Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Trachymyrmex_20zeteki_20[refseq_20GCF_5F001594055.1_202016-03-31] 4,623 sequences; 267,973,152 total letters Query= NC_026922.1 Length=157977 Score E Sequences producing significant alignments: (Bits) Value seq4552 147 2e-30 seq3876 145 8e-30 seq3537 87.8 2e-12 >seq4552 Length=86203 Score = 147 bits (162), Expect = 2e-30 Identities = 175/232 (75%), Gaps = 4/232 (2%) Strand=Plus/Minus Query 134485 TTCCTCCTCTGAGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGC 134544 ||||||||| || |||| || | ||| || |||||||| ||||| |||||||||||| Sbjct 4244 TTCCTCCTCGAAGACGCAGAACCAAGTGAAGTGTGGATTCTTTTTGGATGTTGTAGTCGG 4185 Query 134545 CAACGGTG-TGAGAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGC 134603 || || || | || || || ||||| || || || |||| |||||| ||||| || Sbjct 4184 AAAGAGTTCTGCCA-TCTTCCAGTTGTTTACCGGCGAAGATCAGACGCTGTTGATCCGGT 4126 Query 134604 GGTATGCCTTCTTTTTCTTGAATTTTTTGTTTGACCGCGTCCAATG-TGTCGGACGATTC 134662 || || || ||||| || || ||||| || || | | ||||| |||| || | ||| Sbjct 4125 GGAATTCCCTCTTTGTCCTGGATTTTAGCCTTTAC-GTTTTCAATGGTGTCTGAAGCTTC 4067 Query 134663 CACGTCGAGAGTAATGGTTTTACCGGTTAAAGTTTTAACGAAAATTTGCATT 134714 || ||||| ||||||||||||||||| | |||||| ||||| ||||||||| Sbjct 4066 GACTTCGAGGGTAATGGTTTTACCGGTGAGAGTTTTCACGAAGATTTGCATT 4015 Score = 145 bits (160), Expect = 8e-30 Identities = 170/230 (74%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 134485 TTCCTCCTCTGAGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGC 134544 ||||||||| || |||| || || || || || ||||| || || ||||| ||||| Sbjct 4016 TTCCTCCTCGAAGACGCAGAACCAGATGAAGAGTAGATTCTTTCTGGATGTTATAGTCTG 3957 Query 134545 CAACGGTGTGAGAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCG 134604 | || | ||| || | |||||| || || || |||||||| ||||| || || | Sbjct 3956 AGAGTGTCCTACCGTCTTCCAACTGTTTACCAGCGAAGATCAAACGTTGCTGGTCAGGAG 3897 Query 134605 GTATGCCTTCTTTTTCTTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCA 134664 | ||||||||||| ||||| ||||| ||| || || | |||||| || | ||| | Sbjct 3896 GAATGCCTTCTTTGTCTTGGATTTTAGCTTTTACGTTTTCTATTGTGTCAGAGGCTTCAA 3837 Query 134665 CGTCGAGAGTAATGGTTTTACCGGTTAAAGTTTTAACGAAAATTTGCATT 134714 | || ||||| |||||||||||||| | |||||| ||||| ||||||||| Sbjct 3836 CTTCAAGAGTGATGGTTTTACCGGTGAGAGTTTTCACGAAGATTTGCATT 3787 Score = 136 bits (150), Expect = 4e-27 Identities = 168/230 (73%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 134485 TTCCTCCTCTGAGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGC 134544 ||||||||| || |||| || || || || || ||||| || || ||||| ||||| Sbjct 3788 TTCCTCCTCGAAGACGCAGAACCAGATGAAGAGTAGATTCTTTCTGGATGTTATAGTCTG 3729 Query 134545 CAACGGTGTGAGAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCG 134604 | || | ||| || | |||||| || || || |||||||| ||||| || || | Sbjct 3728 AGAGTGTCCTACCGTCTTCCAACTGTTTACCAGCGAAGATCAAACGTTGCTGGTCAGGAG 3669 Query 134605 GTATGCCTTCTTTTTCTTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCA 134664 | ||||||||||| ||||| || || ||| || || | |||||| || | ||| | Sbjct 3668 GAATGCCTTCTTTGTCTTGGATCTTAGCTTTTACGTTTTCTATTGTGTCAGAGGCTTCAA 3609 Query 134665 CGTCGAGAGTAATGGTTTTACCGGTTAAAGTTTTAACGAAAATTTGCATT 134714 | || || || |||||||||||||| | |||||| ||||| ||||||||| Sbjct 3608 CTTCAAGGGTGATGGTTTTACCGGTGAGAGTTTTCACGAAGATTTGCATT 3559 Score = 132 bits (146), Expect = 5e-26 Identities = 169/230 (73%), Gaps = 2/230 (1%) Strand=Plus/Minus Query 134485 TTCCTCCTCTGAGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTC-G 134543 ||||||||| || |||| || || || || |||||||| |||||||| || || || | Sbjct 3560 TTCCTCCTCGAAGACGCAGAACCAGATGAAGTGTGGATTCTTTTTGAATATTATAATCAG 3501 Query 134544 CCAACGGTGTGAGAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGC 134603 | | | || | || || || |||||||| |||||||||| |||||||||||| || Sbjct 3500 AGAGAGTTCTGCCA-TCTTCAAGTTGTTTGCCAGCAAAAATCAGACGCTGCTGATCCGGG 3442 Query 134604 GGTATGCCTTCTTTTTCTTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCC 134663 || || || ||||| ||||| ||||| ||| || || | ||||| || | ||| Sbjct 3441 GGAATTCCCTCTTTGTCTTGGATTTTGGCTTTCACATTTTCAATAGTGTCTGAAGCTTCG 3382 Query 134664 ACGTCGAGAGTAATGGTTTTACCGGTTAAAGTTTTAACGAAAATTTGCAT 134713 || ||||| || ||||||||||| || | ||| || || || || ||||| Sbjct 3381 ACTTCGAGGGTGATGGTTTTACCCGTAAGAGTCTTCACAAAGATCTGCAT 3332 Score = 131 bits (144), Expect = 2e-25 Identities = 168/229 (73%), Gaps = 2/229 (1%) Strand=Plus/Minus Query 134487 CCTCCTCTGAGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCA 134546 ||||| | ||||| || || | ||| || || ||||| ||||| |||||||| || | Sbjct 4470 CCTCCGCGAAGTCGTAAAACTAAGTGGAGTGTAGATTCTTTTTGGATGTTGTAATCAGAA 4411 Query 134547 ACGGTGTGAGAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGT 134606 | || ||| || || || ||||| || || || |||||||| ||||| || || Sbjct 4410 AGAGTTCTGCCGTCTTCCAGTTGCTTGCCAGCGAAGATTAAACGCTGTTGATCTGGAGGG 4351 Query 134607 ATGCCTTCTTTTTCTTGAATTTTTTGTTTGACCGCGTCCAAT-GTGTCGGACGATTCCAC 134665 || |||||||| || |||||||| || || | | |||| ||||| || | ||| || Sbjct 4350 ATTCCTTCTTTGTCCTGAATTTTGGCCTTCAC-GTTTTCAATAGTGTCTGAAGCTTCGAC 4292 Query 134666 GTCGAGAGTAATGGTTTTACCGGTTAAAGTTTTAACGAAAATTTGCATT 134714 || ||||| ||||||||||| || | |||||| || |||||||||||| Sbjct 4291 TTCAAGAGTGATGGTTTTACCTGTGAGAGTTTTCACAAAAATTTGCATT 4243 >seq3876 Length=890137 Score = 145 bits (160), Expect = 8e-30 Identities = 154/203 (76%), Gaps = 0/203 (0%) Strand=Plus/Plus Query 134511 TGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCAACGGTGTGAGAGTCGTCGAGCTGT 134570 || || |||||||| ||||||||||||||||| || ||| | || || |||||| Sbjct 521086 TGCAGTGTGGATTCTTTTTGAATGTTGTAGTCAGAAAGAGTGCGGCCATCTTCAAGCTGT 521145 Query 134571 TTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGTATGCCTTCTTTTTCTTGAATTTTT 134630 || || || || ||||| | ||||||||| || || || |||||||| |||||||||||| Sbjct 521146 TTTCCGGCGAAGATCAATCTCTGCTGATCTGGAGGGATTCCTTCTTTGTCTTGAATTTTT 521205 Query 134631 TGTTTGACCGCGTCCAATGTGTCGGACGATTCCACGTCGAGAGTAATGGTTTTACCGGTT 134690 |||||| || | ||||| || | || || || | || |||||||| ||||| Sbjct 521206 GCTTTGACATTTTCGATCGTGTCAGATGCCTCGACTTCCAACGTGATGGTTTTTCCGGTC 521265 Query 134691 AAAGTTTTAACGAAAATTTGCAT 134713 || ||||| |||||||||||||| Sbjct 521266 AATGTTTTGACGAAAATTTGCAT 521288 Score = 136 bits (150), Expect = 4e-27 Identities = 152/203 (75%), Gaps = 0/203 (0%) Strand=Plus/Plus Query 134511 TGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCAACGGTGTGAGAGTCGTCGAGCTGT 134570 || || ||||||||||| ||||| |||||||| || ||| | || || |||||| Sbjct 520858 TGCAGTGTGGATTCCTTCTGAATATTGTAGTCAGAAAGTGTGCGGCCATCTTCAAGCTGT 520917 Query 134571 TTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGTATGCCTTCTTTTTCTTGAATTTTT 134630 || || ||||| ||||| | |||||||| || || || |||||||| |||||||||||| Sbjct 520918 TTTCCAGCAAAGATCAATCTTTGCTGATCCGGAGGGATTCCTTCTTTGTCTTGAATTTTT 520977 Query 134631 TGTTTGACCGCGTCCAATGTGTCGGACGATTCCACGTCGAGAGTAATGGTTTTACCGGTT 134690 |||||| || | ||||| || | || || || | || ||||| || ||||| Sbjct 520978 GCTTTGACATTTTCGATCGTGTCAGATGCCTCAACTTCCAACGTGATGGTCTTTCCGGTC 521037 Query 134691 AAAGTTTTAACGAAAATTTGCAT 134713 || ||||| |||||||||||||| Sbjct 521038 AATGTTTTGACGAAAATTTGCAT 521060 Score = 129 bits (142), Expect = 6e-25 Identities = 151/204 (74%), Gaps = 0/204 (0%) Strand=Plus/Plus Query 134511 TGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCAACGGTGTGAGAGTCGTCGAGCTGT 134570 || || || |||||||| |||||||| || || || || | ||| ||||||||| Sbjct 520174 TGCAGGGTAGATTCCTTCTGAATGTTATAATCAGAAAGCGTACGGCCGTCTTCGAGCTGT 520233 Query 134571 TTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGTATGCCTTCTTTTTCTTGAATTTTT 134630 || || ||||| ||||| | ||||||||| || || || ||||| || ||||||||||| Sbjct 520234 TTTCCGGCAAAGATCAACCTCTGCTGATCTGGAGGGATTCCTTCCTTGTCTTGAATTTTG 520293 Query 134631 TGTTTGACCGCGTCCAATGTGTCGGACGATTCCACGTCGAGAGTAATGGTTTTACCGGTT 134690 |||||| || | ||||| |||| || || || | || ||||| || || ||| Sbjct 520294 GCTTTGACATTCTCGATCGTGTCCGACGCCTCAACTTCCAACGTGATGGTCTTTCCTGTT 520353 Query 134691 AAAGTTTTAACGAAAATTTGCATT 134714 || || || ||||||||||||||| Sbjct 520354 AATGTCTTGACGAAAATTTGCATT 520377 Score = 129 bits (142), Expect = 6e-25 Identities = 151/204 (74%), Gaps = 0/204 (0%) Strand=Plus/Plus Query 134511 TGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCAACGGTGTGAGAGTCGTCGAGCTGT 134570 || || |||||||| ||||||||||||||||| || ||| | || || |||||| Sbjct 521314 TGCAGTGTGGATTCTTTTTGAATGTTGTAGTCAGAAAGAGTGCGGCCATCTTCAAGCTGT 521373 Query 134571 TTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGTATGCCTTCTTTTTCTTGAATTTTT 134630 || || || |||||||| | ||||||||| || || || |||||||| |||||||||||| Sbjct 521374 TTTCCGGCGAAAATCAATCTCTGCTGATCTGGAGGGATTCCTTCTTTGTCTTGAATTTTT 521433 Query 134631 TGTTTGACCGCGTCCAATGTGTCGGACGATTCCACGTCGAGAGTAATGGTTTTACCGGTT 134690 |||||| || | ||||| || | || || || | || |||||||| || || Sbjct 521434 GCTTTGACATTTTCGATCGTGTCAGATGCCTCGACTTCCAACGTGATGGTTTTTCCTGTC 521493 Query 134691 AAAGTTTTAACGAAAATTTGCATT 134714 | ||||| || || || |||||| Sbjct 521494 AGGGTTTTGACAAAGATCTGCATT 521517 Score = 127 bits (140), Expect = 2e-24 Identities = 150/203 (74%), Gaps = 0/203 (0%) Strand=Plus/Plus Query 134511 TGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCAACGGTGTGAGAGTCGTCGAGCTGT 134570 || || ||||||||||| ||||| ||||| ||| | ||| | ||| || ||||| Sbjct 521542 TGGAGAGTGGATTCCTTCTGAATATTGTAATCGGATAAGGTACGTCCGTCTTCAAGCTGC 521601 Query 134571 TTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGTATGCCTTCTTTTTCTTGAATTTTT 134630 || || || || |||||||||||||||||||| || || ||||| || ||||| || ||| Sbjct 521602 TTTCCAGCGAAGATCAAACGCTGCTGATCGGGTGGGATACCTTCCTTATCTTGGATCTTT 521661 Query 134631 TGTTTGACCGCGTCCAATGTGTCGGACGATTCCACGTCGAGAGTAATGGTTTTACCGGTT 134690 ||| || || | ||||| || | ||| || || || || ||||| || ||||| Sbjct 521662 GCTTTTACATTCTCGATGGTGTCAGAAGCTTCAACTTCAAGGGTTATGGTCTTCCCGGTC 521721 Query 134691 AAAGTTTTAACGAAAATTTGCAT 134713 || || || |||||||| ||||| Sbjct 521722 AATGTCTTCACGAAAATCTGCAT 521744 Score = 125 bits (138), Expect = 7e-24 Identities = 146/197 (74%), Gaps = 0/197 (0%) Strand=Plus/Plus Query 134517 GTGGATTCCTTTTGAATGTTGTAGTCGCCAACGGTGTGAGAGTCGTCGAGCTGTTTGCCT 134576 || |||||||| |||||||| || || || ||| || ||| || |||||||| || Sbjct 520408 GTCGATTCCTTCTGAATGTTATAATCTGAAAGTGTGCGACCGTCTTCAAGCTGTTTTCCG 520467 Query 134577 GCAAAAATCAAACGCTGCTGATCGGGCGGTATGCCTTCTTTTTCTTGAATTTTTTGTTTG 134636 || || ||||| | |||||| || || || || ||||| || || ||||||||| ||| Sbjct 520468 GCGAAGATCAACCTCTGCTGGTCCGGGGGGATTCCTTCCTTGTCCTGAATTTTTGCTTTC 520527 Query 134637 ACCGCGTCCAATGTGTCGGACGATTCCACGTCGAGAGTAATGGTTTTACCGGTTAAAGTT 134696 || || | ||||| |||| ||| || || ||||| || || |||||||| | ||| Sbjct 520528 ACGTTCTCAATCGTGTCCGACGCTTCGACTTCCAGAGTGATTGTCTTACCGGTGAGCGTT 520587 Query 134697 TTAACGAAAATTTGCAT 134713 || || ||||||||||| Sbjct 520588 TTGACAAAAATTTGCAT 520604 Score = 125 bits (138), Expect = 7e-24 Identities = 146/197 (74%), Gaps = 0/197 (0%) Strand=Plus/Plus Query 134517 GTGGATTCCTTTTGAATGTTGTAGTCGCCAACGGTGTGAGAGTCGTCGAGCTGTTTGCCT 134576 |||||||||||||||||||||||||| || ||| | || || |||||||| || Sbjct 520636 GTGGATTCCTTTTGAATGTTGTAGTCAGAAAGGGTACGGCCATCTTCAAGCTGTTTTCCG 520695 Query 134577 GCAAAAATCAAACGCTGCTGATCGGGCGGTATGCCTTCTTTTTCTTGAATTTTTTGTTTG 134636 || || ||||| | |||||| || || || || ||||| || || ||||||||| ||| Sbjct 520696 GCGAAGATCAACCTCTGCTGGTCCGGAGGGATTCCTTCCTTGTCCTGAATTTTTGCTTTC 520755 Query 134637 ACCGCGTCCAATGTGTCGGACGATTCCACGTCGAGAGTAATGGTTTTACCGGTTAAAGTT 134696 || || | ||||| || | || || || | || ||||| || ||||| || ||| Sbjct 520756 ACGTTCTCAATCGTGTCAGATGCCTCAACTTCCAATGTGATGGTCTTTCCGGTCAATGTT 520815 Query 134697 TTAACGAAAATTTGCAT 134713 || |||||||||||||| Sbjct 520816 TTGACGAAAATTTGCAT 520832 Score = 123 bits (136), Expect = 3e-23 Identities = 149/203 (73%), Gaps = 0/203 (0%) Strand=Plus/Plus Query 134511 TGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCAACGGTGTGAGAGTCGTCGAGCTGT 134570 || || || |||||||| |||||||| || || || || | ||| ||||||||| Sbjct 519946 TGCAGGGTAGATTCCTTCTGAATGTTATAATCAGAAAGCGTACGGCCGTCTTCGAGCTGT 520005 Query 134571 TTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGTATGCCTTCTTTTTCTTGAATTTTT 134630 || || ||||| ||||| | |||||||||||| || ||||||||||| ||||||||||| Sbjct 520006 TTTCCGGCAAAGATCAACCTCTGCTGATCGGGAGGAATGCCTTCTTTATCTTGAATTTTC 520065 Query 134631 TGTTTGACCGCGTCCAATGTGTCGGACGATTCCACGTCGAGAGTAATGGTTTTACCGGTT 134690 || || || | ||||| || | || || || || || || |||||||| || Sbjct 520066 GCCTTCACGTTTTCGATCGTGTCCGAAGCCTCAACCTCCAGTGTGATAGTTTTACCAGTG 520125 Query 134691 AAAGTTTTAACGAAAATTTGCAT 134713 | ||| || || ||||| ||||| Sbjct 520126 AGAGTCTTGACAAAAATCTGCAT 520148 Score = 109 bits (120), Expect = 6e-19 Identities = 161/228 (71%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 134486 TCCTCCTCTGAGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCC 134545 ||| ||||| ||||| | || ||||| || || || || || ||||| || |||||| Sbjct 519693 TCCGCCTCTAAGTCGAAGTACAAGGTGAAGTGTAGACTCTTTCTGAATATTATAGTCGGA 519752 Query 134546 AACGGTGTGAGAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGG 134605 | || | || || ||||| ||||| || ||||||| | || |||||||| || Sbjct 519753 TAAAGTCCGTCCATCCTCTAGCTGCTTGCCCGCGAAAATCAGTCTTTGTTGATCGGGAGG 519812 Query 134606 TATGCCTTCTTTTTCTTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCAC 134665 ||||||||||| || |||||||| ||| || || | ||||| || | || || Sbjct 519813 AATGCCTTCTTTATCCTGAATTTTCGCTTTCACGTTTTCGATCGTGTCCGAAGCCTCAAC 519872 Query 134666 GTCGAGAGTAATGGTTTTACCGGTTAAAGTTTTAACGAAAATTTGCAT 134713 || || || || |||||||| || | ||| || || ||||| ||||| Sbjct 519873 CTCCAGTGTGATAGTTTTACCAGTGAGAGTCTTGACAAAAATCTGCAT 519920 >seq3537 Length=3457499 Score = 87.8 bits (96), Expect = 2e-12 Identities = 93/123 (76%), Gaps = 0/123 (0%) Strand=Plus/Minus Query 21529 AATTCCACGCACAAACGATCCGCCACGAATTCAATGTATTGACACATGCTGTCGCAATTC 21588 ||| | ||| | || | ||||| |||||||| ||||||| |||||| | ||||||||| Sbjct 3065555 AATGCAACGAATAATCTGTCCGCGACGAATTCGATGTATTTACACATCCATTCGCAATTC 3065496 Query 21589 ATGCCCAACAGATCGACCGGTAGCGCTTCGGTGAAAAACTCCTTCTCGATAGCCACCGCT 21648 || || | ||| || ||||||| ||||| || ||||| ||||| || || | || || Sbjct 3065495 ATTCCTATCAGTTCAACCGGTAACGCTTGCGTCAAAAATTCCTTTTCAATTTCTACGGCA 3065436 Query 21649 TCC 21651 ||| Sbjct 3065435 TCC 3065433 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 505369194289960