Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Trachymyrmex_20zeteki_20[refseq_20GCF_5F001594055.1_202016-03-31] 4,623 sequences; 267,973,152 total letters Query= NC_028092.1 Length=193301 Score E Sequences producing significant alignments: (Bits) Value seq3537 82.4 9e-11 >seq3537 Length=3457499 Score = 82.4 bits (90), Expect = 9e-11 Identities = 151/219 (69%), Gaps = 2/219 (1%) Strand=Plus/Minus Query 130037 TCGTCACGGGAGATGAGTTCATTCGAGAAGCACAGACCTGGCATGAGACCCCGCTTCTTC 130096 ||||| || ||||||||||| || |||| ||||||||||||| || || |||||| Sbjct 3065263 TCGTCTCGCGAGATGAGTTCGTTGCTGAAGGTGAGACCTGGCATGACTCCTCGTTTCTTC 3065204 Query 130097 AACCAGAAAATCGCACAAAATGAGCCAGAGAAGAAGATCCCCTCCACACACGCGAACGCA 130156 | ||| ||||| || ||| |||| ||||||||| ||||| || ||| || || Sbjct 3065203 AGCCAAAAAATGGCTGCAAAACTGCCACTGAAGAAGATACCCTCGACTGCCGCAAATGCG 3065144 Query 130157 AAGAGACGCTCAGCAAA-GGAGCGGGACTTTGTATCAAACCACTTCATCGCCCACTGCGC 130215 | | ||| |||| ||| | ||| | || || | ||| || | ||||| | || Sbjct 3065143 ACTACACGTTCAGGAAACGTAGC-GCTCTCATGATTGATCCAGTTTAATGCCCAATTAGC 3065085 Query 130216 CTTTTTCTCGATACACGGGACGGTCTGGATCGCTTCAAA 130254 ||| ||| | | ||| || | |||| ||||| | ||| Sbjct 3065084 CTTCTTCCCCACACAAGGAAGTGTCTCAATCGCATTAAA 3065046 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 618399462175880