Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Trachymyrmex_20zeteki_20[refseq_20GCF_5F001594055.1_202016-03-31] 4,623 sequences; 267,973,152 total letters Query= NC_032111.1 Length=163005 Score E Sequences producing significant alignments: (Bits) Value seq3537 111 2e-19 >seq3537 Length=3457499 Score = 111 bits (122), Expect = 2e-19 Identities = 134/181 (74%), Gaps = 1/181 (1%) Strand=Plus/Minus Query 23761 TTTTCTTCATTATCTGTTATATATGTATCAATTAGTAAACTATACATTTCAGAATGAATA 23820 ||||||| ||| | ||||| || ||||| || ||| |||||| |||||||||||| Sbjct 3064203 TTTTCTTTTGGATCAGAAATATAAGTTTCAATGAGCAAAGAATACATCTCAGAATGAATA 3064144 Query 23821 TTTTCAATAGCAATCTGAAACCCATAAAAACATCTAGCTTCAGACAATTGAACATCATTA 23880 ||||| || ||||| ||||| ||||| ||||| | ||||| | | || || || | | Sbjct 3064143 TTTTCTATGGCAATTTGAAAGCCATAGAAACAACGTGCTTCGGGAATTTTCACCTCCTGA 3064084 Query 23881 AAAAATCTTTTAGCTAAATTTTCGTTAACAATACCATCACTAGCAGCAAAGAAAGC-AAG 23939 ||||| | | | |||||| ||||| ||||||||| ||| |||||||| || ||| Sbjct 3064083 CTGAATCTCTCAATCAGATTTTCATTAACGATACCATCAGAAGCGGCAAAGAATGCTAAG 3064024 Query 23940 A 23940 | Sbjct 3064023 A 3064023 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 521457864512200