Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Trachymyrmex_20zeteki_20[refseq_20GCF_5F001594055.1_202016-03-31] 4,623 sequences; 267,973,152 total letters Query= NC_029692.1 Length=362276 Score E Sequences producing significant alignments: (Bits) Value seq4552 179 9e-40 seq3876 179 9e-40 seq4069 154 3e-32 >seq4552 Length=86203 Score = 179 bits (198), Expect = 9e-40 Identities = 173/222 (78%), Gaps = 0/222 (0%) Strand=Plus/Minus Query 210894 CGAAGTCTTAGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTC 210953 ||||| | || || || |||||||| || ||||| ||||||||||| || | || ||| Sbjct 3780 CGAAGACGCAGAACCAGATGAAGAGTAGATTCTTTCTGGATGTTATAGTCTGAGAGTGTC 3721 Query 210954 CTTCCATCTTCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCT 211013 || || ||||||| ||| || || |||||||| | ||||| ||||||||||||| ||| Sbjct 3720 CTACCGTCTTCCAACTGTTTACCAGCGAAGATCAAACGTTGCTGGTCAGGAGGAATGCCT 3661 Query 211014 TCCTTGTCCTGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGA 211073 || ||||| |||||||| ||| |||||||| || ||||||||| |||||| || || Sbjct 3660 TCTTTGTCTTGGATCTTAGCTTTTACGTTTTCTATTGTGTCAGAGGCTTCAACTTCAAGG 3601 Query 211074 GTGATCGTCTTTCCCGTGAGAGTCTTTACAAACACCTGCATT 211115 ||||| || || || |||||||| || || || | |||||| Sbjct 3600 GTGATGGTTTTACCGGTGAGAGTTTTCACGAAGATTTGCATT 3559 Score = 179 bits (198), Expect = 9e-40 Identities = 173/222 (78%), Gaps = 0/222 (0%) Strand=Plus/Minus Query 210894 CGAAGTCTTAGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTC 210953 ||||| | || || || |||||||| || ||||| ||||||||||| || | || ||| Sbjct 4008 CGAAGACGCAGAACCAGATGAAGAGTAGATTCTTTCTGGATGTTATAGTCTGAGAGTGTC 3949 Query 210954 CTTCCATCTTCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCT 211013 || || ||||||| ||| || || |||||||| | ||||| ||||||||||||| ||| Sbjct 3948 CTACCGTCTTCCAACTGTTTACCAGCGAAGATCAAACGTTGCTGGTCAGGAGGAATGCCT 3889 Query 211014 TCCTTGTCCTGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGA 211073 || ||||| ||||| || ||| |||||||| || ||||||||| |||||| || ||| Sbjct 3888 TCTTTGTCTTGGATTTTAGCTTTTACGTTTTCTATTGTGTCAGAGGCTTCAACTTCAAGA 3829 Query 211074 GTGATCGTCTTTCCCGTGAGAGTCTTTACAAACACCTGCATT 211115 ||||| || || || |||||||| || || || | |||||| Sbjct 3828 GTGATGGTTTTACCGGTGAGAGTTTTCACGAAGATTTGCATT 3787 Score = 170 bits (188), Expect = 4e-37 Identities = 171/222 (77%), Gaps = 0/222 (0%) Strand=Plus/Minus Query 210894 CGAAGTCTTAGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTC 210953 ||||||| || || | ||| || || || |||||||||||||| ||||| | ||| || Sbjct 4464 CGAAGTCGTAAAACTAAGTGGAGTGTAGATTCTTTTTGGATGTTGTAATCAGAAAGAGTT 4405 Query 210954 CTTCCATCTTCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCT 211013 || || |||||||| |||||||| |||||||| | || ||||| || ||||| | |||| Sbjct 4404 CTGCCGTCTTCCAGTTGCTTGCCAGCGAAGATTAAACGCTGTTGATCTGGAGGGATTCCT 4345 Query 211014 TCCTTGTCCTGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGA 211073 || |||||||| || || ||||||||||| || ||||| || ||| || || ||| Sbjct 4344 TCTTTGTCCTGAATTTTGGCCTTCACGTTTTCAATAGTGTCTGAAGCTTCGACTTCAAGA 4285 Query 211074 GTGATCGTCTTTCCCGTGAGAGTCTTTACAAACACCTGCATT 211115 ||||| || || || |||||||| || ||||| | |||||| Sbjct 4284 GTGATGGTTTTACCTGTGAGAGTTTTCACAAAAATTTGCATT 4243 Score = 161 bits (178), Expect = 2e-34 Identities = 169/222 (76%), Gaps = 0/222 (0%) Strand=Plus/Minus Query 210894 CGAAGTCTTAGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTC 210953 ||||| | || || | |||||| ||||| |||||||||||||| || || | ||| || Sbjct 4236 CGAAGACGCAGAACCAAGTGAAGTGTGGATTCTTTTTGGATGTTGTAGTCGGAAAGAGTT 4177 Query 210954 CTTCCATCTTCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCT 211013 || ||||||||||| || || || |||||||| || || ||||| || || |||| ||| Sbjct 4176 CTGCCATCTTCCAGTTGTTTACCGGCGAAGATCAGACGCTGTTGATCCGGTGGAATTCCC 4117 Query 211014 TCCTTGTCCTGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGA 211073 || ||||||||||| || || |||||||| |||||||| || ||| || ||||| Sbjct 4116 TCTTTGTCCTGGATTTTAGCCTTTACGTTTTCAATGGTGTCTGAAGCTTCGACTTCGAGG 4057 Query 211074 GTGATCGTCTTTCCCGTGAGAGTCTTTACAAACACCTGCATT 211115 || || || || || |||||||| || || || | |||||| Sbjct 4056 GTAATGGTTTTACCGGTGAGAGTTTTCACGAAGATTTGCATT 4015 >seq3876 Length=890137 Score = 179 bits (198), Expect = 9e-40 Identities = 171/219 (78%), Gaps = 0/219 (0%) Strand=Plus/Plus Query 210896 AAGTCTTAGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCT 210955 ||||| || ||||||||||| || |||||||| || || ||||| || | | |||| Sbjct 519702 AAGTCGAAGTACAAGGTGAAGTGTAGACTCTTTCTGAATATTATAGTCGGATAAAGTCCG 519761 Query 210956 TCCATCTTCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTC 211015 |||||| || ||||||||||| ||||| || || | |||||| || ||||||| ||||| Sbjct 519762 TCCATCCTCTAGCTGCTTGCCCGCGAAAATCAGTCTTTGTTGATCGGGAGGAATGCCTTC 519821 Query 211016 CTTGTCCTGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGT 211075 || ||||| || || ||||||||||||||| ||||| || |||||||| || || Sbjct 519822 TTTATCCTGAATTTTCGCTTTCACGTTTTCGATCGTGTCCGAAGCCTCAACCTCCAGTGT 519881 Query 211076 GATCGTCTTTCCCGTGAGAGTCTTTACAAACACCTGCAT 211114 ||| || || || ||||||||||| ||||| | |||||| Sbjct 519882 GATAGTTTTACCAGTGAGAGTCTTGACAAAAATCTGCAT 519920 Score = 140 bits (154), Expect = 8e-28 Identities = 164/222 (74%), Gaps = 0/222 (0%) Strand=Plus/Plus Query 210893 ACGAAGTCTTAGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGT 210952 ||| | ||| ||||| | || |||||||| || || || || || ||||| | | ||| Sbjct 521523 ACGCAATCTGAGGACCAAATGGAGAGTGGATTCCTTCTGAATATTGTAATCGGATAAGGT 521582 Query 210953 CCTTCCATCTTCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCC 211012 | ||| ||||| |||||||| || |||||||| | || || || || || || | || Sbjct 521583 ACGTCCGTCTTCAAGCTGCTTTCCAGCGAAGATCAAACGCTGCTGATCGGGTGGGATACC 521642 Query 211013 TTCCTTGTCCTGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAG 211072 |||||| || ||||||||| ||| || || |||||||||||||| |||||| || || Sbjct 521643 TTCCTTATCTTGGATCTTTGCTTTTACATTCTCGATGGTGTCAGAAGCTTCAACTTCAAG 521702 Query 211073 AGTGATCGTCTTTCCCGTGAGAGTCTTTACAAACACCTGCAT 211114 || || ||||| || || | ||||| || || | |||||| Sbjct 521703 GGTTATGGTCTTCCCGGTCAATGTCTTCACGAAAATCTGCAT 521744 Score = 138 bits (152), Expect = 3e-27 Identities = 163/221 (74%), Gaps = 0/221 (0%) Strand=Plus/Plus Query 210894 CGAAGTCTTAGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTC 210953 ||||| |||| || | || | ||||| || ||||| ||||| || || | |||||| Sbjct 520612 CGAAGCCTTAAAACCAAATGCAATGTGGATTCCTTTTGAATGTTGTAGTCAGAAAGGGTA 520671 Query 210954 CTTCCATCTTCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCT 211013 | |||||||| ||||| || || |||||||| | | || ||||| ||||| | |||| Sbjct 520672 CGGCCATCTTCAAGCTGTTTTCCGGCGAAGATCAACCTCTGCTGGTCCGGAGGGATTCCT 520731 Query 211014 TCCTTGTCCTGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGA 211073 ||||||||||| || ||| ||||||||| || || |||||||| ||||| || | Sbjct 520732 TCCTTGTCCTGAATTTTTGCTTTCACGTTCTCAATCGTGTCAGATGCCTCAACTTCCAAT 520791 Query 211074 GTGATCGTCTTTCCCGTGAGAGTCTTTACAAACACCTGCAT 211114 ||||| |||||||| || | || || || || | ||||| Sbjct 520792 GTGATGGTCTTTCCGGTCAATGTTTTGACGAAAATTTGCAT 520832 Score = 136 bits (150), Expect = 9e-27 Identities = 149/198 (75%), Gaps = 0/198 (0%) Strand=Plus/Plus Query 210917 AGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCTTCCAGCTGCTTGCC 210976 ||| || || || || ||||||||||| | ||| || | || ||||| ||||| || || Sbjct 520407 AGTCGATTCCTTCTGAATGTTATAATCTGAAAGTGTGCGACCGTCTTCAAGCTGTTTTCC 520466 Query 210977 TGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCCTGGATCTTTTGTTT 211036 |||||||| | | || ||||| || || | ||||||||||||||| || ||| ||| Sbjct 520467 GGCGAAGATCAACCTCTGCTGGTCCGGGGGGATTCCTTCCTTGTCCTGAATTTTTGCTTT 520526 Query 211037 CACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTCTTTCCCGTGAGAGT 211096 |||||| || || ||||| || ||| || || |||||||| ||||| || ||||| || Sbjct 520527 CACGTTCTCAATCGTGTCCGACGCTTCGACTTCCAGAGTGATTGTCTTACCGGTGAGCGT 520586 Query 211097 CTTTACAAACACCTGCAT 211114 || ||||| | ||||| Sbjct 520587 TTTGACAAAAATTTGCAT 520604 Score = 129 bits (142), Expect = 1e-24 Identities = 161/221 (73%), Gaps = 0/221 (0%) Strand=Plus/Plus Query 210894 CGAAGTCTTAGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTC 210953 ||||| || | || | || || || || || || || ||||||||||| | ||| || Sbjct 519928 CGAAGCCTCAAAACCAAATGCAGGGTAGATTCCTTCTGAATGTTATAATCAGAAAGCGTA 519987 Query 210954 CTTCCATCTTCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCT 211013 | || ||||| ||||| || || || ||||| | | || || || ||||||| ||| Sbjct 519988 CGGCCGTCTTCGAGCTGTTTTCCGGCAAAGATCAACCTCTGCTGATCGGGAGGAATGCCT 520047 Query 211014 TCCTTGTCCTGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGA 211073 || || || || || || |||||||||||||| ||||| || |||||||| || Sbjct 520048 TCTTTATCTTGAATTTTCGCCTTCACGTTTTCGATCGTGTCCGAAGCCTCAACCTCCAGT 520107 Query 211074 GTGATCGTCTTTCCCGTGAGAGTCTTTACAAACACCTGCAT 211114 ||||| || || || ||||||||||| ||||| | |||||| Sbjct 520108 GTGATAGTTTTACCAGTGAGAGTCTTGACAAAAATCTGCAT 520148 Score = 107 bits (118), Expect = 4e-18 Identities = 157/222 (71%), Gaps = 0/222 (0%) Strand=Plus/Plus Query 210894 CGAAGTCTTAGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTC 210953 ||||| || | || | || || || || || || || ||||||||||| | ||| || Sbjct 520156 CGAAGCCTCAAAACTAAATGCAGGGTAGATTCCTTCTGAATGTTATAATCAGAAAGCGTA 520215 Query 210954 CTTCCATCTTCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCT 211013 | || ||||| ||||| || || || ||||| | | || || || ||||| | |||| Sbjct 520216 CGGCCGTCTTCGAGCTGTTTTCCGGCAAAGATCAACCTCTGCTGATCTGGAGGGATTCCT 520275 Query 211014 TCCTTGTCCTGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGA 211073 |||||||| || || || ||| || || ||||| ||||| || ||||| || | Sbjct 520276 TCCTTGTCTTGAATTTTGGCTTTGACATTCTCGATCGTGTCCGACGCCTCAACTTCCAAC 520335 Query 211074 GTGATCGTCTTTCCCGTGAGAGTCTTTACAAACACCTGCATT 211115 ||||| |||||||| || | ||||| || || | |||||| Sbjct 520336 GTGATGGTCTTTCCTGTTAATGTCTTGACGAAAATTTGCATT 520377 >seq4069 Length=1127261 Score = 154 bits (170), Expect = 3e-32 Identities = 148/190 (78%), Gaps = 0/190 (0%) Strand=Plus/Minus Query 210925 CTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCTTCCAGCTGCTTGCCTGCGAAGA 210984 |||||||||| |||||||| | || || | |||||| ||||| || ||||| ||||||| Sbjct 161737 CTTTTTGGATATTATAATCGGACAGAGTGCGTCCATCCTCCAGTTGTTTGCCGGCGAAGA 161678 Query 210985 TAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCCTGGATCTTTTGTTTCACGTTTT 211044 | || || ||||| || || |||| ||| ||||||||||||||||| || || || | Sbjct 161677 TGAGTCGCTGTTGATCTGGCGGAATTCCCTCCTTGTCCTGGATCTTGGCCTTGACATTCT 161618 Query 211045 CGATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTCTTTCCCGTGAGAGTCTTTACAA 211104 ||||||| || ||| || |||||||| ||||| || || |||||||| || || || | Sbjct 161617 CGATGGTATCGGAGGCCTCTACCTCGAGGGTGATGGTTTTACCCGTGAGGGTTTTCACGA 161558 Query 211105 ACACCTGCAT 211114 | | |||||| Sbjct 161557 AGATCTGCAT 161548 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1159083340891395