTCAGCGAA 5261683 Query 725136 GGCAC 725140 ||||| Sbjct 5261684 GGCAC 5261688 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 7177365303152926