Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Trachymyrmex_20zeteki_20[refseq_20GCF_5F001594055.1_202016-03-31]
4,623 sequences; 267,973,152 total letters
Query= NC_028491.1
Length=98392
Score E
Sequences producing significant alignments: (Bits) Value
seq3876 154 9e-33
seq4552 143 2e-29
>seq3876
Length=890137
Score = 154 bits (170), Expect = 9e-33
Identities = 164/211 (78%), Gaps = 4/211 (2%)
Strand=Plus/Plus
Query 34498 ACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGAAAGTGTTCGCTCGTCTTCA 34557
|||||||| | ||| ||||| ||||||||||||||||||||||| || ||||||||
Sbjct 520396 ACCAAATGCAAAGTCGATTCCTTCTGAATGTTATAATCTGAAAGTGTGCGACCGTCTTCA 520455
Query 34558 AGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGGCACTCCCTCCTTGTCTGTG 34617
|| ||||| ||||| || || || | ||| |||||||| || | ||| |||||||| ||
Sbjct 520456 AGCTGTTTTCCGGCGAAGATCAACCTCTGCTGGTCCGGGGGGATTCCTTCCTTGTC-CTG 520514
Query 34618 ATCTTTTGTTTTAACGAT-AAAATTGTGT-CTTCGCTCTCCACTTCCACGGTTATCGTTT 34675
| ||||| ||| ||| | ||| |||| | |||| || ||||||| || || || |
Sbjct 520515 AATTTTTGCTTTCACGTTCTCAATCGTGTCCGACGCT-TCGACTTCCAGAGTGATTGTCT 520573
Query 34676 TACCGGTTAACGTTTTCACAAAAATCTGCAT 34706
||||||| | |||||| |||||||| |||||
Sbjct 520574 TACCGGTGAGCGTTTTGACAAAAATTTGCAT 520604
Score = 125 bits (138), Expect = 4e-24
Identities = 157/213 (74%), Gaps = 2/213 (1%)
Strand=Plus/Plus
Query 34495 AACACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGAAAGTGTTCGCTCGTCT 34554
|| |||||||| | ||| |||||||||||||| || || ||||| || || | |||
Sbjct 520621 AAAACCAAATGCAATGTGGATTCCTTTTGAATGTTGTAGTCAGAAAGGGTACGGCCATCT 520680
Query 34555 TCAAGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGGCACTCCCTCCTTGTCT 34614
||||| ||||| ||||| || || || | ||| |||||||| || | ||| ||||||||
Sbjct 520681 TCAAGCTGTTTTCCGGCGAAGATCAACCTCTGCTGGTCCGGAGGGATTCCTTCCTTGTC- 520739
Query 34615 GTGATCTTTTGTTTTAACGAT-AAAATTGTGTCTTCGCTCTCCACTTCCACGGTTATCGT 34673
||| ||||| ||| ||| | ||| ||||| ||| ||||||| || || ||
Sbjct 520740 CTGAATTTTTGCTTTCACGTTCTCAATCGTGTCAGATGCCTCAACTTCCAATGTGATGGT 520799
Query 34674 TTTACCGGTTAACGTTTTCACAAAAATCTGCAT 34706
|| ||||| || ||||| || ||||| |||||
Sbjct 520800 CTTTCCGGTCAATGTTTTGACGAAAATTTGCAT 520832
Score = 120 bits (132), Expect = 2e-22
Identities = 167/229 (73%), Gaps = 4/229 (2%)
Strand=Plus/Plus
Query 34480 CCGCCTCTAAGACGCAACACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGAA 34539
||||| | ||| | ||| || ||||| || || ||||| |||||||||||||| |||
Sbjct 520150 CCGCCGCGAAGCCTCAAAACTAAATGCAGGGTAGATTCCTTCTGAATGTTATAATCAGAA 520209
Query 34540 AGTGTTCGCTCGTCTTCAAGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGGC 34599
|| || || ||||||| || ||||| |||||||| || || | ||| || || || ||
Sbjct 520210 AGCGTACGGCCGTCTTCGAGCTGTTTTCCGGCAAAGATCAACCTCTGCTGATCTGGAGGG 520269
Query 34600 ACTCCCTCCTTGTCTGTGATCTTTTGTTTTAACGAT-AAAATTGTGT-CTTCGCTCTCCA 34657
| ||| ||||||||| ||| ||| | ||| || | || |||| | ||| ||| |
Sbjct 520270 ATTCCTTCCTTGTCT-TGAATTTTGGCTTTGACATTCTCGATCGTGTCCGACGC-CTCAA 520327
Query 34658 CTTCCACGGTTATCGTTTTACCGGTTAACGTTTTCACAAAAATCTGCAT 34706
|||||| || || || || || ||||| || || || ||||| |||||
Sbjct 520328 CTTCCAACGTGATGGTCTTTCCTGTTAATGTCTTGACGAAAATTTGCAT 520376
Score = 114 bits (126), Expect = 8e-21
Identities = 153/210 (73%), Gaps = 2/210 (1%)
Strand=Plus/Plus
Query 34498 ACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGAAAGTGTTCGCTCGTCTTCA 34557
||||||||||||||| ||||| ||||| || ||||| || | || || ||||||||
Sbjct 521536 ACCAAATGGAGAGTGGATTCCTTCTGAATATTGTAATCGGATAAGGTACGTCCGTCTTCA 521595
Query 34558 AGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGGCACTCCCTCCTTGTCTGTG 34617
|| || || || || || || |||||||| || || || || | || ||||| ||| |
Sbjct 521596 AGCTGCTTTCCAGCGAAGATCAAACGCTGCTGATCGGGTGGGATACCTTCCTTATCTTGG 521655
Query 34618 ATCTTTTGTTTTAACGATAAAATTGTGTC-TTCGCTCTCCACTTCCACGGTTATCGTTTT 34676
|||||| ||||| || ||||| ||| || ||||| | |||||| || ||
Sbjct 521656 ATCTTTGCTTTTACATTCTCGATGGTGTCAGAAGCT-TCAACTTCAAGGGTTATGGTCTT 521714
Query 34677 ACCGGTTAACGTTTTCACAAAAATCTGCAT 34706
||||| || || ||||| |||||||||||
Sbjct 521715 CCCGGTCAATGTCTTCACGAAAATCTGCAT 521744
Score = 111 bits (122), Expect = 1e-19
Identities = 163/228 (71%), Gaps = 2/228 (1%)
Strand=Plus/Plus
Query 34480 CCGCCTCTAAGACGCAACACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGAA 34539
||||| | ||| | ||| |||||||| || || ||||| |||||||||||||| |||
Sbjct 519922 CCGCCGCGAAGCCTCAAAACCAAATGCAGGGTAGATTCCTTCTGAATGTTATAATCAGAA 519981
Query 34540 AGTGTTCGCTCGTCTTCAAGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGGC 34599
|| || || ||||||| || ||||| |||||||| || || | ||| || || || ||
Sbjct 519982 AGCGTACGGCCGTCTTCGAGCTGTTTTCCGGCAAAGATCAACCTCTGCTGATCGGGAGGA 520041
Query 34600 ACTCCCTCCTTGTCTGTGATCTTTTGTTTTAACG-ATAAAATTGTGTCTTCGCTCTCCAC 34658
| || || || ||| ||| ||| | || ||| | || ||||| ||| ||
Sbjct 520042 ATGCCTTCTTTATCT-TGAATTTTCGCCTTCACGTTTTCGATCGTGTCCGAAGCCTCAAC 520100
Query 34659 TTCCACGGTTATCGTTTTACCGGTTAACGTTTTCACAAAAATCTGCAT 34706
|||| || || |||||||| || | || || ||||||||||||||
Sbjct 520101 CTCCAGTGTGATAGTTTTACCAGTGAGAGTCTTGACAAAAATCTGCAT 520148
Score = 111 bits (122), Expect = 1e-19
Identities = 152/210 (72%), Gaps = 2/210 (1%)
Strand=Plus/Plus
Query 34498 ACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGAAAGTGTTCGCTCGTCTTCA 34557
|||||||| || ||| || ||||||||||| || || ||||| || || | ||||||
Sbjct 521080 ACCAAATGCAGTGTGGATTCTTTTTGAATGTTGTAGTCAGAAAGAGTGCGGCCATCTTCA 521139
Query 34558 AGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGGCACTCCCTCCTTGTCTGTG 34617
|| ||||| ||||| || || || | ||| || || || || | ||| || |||||| ||
Sbjct 521140 AGCTGTTTTCCGGCGAAGATCAATCTCTGCTGATCTGGAGGGATTCCTTCTTTGTCT-TG 521198
Query 34618 ATCTTTTGTTTTAAC-GATAAAATTGTGTCTTCGCTCTCCACTTCCACGGTTATCGTTTT 34676
| ||||| ||| || | || ||||| ||| ||||||| || || |||||
Sbjct 521199 AATTTTTGCTTTGACATTTTCGATCGTGTCAGATGCCTCGACTTCCAACGTGATGGTTTT 521258
Query 34677 ACCGGTTAACGTTTTCACAAAAATCTGCAT 34706
||||| || ||||| || ||||| |||||
Sbjct 521259 TCCGGTCAATGTTTTGACGAAAATTTGCAT 521288
Score = 105 bits (116), Expect = 4e-18
Identities = 151/210 (72%), Gaps = 2/210 (1%)
Strand=Plus/Plus
Query 34498 ACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGAAAGTGTTCGCTCGTCTTCA 34557
|||||||| || ||| || ||||||||||| || || ||||| || || | ||||||
Sbjct 521308 ACCAAATGCAGTGTGGATTCTTTTTGAATGTTGTAGTCAGAAAGAGTGCGGCCATCTTCA 521367
Query 34558 AGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGGCACTCCCTCCTTGTCTGTG 34617
|| ||||| ||||| || || || | ||| || || || || | ||| || |||||| ||
Sbjct 521368 AGCTGTTTTCCGGCGAAAATCAATCTCTGCTGATCTGGAGGGATTCCTTCTTTGTCT-TG 521426
Query 34618 ATCTTTTGTTTTAAC-GATAAAATTGTGTCTTCGCTCTCCACTTCCACGGTTATCGTTTT 34676
| ||||| ||| || | || ||||| ||| ||||||| || || |||||
Sbjct 521427 AATTTTTGCTTTGACATTTTCGATCGTGTCAGATGCCTCGACTTCCAACGTGATGGTTTT 521486
Query 34677 ACCGGTTAACGTTTTCACAAAAATCTGCAT 34706
|| || | ||||| ||||| ||||||||
Sbjct 521487 TCCTGTCAGGGTTTTGACAAAGATCTGCAT 521516
>seq4552
Length=86203
Score = 143 bits (158), Expect = 2e-29
Identities = 173/230 (75%), Gaps = 4/230 (2%)
Strand=Plus/Minus
Query 34480 CCGCCTCTAAGACGCAACACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGAA 34539
|| |||| |||||||| |||| ||| || ||| || |||||||| |||||||| ||
Sbjct 3558 CCTCCTCGAAGACGCAGAACCAGATGAAGTGTGGATTCTTTTTGAATATTATAATCAGAG 3499
Query 34540 AGTGTTCGCTCGTCTTCAAGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGGC 34599
|| |||| | |||||||||||||| || ||||| || | |||||| || ||||| ||
Sbjct 3498 AGAGTTCTGCCATCTTCAAGTTGTTTGCCAGCAAAAATCAGACGCTGCTGATCCGGGGGA 3439
Query 34600 ACTCCCTCCTTGTCTGTGATCTTTTGTTTTAAC-GATAAAATTGTGTCT-TCGCTCTCCA 34657
| |||||| |||||| ||| ||| | ||| || | ||| |||||| ||| || |
Sbjct 3438 ATTCCCTCTTTGTCTTGGAT-TTTGGCTTTCACATTTTCAATAGTGTCTGAAGCT-TCGA 3381
Query 34658 CTTCCACGGTTATCGTTTTACCGGTTAACGTTTTCACAAAAATCTGCATG 34707
|||| | ||| || |||||||| || | || |||||||| |||||||||
Sbjct 3380 CTTCGAGGGTGATGGTTTTACCCGTAAGAGTCTTCACAAAGATCTGCATG 3331
Score = 138 bits (152), Expect = 7e-28
Identities = 171/229 (75%), Gaps = 4/229 (2%)
Strand=Plus/Minus
Query 34480 CCGCCTCTAAGACGCAACACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGAA 34539
|| |||| |||||||| ||||| || || ||| || ||||| ||||| || || |||
Sbjct 4242 CCTCCTCGAAGACGCAGAACCAAGTGAAGTGTGGATTCTTTTTGGATGTTGTAGTCGGAA 4183
Query 34540 AGTGTTCGCTCGTCTTCAAGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGGC 34599
|| |||| | ||||| |||||||||||||| || || | ||||||||| ||||| ||
Sbjct 4182 AGAGTTCTGCCATCTTCCAGTTGTTTACCGGCGAAGATCAGACGCTGTTGATCCGGTGGA 4123
Query 34600 ACTCCCTCCTTGTCTGTGATCTTTTGTTTTAACG-ATAAAATTGTGTCT-TCGCTCTCCA 34657
| |||||| ||||| ||| ||| | || ||| | ||| |||||| ||| || |
Sbjct 4122 ATTCCCTCTTTGTCCTGGAT-TTTAGCCTTTACGTTTTCAATGGTGTCTGAAGCT-TCGA 4065
Query 34658 CTTCCACGGTTATCGTTTTACCGGTTAACGTTTTCACAAAAATCTGCAT 34706
|||| | ||| || ||||||||||| | |||||||| || || |||||
Sbjct 4064 CTTCGAGGGTAATGGTTTTACCGGTGAGAGTTTTCACGAAGATTTGCAT 4016
Score = 122 bits (134), Expect = 5e-23
Identities = 163/227 (72%), Gaps = 0/227 (0%)
Strand=Plus/Minus
Query 34480 CCGCCTCTAAGACGCAACACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGAA 34539
|| |||| |||||||| |||| ||| ||||| || || || |||||||| |||||
Sbjct 3786 CCTCCTCGAAGACGCAGAACCAGATGAAGAGTAGATTCTTTCTGGATGTTATAGTCTGAG 3727
Query 34540 AGTGTTCGCTCGTCTTCAAGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGGC 34599
||||| | ||||||| | |||||||| || || || ||||| || ||||| || ||
Sbjct 3726 AGTGTCCTACCGTCTTCCAACTGTTTACCAGCGAAGATCAAACGTTGCTGGTCAGGAGGA 3667
Query 34600 ACTCCCTCCTTGTCTGTGATCTTTTGTTTTAACGATAAAATTGTGTCTTCGCTCTCCACT 34659
| || || |||||| |||||| ||||| | |||||||| | || |||
Sbjct 3666 ATGCCTTCTTTGTCTTGGATCTTAGCTTTTACGTTTTCTATTGTGTCAGAGGCTTCAACT 3607
Query 34660 TCCACGGTTATCGTTTTACCGGTTAACGTTTTCACAAAAATCTGCAT 34706
|| | ||| || ||||||||||| | |||||||| || || |||||
Sbjct 3606 TCAAGGGTGATGGTTTTACCGGTGAGAGTTTTCACGAAGATTTGCAT 3560
Score = 120 bits (132), Expect = 2e-22
Identities = 167/229 (73%), Gaps = 4/229 (2%)
Strand=Plus/Minus
Query 34480 CCGCCTCTAAGACGCAACACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGAA 34539
|| || | ||| || || || || ||||| || || ||||| ||||| ||||| |||
Sbjct 4470 CCTCCGCGAAGTCGTAAAACTAAGTGGAGTGTAGATTCTTTTTGGATGTTGTAATCAGAA 4411
Query 34540 AGTGTTCGCTCGTCTTCAAGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGGC 34599
|| |||| ||||||| ||||| || || || || |||||||||||||| || || ||
Sbjct 4410 AGAGTTCTGCCGTCTTCCAGTTGCTTGCCAGCGAAGATTAAACGCTGTTGATCTGGAGGG 4351
Query 34600 ACTCCCTCCTTGTCTGTGATCTTTTGTTTTAACG-ATAAAATTGTGTCT-TCGCTCTCCA 34657
| ||| || ||||| ||| ||| | || ||| | ||| |||||| ||| || |
Sbjct 4350 ATTCCTTCTTTGTC-CTGAATTTTGGCCTTCACGTTTTCAATAGTGTCTGAAGCT-TCGA 4293
Query 34658 CTTCCACGGTTATCGTTTTACCGGTTAACGTTTTCACAAAAATCTGCAT 34706
|||| | || || |||||||| || | |||||||||||||| |||||
Sbjct 4292 CTTCAAGAGTGATGGTTTTACCTGTGAGAGTTTTCACAAAAATTTGCAT 4244
Score = 116 bits (128), Expect = 2e-21
Identities = 164/228 (72%), Gaps = 2/228 (1%)
Strand=Plus/Minus
Query 34480 CCGCCTCTAAGACGCAACACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGAA 34539
|| |||| |||||||| |||| ||| ||||| || || || |||||||| |||||
Sbjct 4014 CCTCCTCGAAGACGCAGAACCAGATGAAGAGTAGATTCTTTCTGGATGTTATAGTCTGAG 3955
Query 34540 AGTGTTCGCTCGTCTTCAAGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGGC 34599
||||| | ||||||| | |||||||| || || || ||||| || ||||| || ||
Sbjct 3954 AGTGTCCTACCGTCTTCCAACTGTTTACCAGCGAAGATCAAACGTTGCTGGTCAGGAGGA 3895
Query 34600 ACTCCCTCCTTGTCTGTGATCTTTTGTTTTAACGATAAA-ATTGTGTCTTCGCTCTCCAC 34658
| || || |||||| ||| ||| | ||| ||| | |||||||| | || ||
Sbjct 3894 ATGCCTTCTTTGTCTTGGAT-TTTAGCTTTTACGTTTTCTATTGTGTCAGAGGCTTCAAC 3836
Query 34659 TTCCACGGTTATCGTTTTACCGGTTAACGTTTTCACAAAAATCTGCAT 34706
||| | || || ||||||||||| | |||||||| || || |||||
Sbjct 3835 TTCAAGAGTGATGGTTTTACCGGTGAGAGTTTTCACGAAGATTTGCAT 3788
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 314711867249159
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