Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Trachymyrmex_20zeteki_20[refseq_20GCF_5F001594055.1_202016-03-31]
4,623 sequences; 267,973,152 total letters
Query= NC_027923.1
Length=132831
Score E
Sequences producing significant alignments: (Bits) Value
seq4552 138 1e-27
seq4212 118 9e-22
seq3876 107 2e-18
seq4069 100 2e-16
>seq4552
Length=86203
Score = 138 bits (152), Expect = 1e-27
Identities = 169/228 (74%), Gaps = 2/228 (1%)
Strand=Plus/Minus
Query 27021 CCTCCGCGCAACCGCAATACCAAATGTAACGTAGAGTCTTTTTGAATATTGTAGTCGCTC 27080
||||| || | |||| ||||| || | || || |||||||| || |||||||||
Sbjct 4242 CCTCCTCGAAGACGCAGAACCAAGTGAAGTGTGGATTCTTTTTGGATGTTGTAGTCGGAA 4183
Query 27081 AT-GTTGCGCTCGTCTTCGAGCTGTTTACCGGCGTAAATGAGACGCTGTTGATCCGGCGG 27139
| ||| || | ||||| || |||||||||||| | || ||||||||||||||||| ||
Sbjct 4182 AGAGTTCTGC-CATCTTCCAGTTGTTTACCGGCGAAGATCAGACGCTGTTGATCCGGTGG 4124
Query 27140 CACACCCTCTTTATCGGCGATCTTGTTTTTCAGGGTTTCTACAGTGTCTGTGGCTTCAAC 27199
| |||||||| || ||| || || | | |||| | ||||||| ||||| ||
Sbjct 4123 AATTCCCTCTTTGTCCTGGATTTTAGCCTTTACGTTTTCAATGGTGTCTGAAGCTTCGAC 4064
Query 27200 TTCTAGAGTTATAGATTTGCCCGTCAGAGTTTTCACAAAGATTTGCAT 27247
||| || || || | ||| || || ||||||||||| |||||||||||
Sbjct 4063 TTCGAGGGTAATGGTTTTACCGGTGAGAGTTTTCACGAAGATTTGCAT 4016
Score = 134 bits (148), Expect = 1e-26
Identities = 168/228 (74%), Gaps = 2/228 (1%)
Strand=Plus/Minus
Query 27021 CCTCCGCGCAACCGCAATACCAAATGTAACGTAGAGTCTTTTTGAATATTGTAGTCGCTC 27080
||||| || | |||| |||| ||| | || || |||||||||||||| || ||
Sbjct 3558 CCTCCTCGAAGACGCAGAACCAGATGAAGTGTGGATTCTTTTTGAATATTATAATCAGAG 3499
Query 27081 AT-GTTGCGCTCGTCTTCGAGCTGTTTACCGGCGTAAATGAGACGCTGTTGATCCGGCGG 27139
| ||| || | ||||| || ||||| || || |||| |||||||| |||||||| ||
Sbjct 3498 AGAGTTCTGC-CATCTTCAAGTTGTTTGCCAGCAAAAATCAGACGCTGCTGATCCGGGGG 3440
Query 27140 CACACCCTCTTTATCGGCGATCTTGTTTTTCAGGGTTTCTACAGTGTCTGTGGCTTCAAC 27199
| |||||||| || ||| ||| ||||| |||| | |||||||| ||||| ||
Sbjct 3439 AATTCCCTCTTTGTCTTGGATTTTGGCTTTCACATTTTCAATAGTGTCTGAAGCTTCGAC 3380
Query 27200 TTCTAGAGTTATAGATTTGCCCGTCAGAGTTTTCACAAAGATTTGCAT 27247
||| || || || | ||| ||||| ||||| ||||||||||| |||||
Sbjct 3379 TTCGAGGGTGATGGTTTTACCCGTAAGAGTCTTCACAAAGATCTGCAT 3332
Score = 125 bits (138), Expect = 6e-24
Identities = 166/228 (73%), Gaps = 2/228 (1%)
Strand=Plus/Minus
Query 27021 CCTCCGCGCAACCGCAATACCAAATGTAACGTAGAGTCTTTTTGAATATTGTAGTCGCTC 27080
|||||||| | || || || || || | ||||| |||||||| || ||||| ||
Sbjct 4470 CCTCCGCGAAGTCGTAAAACTAAGTGGAGTGTAGATTCTTTTTGGATGTTGTAATCAGAA 4411
Query 27081 AT-GTTGCGCTCGTCTTCGAGCTGTTTACCGGCGTAAATGAGACGCTGTTGATCCGGCGG 27139
| ||| || ||||||| || || || || ||| | || | |||||||||||| || ||
Sbjct 4410 AGAGTTCTGC-CGTCTTCCAGTTGCTTGCCAGCGAAGATTAAACGCTGTTGATCTGGAGG 4352
Query 27140 CACACCCTCTTTATCGGCGATCTTGTTTTTCAGGGTTTCTACAGTGTCTGTGGCTTCAAC 27199
| || ||||| || || ||| |||| | |||| | |||||||| ||||| ||
Sbjct 4351 GATTCCTTCTTTGTCCTGAATTTTGGCCTTCACGTTTTCAATAGTGTCTGAAGCTTCGAC 4292
Query 27200 TTCTAGAGTTATAGATTTGCCCGTCAGAGTTTTCACAAAGATTTGCAT 27247
||| ||||| || | ||| || || |||||||||||||| ||||||||
Sbjct 4291 TTCAAGAGTGATGGTTTTACCTGTGAGAGTTTTCACAAAAATTTGCAT 4244
Score = 120 bits (132), Expect = 3e-22
Identities = 165/229 (72%), Gaps = 4/229 (2%)
Strand=Plus/Minus
Query 27021 CCTCCGCGCAACCGCAATACCAAATGTAACGTAGAGTCTTTTTGAATATTGTAGTCGCTC 27080
||||| || | |||| |||| ||| | ||||| ||||| || || || ||||| |
Sbjct 3786 CCTCCTCGAAGACGCAGAACCAGATGAAGAGTAGATTCTTTCTGGATGTTATAGTC--TG 3729
Query 27081 ATGTTGCGCT--CGTCTTCGAGCTGTTTACCGGCGTAAATGAGACGCTGTTGATCCGGCG 27138
| || || ||||||| | ||||||||| ||| | || | ||| || || || || |
Sbjct 3728 AGAGTGTCCTACCGTCTTCCAACTGTTTACCAGCGAAGATCAAACGTTGCTGGTCAGGAG 3669
Query 27139 GCACACCCTCTTTATCGGCGATCTTGTTTTTCAGGGTTTCTACAGTGTCTGTGGCTTCAA 27198
| | || ||||| || |||||| ||| | | |||||| ||||| | ||||||||
Sbjct 3668 GAATGCCTTCTTTGTCTTGGATCTTAGCTTTTACGTTTTCTATTGTGTCAGAGGCTTCAA 3609
Query 27199 CTTCTAGAGTTATAGATTTGCCCGTCAGAGTTTTCACAAAGATTTGCAT 27247
|||| || || || | ||| || || ||||||||||| |||||||||||
Sbjct 3608 CTTCAAGGGTGATGGTTTTACCGGTGAGAGTTTTCACGAAGATTTGCAT 3560
Score = 120 bits (132), Expect = 3e-22
Identities = 165/229 (72%), Gaps = 4/229 (2%)
Strand=Plus/Minus
Query 27021 CCTCCGCGCAACCGCAATACCAAATGTAACGTAGAGTCTTTTTGAATATTGTAGTCGCTC 27080
||||| || | |||| |||| ||| | ||||| ||||| || || || ||||| |
Sbjct 4014 CCTCCTCGAAGACGCAGAACCAGATGAAGAGTAGATTCTTTCTGGATGTTATAGTC--TG 3957
Query 27081 ATGTTGCGCT--CGTCTTCGAGCTGTTTACCGGCGTAAATGAGACGCTGTTGATCCGGCG 27138
| || || ||||||| | ||||||||| ||| | || | ||| || || || || |
Sbjct 3956 AGAGTGTCCTACCGTCTTCCAACTGTTTACCAGCGAAGATCAAACGTTGCTGGTCAGGAG 3897
Query 27139 GCACACCCTCTTTATCGGCGATCTTGTTTTTCAGGGTTTCTACAGTGTCTGTGGCTTCAA 27198
| | || ||||| || ||| || ||| | | |||||| ||||| | ||||||||
Sbjct 3896 GAATGCCTTCTTTGTCTTGGATTTTAGCTTTTACGTTTTCTATTGTGTCAGAGGCTTCAA 3837
Query 27199 CTTCTAGAGTTATAGATTTGCCCGTCAGAGTTTTCACAAAGATTTGCAT 27247
|||| ||||| || | ||| || || ||||||||||| |||||||||||
Sbjct 3836 CTTCAAGAGTGATGGTTTTACCGGTGAGAGTTTTCACGAAGATTTGCAT 3788
Score = 89.7 bits (98), Expect = 4e-13
Identities = 157/229 (69%), Gaps = 0/229 (0%)
Strand=Plus/Minus
Query 27019 TGCCTCCGCGCAACCGCAATACCAAATGTAACGTAGAGTCTTTTTGAATATTGTAGTCGC 27078
||||||| || | |||| || | ||| | ||||| || || || || ||||| |||
Sbjct 3332 TGCCTCCACGAAGACGCAGAACAAGATGAAGTGTAGATTCCTTCTGGATGTTGTAATCGG 3273
Query 27079 TCATGTTGCGCTCGTCTTCGAGCTGTTTACCGGCGTAAATGAGACGCTGTTGATCCGGCG 27138
| | | | | || || || || || || || | || | ||| || ||||| || |
Sbjct 3272 AAAGGGTTCTGCCATCCTCTAGTTGCTTTCCAGCAAAGATTAAACGTTGCTGATCTGGAG 3213
Query 27139 GCACACCCTCTTTATCGGCGATCTTGTTTTTCAGGGTTTCTACAGTGTCTGTGGCTTCAA 27198
| | ||| ||||| || |||||| ||| | | | |||| |||||| | ||||| |
Sbjct 3212 GAATACCTTCTTTGTCTTGGATCTTAGCTTTGACGTTCTCTATAGTGTCAGAAGCTTCCA 3153
Query 27199 CTTCTAGAGTTATAGATTTGCCCGTCAGAGTTTTCACAAAGATTTGCAT 27247
| || || || || | ||| || || || ||||| ||||||||||||||
Sbjct 3152 CCTCAAGGGTGATGGTTTTCCCAGTGAGGGTTTTTACAAAGATTTGCAT 3104
>seq4212
Length=4365329
Score = 118 bits (130), Expect = 9e-22
Identities = 160/222 (72%), Gaps = 6/222 (3%)
Strand=Plus/Minus
Query 130756 AATGATTTGAAAATCACCAGCCAGGACGCGTCTAACGTAAATGTTGCTCGTGAACGGTTC 130815
|||||| ||| || || | || || || || || || || ||||| || | |||||
Sbjct 3416236 AATGAT---AAATTCTCCCGACAATACACGCCTCACATAGATATTGCTTGTATATGGTTC 3416180
Query 130816 AAAGGATTCGTTGTTGCCGAATATTTGTGCTGTAGTTGCGGTGGGCATGTATGCCACTAA 130875
|| |||||||| || || || || |||||||| | || || ||||| ||| | |||
Sbjct 3416179 AATAGATTCGTTATTCCCTAAAATCTGTGCTGTCGAGGCCGTTGGCATAGGTGCTATTAA 3416120
Query 130876 TAGAGAATTACGAAGACCGTGCGTCGTGATTTTTCGCTTCAATTCATCCCAATCCCATAG 130935
|| ||||| | | |||||| ||| ||| || |||||||||||||||||||||||
Sbjct 3416119 AAGGGAATTTCTTACTCCGTGCTTCGCGATCTTCGCCTTCAATTCATCCCAATCCCATAA 3416060
Query 130936 AGAGGTAGGTTTGACATTGTTCCACATATCAAATTGTAGTAT 130977
| || || || || ||||||||||||| |||| || ||
Sbjct 3416059 ATTTGTCGGCTTAAC---GTTCCACATATCATATTGGAGGAT 3416021
>seq3876
Length=890137
Score = 107 bits (118), Expect = 2e-18
Identities = 165/234 (71%), Gaps = 1/234 (0%)
Strand=Plus/Plus
Query 27021 CCTCCGCGCAACCGCAATACCAAATGTAACGTAGAGTCTTTTTGAATATTGTAGTCGCTC 27080
|| || ||||| | | |||||||| | || || || || ||||||||||| |||
Sbjct 521518 CCACCACGCAATCTGAGGACCAAATGGAGAGTGGATTCCTTCTGAATATTGTAATCGGAT 521577
Query 27081 ATGTTGCGCTCGTCTTCGAGCTGTTTACCGGCGTAAATGAGACGCTGTTGATCCGGCGGC 27140
| | | || ||||||| ||||| || || ||| | || | |||||| ||||| || ||
Sbjct 521578 AAGGTACGTCCGTCTTCAAGCTGCTTTCCAGCGAAGATCAAACGCTGCTGATCGGGTGGG 521637
Query 27141 ACACCCTCTTTATCGGCGATCTTGTTTTTCAGGGTTTCTACAGTGTCTGTGGCTTCAACT 27200
| ||| || ||||| |||||| ||| | | || | ||||| | |||||||||
Sbjct 521638 ATACCTTCCTTATCTTGGATCTTTGCTTTTACATTCTCGATGGTGTCAGAAGCTTCAACT 521697
Query 27201 TCTAGAGTTATAGATTTGCCCGTCAGAGTTTTCACAAAGATTTGCATAGCTGCT 27254
|| || ||||| | || || |||| || ||||| || || ||||||| ||||
Sbjct 521698 TCAAGGGTTATGGTCTTCCCGGTCAATGTCTTCACGAAAATCTGCATAG-TGCT 521750
Score = 100 bits (110), Expect = 2e-16
Identities = 159/228 (70%), Gaps = 0/228 (0%)
Strand=Plus/Plus
Query 27021 CCTCCGCGCAACCGCAATACCAAATGTAACGTAGAGTCTTTTTGAATATTGTAGTCGCTC 27080
|| ||||| | || ||| |||||||| | ||||| || || ||||| || || ||
Sbjct 519922 CCGCCGCGAAGCCTCAAAACCAAATGCAGGGTAGATTCCTTCTGAATGTTATAATCAGAA 519981
Query 27081 ATGTTGCGCTCGTCTTCGAGCTGTTTACCGGCGTAAATGAGACGCTGTTGATCCGGCGGC 27140
| | || |||||||||||||||| ||||| | || | | ||| ||||| || ||
Sbjct 519982 AGCGTACGGCCGTCTTCGAGCTGTTTTCCGGCAAAGATCAACCTCTGCTGATCGGGAGGA 520041
Query 27141 ACACCCTCTTTATCGGCGATCTTGTTTTTCAGGGTTTCTACAGTGTCTGTGGCTTCAACT 27200
| || |||||||| || || |||| | |||| | ||||| | || |||||
Sbjct 520042 ATGCCTTCTTTATCTTGAATTTTCGCCTTCACGTTTTCGATCGTGTCCGAAGCCTCAACC 520101
Query 27201 TCTAGAGTTATAGATTTGCCCGTCAGAGTTTTCACAAAGATTTGCATA 27248
|| || || |||| ||| || || ||||| || ||||| || ||||||
Sbjct 520102 TCCAGTGTGATAGTTTTACCAGTGAGAGTCTTGACAAAAATCTGCATA 520149
Score = 98.7 bits (108), Expect = 8e-16
Identities = 158/227 (70%), Gaps = 0/227 (0%)
Strand=Plus/Plus
Query 27021 CCTCCGCGCAACCGCAATACCAAATGTAACGTAGAGTCTTTTTGAATATTGTAGTCGCTC 27080
|| || || || || | |||||||| | || || ||||||||||| ||||||||
Sbjct 521290 CCACCACGTAAACGGAGAACCAAATGCAGTGTGGATTCTTTTTGAATGTTGTAGTCAGAA 521349
Query 27081 ATGTTGCGCTCGTCTTCGAGCTGTTTACCGGCGTAAATGAGACGCTGTTGATCCGGCGGC 27140
| |||| | ||||| |||||||| |||||| |||| | | ||| ||||| || ||
Sbjct 521350 AGAGTGCGGCCATCTTCAAGCTGTTTTCCGGCGAAAATCAATCTCTGCTGATCTGGAGGG 521409
Query 27141 ACACCCTCTTTATCGGCGATCTTGTTTTTCAGGGTTTCTACAGTGTCTGTGGCTTCAACT 27200
| || ||||| || || || ||| | |||| | ||||| | || || |||
Sbjct 521410 ATTCCTTCTTTGTCTTGAATTTTTGCTTTGACATTTTCGATCGTGTCAGATGCCTCGACT 521469
Query 27201 TCTAGAGTTATAGATTTGCCCGTCAGAGTTTTCACAAAGATTTGCAT 27247
|| | || || | ||| || ||||| ||||| |||||||| |||||
Sbjct 521470 TCCAACGTGATGGTTTTTCCTGTCAGGGTTTTGACAAAGATCTGCAT 521516
Score = 87.8 bits (96), Expect = 2e-12
Identities = 156/228 (68%), Gaps = 0/228 (0%)
Strand=Plus/Plus
Query 27021 CCTCCGCGCAACCGCAATACCAAATGTAACGTAGAGTCTTTTTGAATATTGTAGTCGCTC 27080
|| || || || || | |||||||| | || || ||||||||||| ||||||||
Sbjct 521062 CCACCACGTAAACGGAGAACCAAATGCAGTGTGGATTCTTTTTGAATGTTGTAGTCAGAA 521121
Query 27081 ATGTTGCGCTCGTCTTCGAGCTGTTTACCGGCGTAAATGAGACGCTGTTGATCCGGCGGC 27140
| |||| | ||||| |||||||| |||||| | || | | ||| ||||| || ||
Sbjct 521122 AGAGTGCGGCCATCTTCAAGCTGTTTTCCGGCGAAGATCAATCTCTGCTGATCTGGAGGG 521181
Query 27141 ACACCCTCTTTATCGGCGATCTTGTTTTTCAGGGTTTCTACAGTGTCTGTGGCTTCAACT 27200
| || ||||| || || || ||| | |||| | ||||| | || || |||
Sbjct 521182 ATTCCTTCTTTGTCTTGAATTTTTGCTTTGACATTTTCGATCGTGTCAGATGCCTCGACT 521241
Query 27201 TCTAGAGTTATAGATTTGCCCGTCAGAGTTTTCACAAAGATTTGCATA 27248
|| | || || | ||| || |||| ||||| || || |||||||||
Sbjct 521242 TCCAACGTGATGGTTTTTCCGGTCAATGTTTTGACGAAAATTTGCATA 521289
>seq4069
Length=1127261
Score = 100 bits (110), Expect = 2e-16
Identities = 136/190 (72%), Gaps = 0/190 (0%)
Strand=Plus/Minus
Query 27058 CTTTTTGAATATTGTAGTCGCTCATGTTGCGCTCGTCTTCGAGCTGTTTACCGGCGTAAA 27117
||||||| ||||| || ||| || |||| | || || || ||||| |||||| | |
Sbjct 161737 CTTTTTGGATATTATAATCGGACAGAGTGCGTCCATCCTCCAGTTGTTTGCCGGCGAAGA 161678
Query 27118 TGAGACGCTGTTGATCCGGCGGCACACCCTCTTTATCGGCGATCTTGTTTTTCAGGGTTT 27177
|||| ||||||||||| ||||| | ||||| || || ||||||| || | | |
Sbjct 161677 TGAGTCGCTGTTGATCTGGCGGAATTCCCTCCTTGTCCTGGATCTTGGCCTTGACATTCT 161618
Query 27178 CTACAGTGTCTGTGGCTTCAACTTCTAGAGTTATAGATTTGCCCGTCAGAGTTTTCACAA 27237
| | || || | ||| || || || || || || | ||| ||||| || |||||||| |
Sbjct 161617 CGATGGTATCGGAGGCCTCTACCTCGAGGGTGATGGTTTTACCCGTGAGGGTTTTCACGA 161558
Query 27238 AGATTTGCAT 27247
|||| |||||
Sbjct 161557 AGATCTGCAT 161548
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 424910458000776
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