Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Trachymyrmex_20zeteki_20[refseq_20GCF_5F001594055.1_202016-03-31]
4,623 sequences; 267,973,152 total letters
Query= NC_026922.1
Length=157977
Score E
Sequences producing significant alignments: (Bits) Value
seq4552 147 2e-30
seq3876 145 8e-30
seq3537 87.8 2e-12
>seq4552
Length=86203
Score = 147 bits (162), Expect = 2e-30
Identities = 175/232 (75%), Gaps = 4/232 (2%)
Strand=Plus/Minus
Query 134485 TTCCTCCTCTGAGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGC 134544
||||||||| || |||| || | ||| || |||||||| ||||| ||||||||||||
Sbjct 4244 TTCCTCCTCGAAGACGCAGAACCAAGTGAAGTGTGGATTCTTTTTGGATGTTGTAGTCGG 4185
Query 134545 CAACGGTG-TGAGAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGC 134603
|| || || | || || || ||||| || || || |||| |||||| ||||| ||
Sbjct 4184 AAAGAGTTCTGCCA-TCTTCCAGTTGTTTACCGGCGAAGATCAGACGCTGTTGATCCGGT 4126
Query 134604 GGTATGCCTTCTTTTTCTTGAATTTTTTGTTTGACCGCGTCCAATG-TGTCGGACGATTC 134662
|| || || ||||| || || ||||| || || | | ||||| |||| || | |||
Sbjct 4125 GGAATTCCCTCTTTGTCCTGGATTTTAGCCTTTAC-GTTTTCAATGGTGTCTGAAGCTTC 4067
Query 134663 CACGTCGAGAGTAATGGTTTTACCGGTTAAAGTTTTAACGAAAATTTGCATT 134714
|| ||||| ||||||||||||||||| | |||||| ||||| |||||||||
Sbjct 4066 GACTTCGAGGGTAATGGTTTTACCGGTGAGAGTTTTCACGAAGATTTGCATT 4015
Score = 145 bits (160), Expect = 8e-30
Identities = 170/230 (74%), Gaps = 0/230 (0%)
Strand=Plus/Minus
Query 134485 TTCCTCCTCTGAGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGC 134544
||||||||| || |||| || || || || || ||||| || || ||||| |||||
Sbjct 4016 TTCCTCCTCGAAGACGCAGAACCAGATGAAGAGTAGATTCTTTCTGGATGTTATAGTCTG 3957
Query 134545 CAACGGTGTGAGAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCG 134604
| || | ||| || | |||||| || || || |||||||| ||||| || || |
Sbjct 3956 AGAGTGTCCTACCGTCTTCCAACTGTTTACCAGCGAAGATCAAACGTTGCTGGTCAGGAG 3897
Query 134605 GTATGCCTTCTTTTTCTTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCA 134664
| ||||||||||| ||||| ||||| ||| || || | |||||| || | ||| |
Sbjct 3896 GAATGCCTTCTTTGTCTTGGATTTTAGCTTTTACGTTTTCTATTGTGTCAGAGGCTTCAA 3837
Query 134665 CGTCGAGAGTAATGGTTTTACCGGTTAAAGTTTTAACGAAAATTTGCATT 134714
| || ||||| |||||||||||||| | |||||| ||||| |||||||||
Sbjct 3836 CTTCAAGAGTGATGGTTTTACCGGTGAGAGTTTTCACGAAGATTTGCATT 3787
Score = 136 bits (150), Expect = 4e-27
Identities = 168/230 (73%), Gaps = 0/230 (0%)
Strand=Plus/Minus
Query 134485 TTCCTCCTCTGAGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGC 134544
||||||||| || |||| || || || || || ||||| || || ||||| |||||
Sbjct 3788 TTCCTCCTCGAAGACGCAGAACCAGATGAAGAGTAGATTCTTTCTGGATGTTATAGTCTG 3729
Query 134545 CAACGGTGTGAGAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCG 134604
| || | ||| || | |||||| || || || |||||||| ||||| || || |
Sbjct 3728 AGAGTGTCCTACCGTCTTCCAACTGTTTACCAGCGAAGATCAAACGTTGCTGGTCAGGAG 3669
Query 134605 GTATGCCTTCTTTTTCTTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCA 134664
| ||||||||||| ||||| || || ||| || || | |||||| || | ||| |
Sbjct 3668 GAATGCCTTCTTTGTCTTGGATCTTAGCTTTTACGTTTTCTATTGTGTCAGAGGCTTCAA 3609
Query 134665 CGTCGAGAGTAATGGTTTTACCGGTTAAAGTTTTAACGAAAATTTGCATT 134714
| || || || |||||||||||||| | |||||| ||||| |||||||||
Sbjct 3608 CTTCAAGGGTGATGGTTTTACCGGTGAGAGTTTTCACGAAGATTTGCATT 3559
Score = 132 bits (146), Expect = 5e-26
Identities = 169/230 (73%), Gaps = 2/230 (1%)
Strand=Plus/Minus
Query 134485 TTCCTCCTCTGAGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTC-G 134543
||||||||| || |||| || || || || |||||||| |||||||| || || || |
Sbjct 3560 TTCCTCCTCGAAGACGCAGAACCAGATGAAGTGTGGATTCTTTTTGAATATTATAATCAG 3501
Query 134544 CCAACGGTGTGAGAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGC 134603
| | | || | || || || |||||||| |||||||||| |||||||||||| ||
Sbjct 3500 AGAGAGTTCTGCCA-TCTTCAAGTTGTTTGCCAGCAAAAATCAGACGCTGCTGATCCGGG 3442
Query 134604 GGTATGCCTTCTTTTTCTTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCC 134663
|| || || ||||| ||||| ||||| ||| || || | ||||| || | |||
Sbjct 3441 GGAATTCCCTCTTTGTCTTGGATTTTGGCTTTCACATTTTCAATAGTGTCTGAAGCTTCG 3382
Query 134664 ACGTCGAGAGTAATGGTTTTACCGGTTAAAGTTTTAACGAAAATTTGCAT 134713
|| ||||| || ||||||||||| || | ||| || || || || |||||
Sbjct 3381 ACTTCGAGGGTGATGGTTTTACCCGTAAGAGTCTTCACAAAGATCTGCAT 3332
Score = 131 bits (144), Expect = 2e-25
Identities = 168/229 (73%), Gaps = 2/229 (1%)
Strand=Plus/Minus
Query 134487 CCTCCTCTGAGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCA 134546
||||| | ||||| || || | ||| || || ||||| ||||| |||||||| || |
Sbjct 4470 CCTCCGCGAAGTCGTAAAACTAAGTGGAGTGTAGATTCTTTTTGGATGTTGTAATCAGAA 4411
Query 134547 ACGGTGTGAGAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGT 134606
| || ||| || || || ||||| || || || |||||||| ||||| || ||
Sbjct 4410 AGAGTTCTGCCGTCTTCCAGTTGCTTGCCAGCGAAGATTAAACGCTGTTGATCTGGAGGG 4351
Query 134607 ATGCCTTCTTTTTCTTGAATTTTTTGTTTGACCGCGTCCAAT-GTGTCGGACGATTCCAC 134665
|| |||||||| || |||||||| || || | | |||| ||||| || | ||| ||
Sbjct 4350 ATTCCTTCTTTGTCCTGAATTTTGGCCTTCAC-GTTTTCAATAGTGTCTGAAGCTTCGAC 4292
Query 134666 GTCGAGAGTAATGGTTTTACCGGTTAAAGTTTTAACGAAAATTTGCATT 134714
|| ||||| ||||||||||| || | |||||| || ||||||||||||
Sbjct 4291 TTCAAGAGTGATGGTTTTACCTGTGAGAGTTTTCACAAAAATTTGCATT 4243
>seq3876
Length=890137
Score = 145 bits (160), Expect = 8e-30
Identities = 154/203 (76%), Gaps = 0/203 (0%)
Strand=Plus/Plus
Query 134511 TGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCAACGGTGTGAGAGTCGTCGAGCTGT 134570
|| || |||||||| ||||||||||||||||| || ||| | || || ||||||
Sbjct 521086 TGCAGTGTGGATTCTTTTTGAATGTTGTAGTCAGAAAGAGTGCGGCCATCTTCAAGCTGT 521145
Query 134571 TTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGTATGCCTTCTTTTTCTTGAATTTTT 134630
|| || || || ||||| | ||||||||| || || || |||||||| ||||||||||||
Sbjct 521146 TTTCCGGCGAAGATCAATCTCTGCTGATCTGGAGGGATTCCTTCTTTGTCTTGAATTTTT 521205
Query 134631 TGTTTGACCGCGTCCAATGTGTCGGACGATTCCACGTCGAGAGTAATGGTTTTACCGGTT 134690
|||||| || | ||||| || | || || || | || |||||||| |||||
Sbjct 521206 GCTTTGACATTTTCGATCGTGTCAGATGCCTCGACTTCCAACGTGATGGTTTTTCCGGTC 521265
Query 134691 AAAGTTTTAACGAAAATTTGCAT 134713
|| ||||| ||||||||||||||
Sbjct 521266 AATGTTTTGACGAAAATTTGCAT 521288
Score = 136 bits (150), Expect = 4e-27
Identities = 152/203 (75%), Gaps = 0/203 (0%)
Strand=Plus/Plus
Query 134511 TGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCAACGGTGTGAGAGTCGTCGAGCTGT 134570
|| || ||||||||||| ||||| |||||||| || ||| | || || ||||||
Sbjct 520858 TGCAGTGTGGATTCCTTCTGAATATTGTAGTCAGAAAGTGTGCGGCCATCTTCAAGCTGT 520917
Query 134571 TTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGTATGCCTTCTTTTTCTTGAATTTTT 134630
|| || ||||| ||||| | |||||||| || || || |||||||| ||||||||||||
Sbjct 520918 TTTCCAGCAAAGATCAATCTTTGCTGATCCGGAGGGATTCCTTCTTTGTCTTGAATTTTT 520977
Query 134631 TGTTTGACCGCGTCCAATGTGTCGGACGATTCCACGTCGAGAGTAATGGTTTTACCGGTT 134690
|||||| || | ||||| || | || || || | || ||||| || |||||
Sbjct 520978 GCTTTGACATTTTCGATCGTGTCAGATGCCTCAACTTCCAACGTGATGGTCTTTCCGGTC 521037
Query 134691 AAAGTTTTAACGAAAATTTGCAT 134713
|| ||||| ||||||||||||||
Sbjct 521038 AATGTTTTGACGAAAATTTGCAT 521060
Score = 129 bits (142), Expect = 6e-25
Identities = 151/204 (74%), Gaps = 0/204 (0%)
Strand=Plus/Plus
Query 134511 TGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCAACGGTGTGAGAGTCGTCGAGCTGT 134570
|| || || |||||||| |||||||| || || || || | ||| |||||||||
Sbjct 520174 TGCAGGGTAGATTCCTTCTGAATGTTATAATCAGAAAGCGTACGGCCGTCTTCGAGCTGT 520233
Query 134571 TTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGTATGCCTTCTTTTTCTTGAATTTTT 134630
|| || ||||| ||||| | ||||||||| || || || ||||| || |||||||||||
Sbjct 520234 TTTCCGGCAAAGATCAACCTCTGCTGATCTGGAGGGATTCCTTCCTTGTCTTGAATTTTG 520293
Query 134631 TGTTTGACCGCGTCCAATGTGTCGGACGATTCCACGTCGAGAGTAATGGTTTTACCGGTT 134690
|||||| || | ||||| |||| || || || | || ||||| || || |||
Sbjct 520294 GCTTTGACATTCTCGATCGTGTCCGACGCCTCAACTTCCAACGTGATGGTCTTTCCTGTT 520353
Query 134691 AAAGTTTTAACGAAAATTTGCATT 134714
|| || || |||||||||||||||
Sbjct 520354 AATGTCTTGACGAAAATTTGCATT 520377
Score = 129 bits (142), Expect = 6e-25
Identities = 151/204 (74%), Gaps = 0/204 (0%)
Strand=Plus/Plus
Query 134511 TGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCAACGGTGTGAGAGTCGTCGAGCTGT 134570
|| || |||||||| ||||||||||||||||| || ||| | || || ||||||
Sbjct 521314 TGCAGTGTGGATTCTTTTTGAATGTTGTAGTCAGAAAGAGTGCGGCCATCTTCAAGCTGT 521373
Query 134571 TTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGTATGCCTTCTTTTTCTTGAATTTTT 134630
|| || || |||||||| | ||||||||| || || || |||||||| ||||||||||||
Sbjct 521374 TTTCCGGCGAAAATCAATCTCTGCTGATCTGGAGGGATTCCTTCTTTGTCTTGAATTTTT 521433
Query 134631 TGTTTGACCGCGTCCAATGTGTCGGACGATTCCACGTCGAGAGTAATGGTTTTACCGGTT 134690
|||||| || | ||||| || | || || || | || |||||||| || ||
Sbjct 521434 GCTTTGACATTTTCGATCGTGTCAGATGCCTCGACTTCCAACGTGATGGTTTTTCCTGTC 521493
Query 134691 AAAGTTTTAACGAAAATTTGCATT 134714
| ||||| || || || ||||||
Sbjct 521494 AGGGTTTTGACAAAGATCTGCATT 521517
Score = 127 bits (140), Expect = 2e-24
Identities = 150/203 (74%), Gaps = 0/203 (0%)
Strand=Plus/Plus
Query 134511 TGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCAACGGTGTGAGAGTCGTCGAGCTGT 134570
|| || ||||||||||| ||||| ||||| ||| | ||| | ||| || |||||
Sbjct 521542 TGGAGAGTGGATTCCTTCTGAATATTGTAATCGGATAAGGTACGTCCGTCTTCAAGCTGC 521601
Query 134571 TTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGTATGCCTTCTTTTTCTTGAATTTTT 134630
|| || || || |||||||||||||||||||| || || ||||| || ||||| || |||
Sbjct 521602 TTTCCAGCGAAGATCAAACGCTGCTGATCGGGTGGGATACCTTCCTTATCTTGGATCTTT 521661
Query 134631 TGTTTGACCGCGTCCAATGTGTCGGACGATTCCACGTCGAGAGTAATGGTTTTACCGGTT 134690
||| || || | ||||| || | ||| || || || || ||||| || |||||
Sbjct 521662 GCTTTTACATTCTCGATGGTGTCAGAAGCTTCAACTTCAAGGGTTATGGTCTTCCCGGTC 521721
Query 134691 AAAGTTTTAACGAAAATTTGCAT 134713
|| || || |||||||| |||||
Sbjct 521722 AATGTCTTCACGAAAATCTGCAT 521744
Score = 125 bits (138), Expect = 7e-24
Identities = 146/197 (74%), Gaps = 0/197 (0%)
Strand=Plus/Plus
Query 134517 GTGGATTCCTTTTGAATGTTGTAGTCGCCAACGGTGTGAGAGTCGTCGAGCTGTTTGCCT 134576
|| |||||||| |||||||| || || || ||| || ||| || |||||||| ||
Sbjct 520408 GTCGATTCCTTCTGAATGTTATAATCTGAAAGTGTGCGACCGTCTTCAAGCTGTTTTCCG 520467
Query 134577 GCAAAAATCAAACGCTGCTGATCGGGCGGTATGCCTTCTTTTTCTTGAATTTTTTGTTTG 134636
|| || ||||| | |||||| || || || || ||||| || || ||||||||| |||
Sbjct 520468 GCGAAGATCAACCTCTGCTGGTCCGGGGGGATTCCTTCCTTGTCCTGAATTTTTGCTTTC 520527
Query 134637 ACCGCGTCCAATGTGTCGGACGATTCCACGTCGAGAGTAATGGTTTTACCGGTTAAAGTT 134696
|| || | ||||| |||| ||| || || ||||| || || |||||||| | |||
Sbjct 520528 ACGTTCTCAATCGTGTCCGACGCTTCGACTTCCAGAGTGATTGTCTTACCGGTGAGCGTT 520587
Query 134697 TTAACGAAAATTTGCAT 134713
|| || |||||||||||
Sbjct 520588 TTGACAAAAATTTGCAT 520604
Score = 125 bits (138), Expect = 7e-24
Identities = 146/197 (74%), Gaps = 0/197 (0%)
Strand=Plus/Plus
Query 134517 GTGGATTCCTTTTGAATGTTGTAGTCGCCAACGGTGTGAGAGTCGTCGAGCTGTTTGCCT 134576
|||||||||||||||||||||||||| || ||| | || || |||||||| ||
Sbjct 520636 GTGGATTCCTTTTGAATGTTGTAGTCAGAAAGGGTACGGCCATCTTCAAGCTGTTTTCCG 520695
Query 134577 GCAAAAATCAAACGCTGCTGATCGGGCGGTATGCCTTCTTTTTCTTGAATTTTTTGTTTG 134636
|| || ||||| | |||||| || || || || ||||| || || ||||||||| |||
Sbjct 520696 GCGAAGATCAACCTCTGCTGGTCCGGAGGGATTCCTTCCTTGTCCTGAATTTTTGCTTTC 520755
Query 134637 ACCGCGTCCAATGTGTCGGACGATTCCACGTCGAGAGTAATGGTTTTACCGGTTAAAGTT 134696
|| || | ||||| || | || || || | || ||||| || ||||| || |||
Sbjct 520756 ACGTTCTCAATCGTGTCAGATGCCTCAACTTCCAATGTGATGGTCTTTCCGGTCAATGTT 520815
Query 134697 TTAACGAAAATTTGCAT 134713
|| ||||||||||||||
Sbjct 520816 TTGACGAAAATTTGCAT 520832
Score = 123 bits (136), Expect = 3e-23
Identities = 149/203 (73%), Gaps = 0/203 (0%)
Strand=Plus/Plus
Query 134511 TGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCAACGGTGTGAGAGTCGTCGAGCTGT 134570
|| || || |||||||| |||||||| || || || || | ||| |||||||||
Sbjct 519946 TGCAGGGTAGATTCCTTCTGAATGTTATAATCAGAAAGCGTACGGCCGTCTTCGAGCTGT 520005
Query 134571 TTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGTATGCCTTCTTTTTCTTGAATTTTT 134630
|| || ||||| ||||| | |||||||||||| || ||||||||||| |||||||||||
Sbjct 520006 TTTCCGGCAAAGATCAACCTCTGCTGATCGGGAGGAATGCCTTCTTTATCTTGAATTTTC 520065
Query 134631 TGTTTGACCGCGTCCAATGTGTCGGACGATTCCACGTCGAGAGTAATGGTTTTACCGGTT 134690
|| || || | ||||| || | || || || || || || |||||||| ||
Sbjct 520066 GCCTTCACGTTTTCGATCGTGTCCGAAGCCTCAACCTCCAGTGTGATAGTTTTACCAGTG 520125
Query 134691 AAAGTTTTAACGAAAATTTGCAT 134713
| ||| || || ||||| |||||
Sbjct 520126 AGAGTCTTGACAAAAATCTGCAT 520148
Score = 109 bits (120), Expect = 6e-19
Identities = 161/228 (71%), Gaps = 0/228 (0%)
Strand=Plus/Plus
Query 134486 TCCTCCTCTGAGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCC 134545
||| ||||| ||||| | || ||||| || || || || || ||||| || ||||||
Sbjct 519693 TCCGCCTCTAAGTCGAAGTACAAGGTGAAGTGTAGACTCTTTCTGAATATTATAGTCGGA 519752
Query 134546 AACGGTGTGAGAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGG 134605
| || | || || ||||| ||||| || ||||||| | || |||||||| ||
Sbjct 519753 TAAAGTCCGTCCATCCTCTAGCTGCTTGCCCGCGAAAATCAGTCTTTGTTGATCGGGAGG 519812
Query 134606 TATGCCTTCTTTTTCTTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCAC 134665
||||||||||| || |||||||| ||| || || | ||||| || | || ||
Sbjct 519813 AATGCCTTCTTTATCCTGAATTTTCGCTTTCACGTTTTCGATCGTGTCCGAAGCCTCAAC 519872
Query 134666 GTCGAGAGTAATGGTTTTACCGGTTAAAGTTTTAACGAAAATTTGCAT 134713
|| || || || |||||||| || | ||| || || ||||| |||||
Sbjct 519873 CTCCAGTGTGATAGTTTTACCAGTGAGAGTCTTGACAAAAATCTGCAT 519920
>seq3537
Length=3457499
Score = 87.8 bits (96), Expect = 2e-12
Identities = 93/123 (76%), Gaps = 0/123 (0%)
Strand=Plus/Minus
Query 21529 AATTCCACGCACAAACGATCCGCCACGAATTCAATGTATTGACACATGCTGTCGCAATTC 21588
||| | ||| | || | ||||| |||||||| ||||||| |||||| | |||||||||
Sbjct 3065555 AATGCAACGAATAATCTGTCCGCGACGAATTCGATGTATTTACACATCCATTCGCAATTC 3065496
Query 21589 ATGCCCAACAGATCGACCGGTAGCGCTTCGGTGAAAAACTCCTTCTCGATAGCCACCGCT 21648
|| || | ||| || ||||||| ||||| || ||||| ||||| || || | || ||
Sbjct 3065495 ATTCCTATCAGTTCAACCGGTAACGCTTGCGTCAAAAATTCCTTTTCAATTTCTACGGCA 3065436
Query 21649 TCC 21651
|||
Sbjct 3065435 TCC 3065433
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 505369194289960
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