Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Trachymyrmex_20zeteki_20[refseq_20GCF_5F001594055.1_202016-03-31]
4,623 sequences; 267,973,152 total letters
Query= NC_027778.1
Length=124244
Score E
Sequences producing significant alignments: (Bits) Value
seq3537 96.9 3e-15
seq3174 89.7 4e-13
seq3506 84.2 2e-11
>seq3537
Length=3457499
Score = 96.9 bits (106), Expect = 3e-15
Identities = 118/161 (73%), Gaps = 0/161 (0%)
Strand=Plus/Plus
Query 43829 GAAAAACATTTTATATCTTTGGTTTTGGCGTTTTTTGCTGCGAGCGACGGGATAGTCAAT 43888
|| ||| | ||||| ||| || || || || ||||| || || || || || |||
Sbjct 3064001 GAGAAATACTTTATCTCTCATGTCTTAGCATTCTTTGCCGCTTCTGATGGTATCGTTAAT 3064060
Query 43889 GAAAATTTGGTTAGTCGGTTTGCGCAAGAAGTTCAATTACCAGAAGCACGATGTTTTTAT 43948
|||||| || || | || || || || || | || |||||||| ||||| |||
Sbjct 3064061 GAAAATCTGATTGAGAGATTCAGTCAGGAGGTGAAAATTCCCGAAGCACGTTGTTTCTAT 3064120
Query 43949 GGGTTTCAAATTGCCATAGAAAATATTCATTCGGAAATGTA 43989
|| ||||||||||||||||||||||||||||| || |||||
Sbjct 3064121 GGCTTTCAAATTGCCATAGAAAATATTCATTCTGAGATGTA 3064161
>seq3174
Length=2070283
Score = 89.7 bits (98), Expect = 4e-13
Identities = 145/204 (71%), Gaps = 10/204 (5%)
Strand=Plus/Plus
Query 41005 GACGTATAATATTGTGCGCGTGGAACCCAACGGACGTACATTT----GATGGCATTGCCA 41060
||||||| ||| ||| || ||||| || || | | |||| ||||||||||||
Sbjct 328915 GACGTATTATAATGTCAGCCTGGAATCC---GGTTG-ATATTTCAAAGATGGCATTGCCG 328970
Query 41061 CCTTGTCATTTGTTATGT-CAGTTTTACGTTTGCAATGGTGAACTGTCATGTCAATTGTA 41119
|| |||||| | || ||| || ||||| || || || ||| |||| || | ||
Sbjct 328971 CCGTGTCATGT-TTTTGTACAATTTTATGTAAATAACGGAGAATTGTCCACGCAGCTTTA 329029
Query 41120 TCAAAGATCAGGTGACATGGGACTAGGGGTCCCGTTTAACATAGCGAGTTATGCTCTGCT 41179
||||||| | |||||||| |||| || ||||||||||||||| ||| || ||||
Sbjct 329030 TCAAAGAAGCGCAGACATGGGTTTAGGAGTGCCGTTTAACATAGCGTCGTATTCTTTGCT 329089
Query 41180 CACGTATATGATTGCACACGTTAC 41203
|| || ||||| || || |||||
Sbjct 329090 GACTTACATGATCGCTCATGTTAC 329113
>seq3506
Length=651687
Score = 84.2 bits (92), Expect = 2e-11
Identities = 105/144 (73%), Gaps = 0/144 (0%)
Strand=Plus/Minus
Query 19612 GGAGTACATGACACTGTTGTCAATCAACTCCTGTCAAAATTAGACGGTGTTAACCAACTG 19671
|| || ||||| || || || ||||| || || ||||| | || ||||| | ||| ||
Sbjct 176869 GGGGTTCATGATACAGTGGTTAATCAGCTTCTTGCAAAAATTGATGGTGTCGAACAATTG 176810
Query 19672 AATAATATTTTAGTTATTGGCATGACTAATAGACTGGAATTAATAGACAGCGCCTTATTA 19731
||||| ||| | |||||||| |||||||||||| || | || ||| || ||||||
Sbjct 176809 AATAACATTCTTGTTATTGGTATGACTAATAGAAGAGATATGATCGACGAAGCTTTATTA 176750
Query 19732 CGACCCGGTCGGTTGGAAATAAAG 19755
|||| || | ||||| |||||
Sbjct 176749 AGACCTGGCAGATTGGAGGTAAAG 176726
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 397433606211115
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |