Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Trachymyrmex_20zeteki_20[refseq_20GCF_5F001594055.1_202016-03-31]
4,623 sequences; 267,973,152 total letters
Query= NC_029692.1
Length=362276
Score E
Sequences producing significant alignments: (Bits) Value
seq4552 179 9e-40
seq3876 179 9e-40
seq4069 154 3e-32
>seq4552
Length=86203
Score = 179 bits (198), Expect = 9e-40
Identities = 173/222 (78%), Gaps = 0/222 (0%)
Strand=Plus/Minus
Query 210894 CGAAGTCTTAGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTC 210953
||||| | || || || |||||||| || ||||| ||||||||||| || | || |||
Sbjct 3780 CGAAGACGCAGAACCAGATGAAGAGTAGATTCTTTCTGGATGTTATAGTCTGAGAGTGTC 3721
Query 210954 CTTCCATCTTCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCT 211013
|| || ||||||| ||| || || |||||||| | ||||| ||||||||||||| |||
Sbjct 3720 CTACCGTCTTCCAACTGTTTACCAGCGAAGATCAAACGTTGCTGGTCAGGAGGAATGCCT 3661
Query 211014 TCCTTGTCCTGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGA 211073
|| ||||| |||||||| ||| |||||||| || ||||||||| |||||| || ||
Sbjct 3660 TCTTTGTCTTGGATCTTAGCTTTTACGTTTTCTATTGTGTCAGAGGCTTCAACTTCAAGG 3601
Query 211074 GTGATCGTCTTTCCCGTGAGAGTCTTTACAAACACCTGCATT 211115
||||| || || || |||||||| || || || | ||||||
Sbjct 3600 GTGATGGTTTTACCGGTGAGAGTTTTCACGAAGATTTGCATT 3559
Score = 179 bits (198), Expect = 9e-40
Identities = 173/222 (78%), Gaps = 0/222 (0%)
Strand=Plus/Minus
Query 210894 CGAAGTCTTAGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTC 210953
||||| | || || || |||||||| || ||||| ||||||||||| || | || |||
Sbjct 4008 CGAAGACGCAGAACCAGATGAAGAGTAGATTCTTTCTGGATGTTATAGTCTGAGAGTGTC 3949
Query 210954 CTTCCATCTTCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCT 211013
|| || ||||||| ||| || || |||||||| | ||||| ||||||||||||| |||
Sbjct 3948 CTACCGTCTTCCAACTGTTTACCAGCGAAGATCAAACGTTGCTGGTCAGGAGGAATGCCT 3889
Query 211014 TCCTTGTCCTGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGA 211073
|| ||||| ||||| || ||| |||||||| || ||||||||| |||||| || |||
Sbjct 3888 TCTTTGTCTTGGATTTTAGCTTTTACGTTTTCTATTGTGTCAGAGGCTTCAACTTCAAGA 3829
Query 211074 GTGATCGTCTTTCCCGTGAGAGTCTTTACAAACACCTGCATT 211115
||||| || || || |||||||| || || || | ||||||
Sbjct 3828 GTGATGGTTTTACCGGTGAGAGTTTTCACGAAGATTTGCATT 3787
Score = 170 bits (188), Expect = 4e-37
Identities = 171/222 (77%), Gaps = 0/222 (0%)
Strand=Plus/Minus
Query 210894 CGAAGTCTTAGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTC 210953
||||||| || || | ||| || || || |||||||||||||| ||||| | ||| ||
Sbjct 4464 CGAAGTCGTAAAACTAAGTGGAGTGTAGATTCTTTTTGGATGTTGTAATCAGAAAGAGTT 4405
Query 210954 CTTCCATCTTCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCT 211013
|| || |||||||| |||||||| |||||||| | || ||||| || ||||| | ||||
Sbjct 4404 CTGCCGTCTTCCAGTTGCTTGCCAGCGAAGATTAAACGCTGTTGATCTGGAGGGATTCCT 4345
Query 211014 TCCTTGTCCTGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGA 211073
|| |||||||| || || ||||||||||| || ||||| || ||| || || |||
Sbjct 4344 TCTTTGTCCTGAATTTTGGCCTTCACGTTTTCAATAGTGTCTGAAGCTTCGACTTCAAGA 4285
Query 211074 GTGATCGTCTTTCCCGTGAGAGTCTTTACAAACACCTGCATT 211115
||||| || || || |||||||| || ||||| | ||||||
Sbjct 4284 GTGATGGTTTTACCTGTGAGAGTTTTCACAAAAATTTGCATT 4243
Score = 161 bits (178), Expect = 2e-34
Identities = 169/222 (76%), Gaps = 0/222 (0%)
Strand=Plus/Minus
Query 210894 CGAAGTCTTAGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTC 210953
||||| | || || | |||||| ||||| |||||||||||||| || || | ||| ||
Sbjct 4236 CGAAGACGCAGAACCAAGTGAAGTGTGGATTCTTTTTGGATGTTGTAGTCGGAAAGAGTT 4177
Query 210954 CTTCCATCTTCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCT 211013
|| ||||||||||| || || || |||||||| || || ||||| || || |||| |||
Sbjct 4176 CTGCCATCTTCCAGTTGTTTACCGGCGAAGATCAGACGCTGTTGATCCGGTGGAATTCCC 4117
Query 211014 TCCTTGTCCTGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGA 211073
|| ||||||||||| || || |||||||| |||||||| || ||| || |||||
Sbjct 4116 TCTTTGTCCTGGATTTTAGCCTTTACGTTTTCAATGGTGTCTGAAGCTTCGACTTCGAGG 4057
Query 211074 GTGATCGTCTTTCCCGTGAGAGTCTTTACAAACACCTGCATT 211115
|| || || || || |||||||| || || || | ||||||
Sbjct 4056 GTAATGGTTTTACCGGTGAGAGTTTTCACGAAGATTTGCATT 4015
>seq3876
Length=890137
Score = 179 bits (198), Expect = 9e-40
Identities = 171/219 (78%), Gaps = 0/219 (0%)
Strand=Plus/Plus
Query 210896 AAGTCTTAGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCT 210955
||||| || ||||||||||| || |||||||| || || ||||| || | | ||||
Sbjct 519702 AAGTCGAAGTACAAGGTGAAGTGTAGACTCTTTCTGAATATTATAGTCGGATAAAGTCCG 519761
Query 210956 TCCATCTTCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTC 211015
|||||| || ||||||||||| ||||| || || | |||||| || ||||||| |||||
Sbjct 519762 TCCATCCTCTAGCTGCTTGCCCGCGAAAATCAGTCTTTGTTGATCGGGAGGAATGCCTTC 519821
Query 211016 CTTGTCCTGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGT 211075
|| ||||| || || ||||||||||||||| ||||| || |||||||| || ||
Sbjct 519822 TTTATCCTGAATTTTCGCTTTCACGTTTTCGATCGTGTCCGAAGCCTCAACCTCCAGTGT 519881
Query 211076 GATCGTCTTTCCCGTGAGAGTCTTTACAAACACCTGCAT 211114
||| || || || ||||||||||| ||||| | ||||||
Sbjct 519882 GATAGTTTTACCAGTGAGAGTCTTGACAAAAATCTGCAT 519920
Score = 140 bits (154), Expect = 8e-28
Identities = 164/222 (74%), Gaps = 0/222 (0%)
Strand=Plus/Plus
Query 210893 ACGAAGTCTTAGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGT 210952
||| | ||| ||||| | || |||||||| || || || || || ||||| | | |||
Sbjct 521523 ACGCAATCTGAGGACCAAATGGAGAGTGGATTCCTTCTGAATATTGTAATCGGATAAGGT 521582
Query 210953 CCTTCCATCTTCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCC 211012
| ||| ||||| |||||||| || |||||||| | || || || || || || | ||
Sbjct 521583 ACGTCCGTCTTCAAGCTGCTTTCCAGCGAAGATCAAACGCTGCTGATCGGGTGGGATACC 521642
Query 211013 TTCCTTGTCCTGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAG 211072
|||||| || ||||||||| ||| || || |||||||||||||| |||||| || ||
Sbjct 521643 TTCCTTATCTTGGATCTTTGCTTTTACATTCTCGATGGTGTCAGAAGCTTCAACTTCAAG 521702
Query 211073 AGTGATCGTCTTTCCCGTGAGAGTCTTTACAAACACCTGCAT 211114
|| || ||||| || || | ||||| || || | ||||||
Sbjct 521703 GGTTATGGTCTTCCCGGTCAATGTCTTCACGAAAATCTGCAT 521744
Score = 138 bits (152), Expect = 3e-27
Identities = 163/221 (74%), Gaps = 0/221 (0%)
Strand=Plus/Plus
Query 210894 CGAAGTCTTAGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTC 210953
||||| |||| || | || | ||||| || ||||| ||||| || || | ||||||
Sbjct 520612 CGAAGCCTTAAAACCAAATGCAATGTGGATTCCTTTTGAATGTTGTAGTCAGAAAGGGTA 520671
Query 210954 CTTCCATCTTCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCT 211013
| |||||||| ||||| || || |||||||| | | || ||||| ||||| | ||||
Sbjct 520672 CGGCCATCTTCAAGCTGTTTTCCGGCGAAGATCAACCTCTGCTGGTCCGGAGGGATTCCT 520731
Query 211014 TCCTTGTCCTGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGA 211073
||||||||||| || ||| ||||||||| || || |||||||| ||||| || |
Sbjct 520732 TCCTTGTCCTGAATTTTTGCTTTCACGTTCTCAATCGTGTCAGATGCCTCAACTTCCAAT 520791
Query 211074 GTGATCGTCTTTCCCGTGAGAGTCTTTACAAACACCTGCAT 211114
||||| |||||||| || | || || || || | |||||
Sbjct 520792 GTGATGGTCTTTCCGGTCAATGTTTTGACGAAAATTTGCAT 520832
Score = 136 bits (150), Expect = 9e-27
Identities = 149/198 (75%), Gaps = 0/198 (0%)
Strand=Plus/Plus
Query 210917 AGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCTTCCAGCTGCTTGCC 210976
||| || || || || ||||||||||| | ||| || | || ||||| ||||| || ||
Sbjct 520407 AGTCGATTCCTTCTGAATGTTATAATCTGAAAGTGTGCGACCGTCTTCAAGCTGTTTTCC 520466
Query 210977 TGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCCTGGATCTTTTGTTT 211036
|||||||| | | || ||||| || || | ||||||||||||||| || ||| |||
Sbjct 520467 GGCGAAGATCAACCTCTGCTGGTCCGGGGGGATTCCTTCCTTGTCCTGAATTTTTGCTTT 520526
Query 211037 CACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTCTTTCCCGTGAGAGT 211096
|||||| || || ||||| || ||| || || |||||||| ||||| || ||||| ||
Sbjct 520527 CACGTTCTCAATCGTGTCCGACGCTTCGACTTCCAGAGTGATTGTCTTACCGGTGAGCGT 520586
Query 211097 CTTTACAAACACCTGCAT 211114
|| ||||| | |||||
Sbjct 520587 TTTGACAAAAATTTGCAT 520604
Score = 129 bits (142), Expect = 1e-24
Identities = 161/221 (73%), Gaps = 0/221 (0%)
Strand=Plus/Plus
Query 210894 CGAAGTCTTAGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTC 210953
||||| || | || | || || || || || || || ||||||||||| | ||| ||
Sbjct 519928 CGAAGCCTCAAAACCAAATGCAGGGTAGATTCCTTCTGAATGTTATAATCAGAAAGCGTA 519987
Query 210954 CTTCCATCTTCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCT 211013
| || ||||| ||||| || || || ||||| | | || || || ||||||| |||
Sbjct 519988 CGGCCGTCTTCGAGCTGTTTTCCGGCAAAGATCAACCTCTGCTGATCGGGAGGAATGCCT 520047
Query 211014 TCCTTGTCCTGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGA 211073
|| || || || || || |||||||||||||| ||||| || |||||||| ||
Sbjct 520048 TCTTTATCTTGAATTTTCGCCTTCACGTTTTCGATCGTGTCCGAAGCCTCAACCTCCAGT 520107
Query 211074 GTGATCGTCTTTCCCGTGAGAGTCTTTACAAACACCTGCAT 211114
||||| || || || ||||||||||| ||||| | ||||||
Sbjct 520108 GTGATAGTTTTACCAGTGAGAGTCTTGACAAAAATCTGCAT 520148
Score = 107 bits (118), Expect = 4e-18
Identities = 157/222 (71%), Gaps = 0/222 (0%)
Strand=Plus/Plus
Query 210894 CGAAGTCTTAGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTC 210953
||||| || | || | || || || || || || || ||||||||||| | ||| ||
Sbjct 520156 CGAAGCCTCAAAACTAAATGCAGGGTAGATTCCTTCTGAATGTTATAATCAGAAAGCGTA 520215
Query 210954 CTTCCATCTTCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCT 211013
| || ||||| ||||| || || || ||||| | | || || || ||||| | ||||
Sbjct 520216 CGGCCGTCTTCGAGCTGTTTTCCGGCAAAGATCAACCTCTGCTGATCTGGAGGGATTCCT 520275
Query 211014 TCCTTGTCCTGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGA 211073
|||||||| || || || ||| || || ||||| ||||| || ||||| || |
Sbjct 520276 TCCTTGTCTTGAATTTTGGCTTTGACATTCTCGATCGTGTCCGACGCCTCAACTTCCAAC 520335
Query 211074 GTGATCGTCTTTCCCGTGAGAGTCTTTACAAACACCTGCATT 211115
||||| |||||||| || | ||||| || || | ||||||
Sbjct 520336 GTGATGGTCTTTCCTGTTAATGTCTTGACGAAAATTTGCATT 520377
>seq4069
Length=1127261
Score = 154 bits (170), Expect = 3e-32
Identities = 148/190 (78%), Gaps = 0/190 (0%)
Strand=Plus/Minus
Query 210925 CTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCTTCCAGCTGCTTGCCTGCGAAGA 210984
|||||||||| |||||||| | || || | |||||| ||||| || ||||| |||||||
Sbjct 161737 CTTTTTGGATATTATAATCGGACAGAGTGCGTCCATCCTCCAGTTGTTTGCCGGCGAAGA 161678
Query 210985 TAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCCTGGATCTTTTGTTTCACGTTTT 211044
| || || ||||| || || |||| ||| ||||||||||||||||| || || || |
Sbjct 161677 TGAGTCGCTGTTGATCTGGCGGAATTCCCTCCTTGTCCTGGATCTTGGCCTTGACATTCT 161618
Query 211045 CGATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTCTTTCCCGTGAGAGTCTTTACAA 211104
||||||| || ||| || |||||||| ||||| || || |||||||| || || || |
Sbjct 161617 CGATGGTATCGGAGGCCTCTACCTCGAGGGTGATGGTTTTACCCGTGAGGGTTTTCACGA 161558
Query 211105 ACACCTGCAT 211114
| | ||||||
Sbjct 161557 AGATCTGCAT 161548
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1159083340891395
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