Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Trachymyrmex_20zeteki_20[refseq_20GCF_5F001594055.1_202016-03-31] 4,623 sequences; 267,973,152 total letters Query= NC_031033.1 Length=217124 Score E Sequences producing significant alignments: (Bits) Value seq4212 125 1e-23 seq3537 118 1e-21 seq3783 91.5 2e-13 >seq4212 Length=4365329 Score = 125 bits (138), Expect = 1e-23 Identities = 195/276 (71%), Gaps = 2/276 (1%) Strand=Plus/Minus Query 78370 GAAAACAGCTAGACATTTGATGATGAACAGTTCCTGCATTAAATAATGTCGGAGATGCAT 78429 |||| | || ||||| || || | | ||| | |||||||||| ||||| || |||| Sbjct 3414560 GAAATTACCTGGACATCTGCTGGTTATTAGTACAGGCATTAAATAGAGTCGGTGAAGCAT 3414501 Query 78430 GCGTAAACCATTTTTCAGA-AAGTAGATTGTATGTTTCAATAGCTGATTCTATGTCCCAT 78488 | ||||| || ||| || || || ||| |||||||| || || || ||||| | Sbjct 3414500 GTGTAAAATATCGTTCGGACAAATA-ATTATATGTTTCTATGACTTTGTCAATGTCATTT 3414442 Query 78489 TGATGAATTCCTACCGCTACACGCATCAACATATGCTGAGGTCTTTCAACCGTCTTATTA 78548 | |||||| || | ||||| | |||||||||||| ||||| || || || ||||| Sbjct 3414441 TCATGAATACCAATAGCTACTCTCATCAACATATGTTGAGGCCTCTCGACTATCTTACCG 3414382 Query 78549 TTTATTTTCAACAAGTATGATTTTTCCAAAGTTTTAAAACCAAAATAGTTGTATGAAAAG 78608 || ||||| | || ||| | | || | ||||||||||||| ||| || || ||| Sbjct 3414381 TTGATTTTTAGCAGGTAACTTCTCTCAAGCGTTTTAAAACCAATATAATTATAATTGAAG 3414322 Query 78609 TCTCTCTCGTAAATAATAACAGAATTTAGTTTATCT 78644 || | ||||| || ||| |||||| ||||| ||| Sbjct 3414321 TCACGATCGTATATTATAGCAGAATCCAGTTTCTCT 3414286 Score = 105 bits (116), Expect = 9e-18 Identities = 216/317 (68%), Gaps = 8/317 (3%) Strand=Plus/Minus Query 77524 TACCAATAGGTCTATGTCTCTTATTGGAAATTTTAGCTTCTGGAATAGGATAATAATTAA 77583 ||||||||||||| ||| | ||| || |||| | |||| ||||||||| | |||| Sbjct 3415685 TACCAATAGGTCTGTGTTTACGATTAGATGTTTTCGTTTCTTCGATAGGATAAAAGTTAA 3415626 Query 77584 TGTCTATAATTTTATTGAGATTTCTAACAACTACTTTAACCACGTCCTTTAGTTTAAGAA 77643 ||| || | ||||| ||||| | | ||| ||||| | || || |||||| | Sbjct 3415625 CGTCAATGACTTTATCTAGATTACGAGTAACGACTTTCGCGACTGTTTTAAGTTTATCGA 3415566 Query 77644 AATCAAA---TCTTCCATCTA---TAACAAACATGTTCAAAGCTATAGATGCTAGATTAC 77697 |||| || | | |||| |||| |||||||| | ||| |||||||||| ||| | Sbjct 3415565 AATCGAAAGTTTTGGTGTCTATATTAACGAACATGTTGACAGCGATAGATGCTAAATTGC 3415506 Query 77698 AAACTGCTACCTCATTAGCGTTGGCATATTGTATTATCTCGGTACATAGATTACTACATT 77757 | || || || || || | |||| || || ||||| || | || || |||| Sbjct 3415505 ATACAGCGACTTCTCCAGGACCAGAGTATTCAATAATTTCGGTGCACAAGTTGCTGCATT 3415446 Query 77758 TGATAGTGCCCAGATTTTGTTGGTTGCTCTTTTTATTGC-ATGAGTCCTTATAAAGAATA 77816 |||||||||| | || || || || ||| ||||| |||| || || ||||| ||| Sbjct 3415445 TGATAGTGCCTATATGCTGATGATTTGATTTTCGATTGCAATGA-TCTTTGTAAAGCATA 3415387 Query 77817 AACGGAGTCCCGGTTTC 77833 | || || || ||||| Sbjct 3415386 TAAGGTGTTCCAGTTTC 3415370 Score = 96.9 bits (106), Expect = 5e-15 Identities = 91/116 (78%), Gaps = 0/116 (0%) Strand=Plus/Minus Query 78744 CTAAATAGtttttttGTTTCCTTGTGTAGATTAGATACAGCTATTCTTGCAGCTAGAATA 78803 ||||| ||| || |||||||||||||| ||||| || | |||||||||||||| ||| Sbjct 3414070 CTAAAACTTTTCTTGGTTTCCTTGTGTAGGTTAGACACGTCAATTCTTGCAGCTAGTATA 3414011 Query 78804 GCATAATCAGGATGTTGTGTAGTACAAGTGGCTGCTATTTCTGCCGCTAAAATATC 78859 |||||||||||||||| || | || ||||| |||| || |||||| |||| Sbjct 3414010 GCATAATCAGGATGTTTAGTTGCCATTGTAGCTGCAGTTTCAGCTGCTAAATTATC 3413955 Score = 93.3 bits (102), Expect = 6e-14 Identities = 104/139 (75%), Gaps = 0/139 (0%) Strand=Plus/Minus Query 77095 TTAAAACTCTAAGGAGATGAGGATTAACTATTTGAAATTCTCCAGACAATACTCTACGAG 77154 ||||| ||| || | ||| ||||| || || ||||||||| |||||||| | | Sbjct 3416264 TTAAATCTCGCAGTAAATGCGGATTGACAATGATAAATTCTCCCGACAATACACGCCTCA 3416205 Query 77155 TGTAAATATTACTGGTATATGGTTCCACAGATTCATTGTTTCCCAAAATTTGAGCAGTAG 77214 || ||||| || ||||||||||| | |||||| || || || ||||| || || || | Sbjct 3416204 CATAGATATTGCTTGTATATGGTTCAATAGATTCGTTATTCCCTAAAATCTGTGCTGTCG 3416145 Query 77215 AAGCAGTTGGCATAGGTGC 77233 | || |||||||||||||| Sbjct 3416144 AGGCCGTTGGCATAGGTGC 3416126 Score = 84.2 bits (92), Expect = 3e-11 Identities = 99/131 (76%), Gaps = 6/131 (5%) Strand=Plus/Minus Query 77924 TTCAAATTCATCTCCCCAAACATCATCCAATCCAGGGCATTCATTTGGGCACATCAATGA 77983 || ||||||||| |||||||||||| | || || || |||||| ||| ||||| || Sbjct 3415187 TTTAAATTCATCACCCCAAACATCAGCTAAGCCGGGAGATTCATATGGACACATTAAGCT 3415128 Query 77984 CCAGTCACCATCTTCCTTA---ACTCGTTTCATAAAGAGATCAGGTATCCATAGAGCAAT 78040 ||| || | || || ||| || |||| |||||| ||||| |||||||||||| || Sbjct 3415127 CCA--CATC-TCGTCATTATATACACGTTCCATAAAAAGATCTGGTATCCATAGACCATA 3415071 Query 78041 AAATAGATCTC 78051 ||||| |||| Sbjct 3415070 AAATAAGTCTC 3415060 >seq3537 Length=3457499 Score = 118 bits (130), Expect = 1e-21 Identities = 161/222 (73%), Gaps = 7/222 (3%) Strand=Plus/Minus Query 48411 TAAGTATCTATTA--AAAGACTATACATTTCGGAGTGAATATTTTCAATTGCCATCTGAA 48468 ||||| || || | ||||| |||||| || || ||||||||||| || || || |||| Sbjct 3064182 TAAGTTTCAATGAGCAAAGA--ATACATCTCAGAATGAATATTTTCTATGGCAATTTGAA 3064125 Query 48469 ATCCGTAAAAACATCTCGCTTCTGTGATCTGTACCTCCGTACAAAATCGTTCAGCCAAAT 48528 | || || ||||| | ||||| | || | |||||| || |||| ||| || || Sbjct 3064124 AGCCATAGAAACAACGTGCTTCGGGAATTTTCACCTCCTGACTGAATCTCTCAATCAGAT 3064065 Query 48529 TCTCATTTACTATTCCATCACTAGCAGCAAAAAATGCTAATACATGTTTAATAAAATATT 48588 | ||||| || || |||||| ||| ||||| |||||||| ||||| ||||| |||| Sbjct 3064064 TTTCATTAACGATACCATCAGAAGCGGCAAAGAATGCTAAGACATGAGAGATAAAGTATT 3064005 Query 48589 TTTCGTTGGAAGTCAG---TTTATTCCAGTCATTGATATCTT 48627 | |||| |||| | || || ||||||||| || | |||| Sbjct 3064004 TCTCGTCGGAATTTAGCTTTTCATTCCAGTCCTTCTTGTCTT 3063963 Score = 84.2 bits (92), Expect = 3e-11 Identities = 157/228 (69%), Gaps = 11/228 (5%) Strand=Plus/Minus Query 47937 TTATAAAtt---tttttAAATCCTAATTCTGAAATCAGTCTATCTGCAACGAATTCTATA 47993 ||||| ||| |||| |||||||||| | | | ||| || || |||||||| || Sbjct 3065579 TTATACATTACCTTTTCAAATCCTAATGCAACGAATAATCTGTCCGCGACGAATTCGATG 3065520 Query 47994 TATCTTTTCATCATTTCACAATTCATTCCTATAAGTTTAACTGGTAGAGCCTCCGTAAGA 48053 ||| | |||| ||| |||||||||||||| |||| ||| |||| || | ||| | | Sbjct 3065519 TATTTACACATCCATTCGCAATTCATTCCTATCAGTTCAACCGGTAACGCTTGCGTCAAA 3065460 Query 48054 AACTCTTGTTCGATAGTGACAGCATCCACTATTATCGATGTTAC-CGTTTCCTCACTTGG 48112 || || | ||| || || ||||||| || || ||| | || || |||| || Sbjct 3065459 AATTCCTTTTCAATTTCTACGGCATCCATTACAATTGATTTCACACG----CTCAAATGA 3065404 Query 48113 TGG---ATACAACAAATGTTTAAACATTAAACATGCAAAATCACAATG 48157 ||| | | | ||||||||||||||||| || ||||| || || Sbjct 3065403 TGGCTTTTGTACGATGTGTTTAAACATTAAACAGGCGAAATCGCAGTG 3065356 >seq3783 Length=2569584 Score = 91.5 bits (100), Expect = 2e-13 Identities = 104/140 (74%), Gaps = 0/140 (0%) Strand=Plus/Plus Query 78742 CACTAAATAGtttttttGTTTCCTTGTGTAGATTAGATACAGCTATTCTTGCAGCTAGAA 78801 || |||| | || ||||| |||||||||||||| |||| ||| ||||| || |||| Sbjct 868872 CATTAAAAACTTCCTTTGTCTCCTTGTGTAGATTGGATATAGCAATTCTAGCTGCTAAGG 868931 Query 78802 TAGCATAATCAGGATGTTGTGTAGTACAAGTGGCTGCTATTTCTGCCGCTAAAATATCTA 78861 | |||||||| |||||||| | | ||| ||||| |||| || |||| | |||||| Sbjct 868932 TTGCATAATCTGGATGTTGATTGATCATAGTCGCTGCAGTTTCAGCTGCTAGATTATCTA 868991 Query 78862 ACTCTATAGTTGTGACCCCA 78881 | || | ||||| || ||| Sbjct 868992 ATTCGGTTGTTGTTACTCCA 869011 Score = 84.2 bits (92), Expect = 3e-11 Identities = 123/173 (71%), Gaps = 6/173 (3%) Strand=Plus/Plus Query 77358 CCATTATATGTTTCATAAGGTCCTTCTGTTTCAG---CTAGTTCACAACTCGCTTCCAAT 77414 || ||||||| |||||||| |||| |||||| ||| ||| ||||| ||||| | Sbjct 867101 CCCTTATATGACTCATAAGGACCTT---TTTCAGTAGCTATTTCGCAACTAGCTTCTAGA 867157 Query 77415 GCTCCGTAATAAATTGTTTCGAAAATCTTCTTATTGAGATCTTGTGCTTCAATACTATCA 77474 || || ||||| | || || ||||| | ||||| || | ||||| | || ||| Sbjct 867158 GCGCCATAATAGAGAGTCTCAAAAATTTGAACGTTGAGTTCATTAGCTTCTTTGCTTTCA 867217 Query 77475 AACGGATAATGTAAAAGAATAAAGGCATCTGCTAATCCCTGAACTCCAATACC 77527 || || || | | |||||| |||||||||||||| || || |||||||| Sbjct 867218 AATGGGTATCTCATTAAAATAAATGCATCTGCTAATCCTTGTACACCAATACC 867270 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 694628656826720