Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Trachymyrmex_20zeteki_20[refseq_20GCF_5F001594055.1_202016-03-31]
4,623 sequences; 267,973,152 total letters
Query= NC_032255.1
Length=112536
Score E
Sequences producing significant alignments: (Bits) Value
seq4552 129 4e-25
seq3876 114 9e-21
seq4069 107 1e-18
>seq4552
Length=86203
Score = 129 bits (142), Expect = 4e-25
Identities = 161/216 (75%), Gaps = 6/216 (3%)
Strand=Plus/Minus
Query 44129 ACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGGCGAGTTGGCGCT--CGTCGT 44186
|| || ||||| || ||||| |||||||||||||||| || || || | || |
Sbjct 3312 ACAAGATGAAGTGTAGATTCCTTCTGGATGTTGTAATCGGAAAG--GGTTCTGCCATCCT 3255
Query 44187 CCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTCCG 44246
| || ||||| || |||||||| ||||| |||||||||| ||| | |||||| || ||
Sbjct 3254 CTAGTTGCTTTCCAGCAAAGATTAAACGTTGCTGATCTGGAGGAATACCTTCTTTGTCTT 3195
Query 44247 TTATCTTCTGCTTCAATGTTC-CTATGGTGTCGGCGGATTCCACCTCCACCGTAATCGTC 44305
||||| |||| | |||| |||| ||||| | | ||||||||| | || || ||
Sbjct 3194 GGATCTT-AGCTTTGACGTTCTCTATAGTGTCAGAAGCTTCCACCTCAAGGGTGATGGTT 3136
Query 44306 TTTCCCGTGAGGGTCTTCACGAAGATTTGCATGATG 44341
|| || |||||||| || || |||||||||||||||
Sbjct 3135 TTCCCAGTGAGGGTTTTTACAAAGATTTGCATGATG 3100
Score = 114 bits (126), Expect = 9e-21
Identities = 169/236 (72%), Gaps = 4/236 (2%)
Strand=Plus/Minus
Query 44104 TTTCATTCCCCCTCTCAGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTA 44163
|| |||||| |||| || | || |||| |||||| ||| || ||||||||||||||
Sbjct 4249 TTGCATTCCTCCTCGAAGACGCAGAACCAAGTGAAGTGTGGATTCTTTTTGGATGTTGTA 4190
Query 44164 ATCGGC--GAGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGA 44221
|||| ||||| || | || ||||| || || ||||| ||||||| |||||| |||
Sbjct 4189 GTCGGAAAGAGTTCT-GC-CATCTTCCAGTTGTTTACCGGCGAAGATCAGACGCTGTTGA 4132
Query 44222 TCTGAAGGCACACCTTCCTTTTCCGTTATCTTCTGCTTCAATGTTCCTATGGTGTCGGCG 44281
|| | || | || || || ||| || || ||| | || | |||||||| |
Sbjct 4131 TCCGGTGGAATTCCCTCTTTGTCCTGGATTTTAGCCTTTACGTTTTCAATGGTGTCTGAA 4072
Query 44282 GATTCCACCTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCACGAAGATTTGCAT 44337
| ||| || || | ||||| || || || ||||| || |||||||||||||||||
Sbjct 4071 GCTTCGACTTCGAGGGTAATGGTTTTACCGGTGAGAGTTTTCACGAAGATTTGCAT 4016
Score = 111 bits (122), Expect = 1e-19
Identities = 167/235 (71%), Gaps = 2/235 (1%)
Strand=Plus/Minus
Query 44104 TTTCATTCCCCCTCTCAGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTA 44163
|| |||||| |||| || | || ||||| ||||| || || || |||||||| ||
Sbjct 3793 TTGCATTCCTCCTCGAAGACGCAGAACCAGATGAAGAGTAGATTCTTTCTGGATGTTATA 3734
Query 44164 ATCGGCGAGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATC 44223
|| | |||| | |||| |||| ||| || || || ||||||||||| ||||| ||
Sbjct 3733 GTCTGAGAGTGTCCTACCGTCTTCCAACTGTTTACCAGCGAAGATCAAACGTTGCTGGTC 3674
Query 44224 TGAAGGCACACCTTCCTTTTCCGTTATCTTCTGCTTCAATGTTC-CTATGGTGTCGGCGG 44282
| ||| | ||||| || || ||||| |||| | ||| |||| ||||| | ||
Sbjct 3673 AGGAGGAATGCCTTCTTTGTCTTGGATCTTA-GCTTTTACGTTTTCTATTGTGTCAGAGG 3615
Query 44283 ATTCCACCTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCACGAAGATTTGCAT 44337
||| || || | || || || || || ||||| || |||||||||||||||||
Sbjct 3614 CTTCAACTTCAAGGGTGATGGTTTTACCGGTGAGAGTTTTCACGAAGATTTGCAT 3560
Score = 105 bits (116), Expect = 5e-18
Identities = 166/235 (71%), Gaps = 2/235 (1%)
Strand=Plus/Minus
Query 44104 TTTCATTCCCCCTCTCAGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTA 44163
|| |||||| |||| || | || ||||| ||||| || || || |||||||| ||
Sbjct 4021 TTGCATTCCTCCTCGAAGACGCAGAACCAGATGAAGAGTAGATTCTTTCTGGATGTTATA 3962
Query 44164 ATCGGCGAGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATC 44223
|| | |||| | |||| |||| ||| || || || ||||||||||| ||||| ||
Sbjct 3961 GTCTGAGAGTGTCCTACCGTCTTCCAACTGTTTACCAGCGAAGATCAAACGTTGCTGGTC 3902
Query 44224 TGAAGGCACACCTTCCTTTTCCGTTATCTTCTGCTTCAATG-TTCCTATGGTGTCGGCGG 44282
| ||| | ||||| || || || || |||| | | || |||| ||||| | ||
Sbjct 3901 AGGAGGAATGCCTTCTTTGTCTTGGAT-TTTAGCTTTTACGTTTTCTATTGTGTCAGAGG 3843
Query 44283 ATTCCACCTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCACGAAGATTTGCAT 44337
||| || || | || || || || || ||||| || |||||||||||||||||
Sbjct 3842 CTTCAACTTCAAGAGTGATGGTTTTACCGGTGAGAGTTTTCACGAAGATTTGCAT 3788
Score = 100 bits (110), Expect = 2e-16
Identities = 139/193 (72%), Gaps = 4/193 (2%)
Strand=Plus/Minus
Query 44147 TCCTTTTGGATGTTGTAATCGG--CGAGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAA 44204
|| ||||||||||||||||| | ||||| | |||| ||||| ||||| || || |
Sbjct 4434 TCTTTTTGGATGTTGTAATCAGAAAGAGTT--CTGCCGTCTTCCAGTTGCTTGCCAGCGA 4377
Query 44205 AGATCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTCCGTTATCTTCTGCTTCAATG 44264
|||| |||||||| ||||||| ||| | ||||| || ||| || || |||||
Sbjct 4376 AGATTAAACGCTGTTGATCTGGAGGGATTCCTTCTTTGTCCTGAATTTTGGCCTTCACGT 4317
Query 44265 TTCCTATGGTGTCGGCGGATTCCACCTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCA 44324
|| | || ||||| | | ||| || || | || || || || || ||||| || ||||
Sbjct 4316 TTTCAATAGTGTCTGAAGCTTCGACTTCAAGAGTGATGGTTTTACCTGTGAGAGTTTTCA 4257
Query 44325 CGAAGATTTGCAT 44337
| || ||||||||
Sbjct 4256 CAAAAATTTGCAT 4244
Score = 82.4 bits (90), Expect = 5e-11
Identities = 159/235 (68%), Gaps = 0/235 (0%)
Strand=Plus/Minus
Query 44104 TTTCATTCCCCCTCTCAGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTA 44163
|| |||||| |||| || | || ||||| ||||| ||| || ||||| || || ||
Sbjct 3565 TTGCATTCCTCCTCGAAGACGCAGAACCAGATGAAGTGTGGATTCTTTTTGAATATTATA 3506
Query 44164 ATCGGCGAGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATC 44223
||| | ||| | | || || || || || || ||||| |||| ||||||||||||
Sbjct 3505 ATCAGAGAGAGTTCTGCCATCTTCAAGTTGTTTGCCAGCAAAAATCAGACGCTGCTGATC 3446
Query 44224 TGAAGGCACACCTTCCTTTTCCGTTATCTTCTGCTTCAATGTTCCTATGGTGTCGGCGGA 44283
| || | || || || || || || |||| || | || ||||| | |
Sbjct 3445 CGGGGGAATTCCCTCTTTGTCTTGGATTTTGGCTTTCACATTTTCAATAGTGTCTGAAGC 3386
Query 44284 TTCCACCTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCACGAAGATTTGCATG 44338
||| || || | || || || || ||||| || |||||||| ||||| ||||||
Sbjct 3385 TTCGACTTCGAGGGTGATGGTTTTACCCGTAAGAGTCTTCACAAAGATCTGCATG 3331
>seq3876
Length=890137
Score = 114 bits (126), Expect = 9e-21
Identities = 166/232 (72%), Gaps = 2/232 (1%)
Strand=Plus/Plus
Query 44107 CATTCCCCCTCTCAGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATC 44166
|||||| || | || ||| | |||| || || ||| ||||| || || ||||||||
Sbjct 521514 CATTCCACCACGCAATCTGAGGACCAAATGGAGAGTGGATTCCTTCTGAATATTGTAATC 521573
Query 44167 GGCGAGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGA 44226
|| | || |||| || |||||||| || || |||||||||||||||||||| |
Sbjct 521574 GGATAAGGTACGTCCGTCTTCAAGCTGCTTTCCAGCGAAGATCAAACGCTGCTGATCGGG 521633
Query 44227 AGGCACACCTTCCTTTTCCGTTATCTTCTGCTTCAATGTTC-CTATGGTGTCGGCGGATT 44285
|| | ||||||||| || ||||| ||||| | ||| | |||||||| | | ||
Sbjct 521634 TGGGATACCTTCCTTATCTTGGATCTT-TGCTTTTACATTCTCGATGGTGTCAGAAGCTT 521692
Query 44286 CCACCTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCACGAAGATTTGCAT 44337
| || || | || || ||||| || || | ||||||||||| || |||||
Sbjct 521693 CAACTTCAAGGGTTATGGTCTTCCCGGTCAATGTCTTCACGAAAATCTGCAT 521744
Score = 100 bits (110), Expect = 2e-16
Identities = 139/192 (72%), Gaps = 2/192 (1%)
Strand=Plus/Plus
Query 44147 TCCTTTTGGATGTTGTAATCGGCGAGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAAG 44206
||||| || ||||| ||||| | || || |||| || ||||| || |||||||||
Sbjct 520186 TCCTTCTGAATGTTATAATCAGAAAGCGTACGGCCGTCTTCGAGCTGTTTTCCGGCAAAG 520245
Query 44207 ATCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTCCGTTATCTTCTGCTTCAATGTT 44266
||||| | ||||||||||| ||| | |||||||| | | | | || |||| | ||
Sbjct 520246 ATCAACCTCTGCTGATCTGGAGGGATTCCTTCCTTGT-CTTGAATTTTGGCTTTGACATT 520304
Query 44267 C-CTATGGTGTCGGCGGATTCCACCTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCAC 44325
| | || ||||| | | || || |||| ||| || |||||||| || | ||||| ||
Sbjct 520305 CTCGATCGTGTCCGACGCCTCAACTTCCAACGTGATGGTCTTTCCTGTTAATGTCTTGAC 520364
Query 44326 GAAGATTTGCAT 44337
||| ||||||||
Sbjct 520365 GAAAATTTGCAT 520376
Score = 96.9 bits (106), Expect = 2e-15
Identities = 160/231 (69%), Gaps = 0/231 (0%)
Strand=Plus/Plus
Query 44107 CATTCCCCCTCTCAGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATC 44166
||| || || | || ||||| |||| || || || ||||| || ||||| |||||
Sbjct 519918 CATACCGCCGCGAAGCCTCAAAACCAAATGCAGGGTAGATTCCTTCTGAATGTTATAATC 519977
Query 44167 GGCGAGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGA 44226
| || || |||| || ||||| || |||||||||||||| | ||||||||| |
Sbjct 519978 AGAAAGCGTACGGCCGTCTTCGAGCTGTTTTCCGGCAAAGATCAACCTCTGCTGATCGGG 520037
Query 44227 AGGCACACCTTCCTTTTCCGTTATCTTCTGCTTCAATGTTCCTATGGTGTCGGCGGATTC 44286
||| | ||||| || || || ||| ||||| || | || ||||| | | ||
Sbjct 520038 AGGAATGCCTTCTTTATCTTGAATTTTCGCCTTCACGTTTTCGATCGTGTCCGAAGCCTC 520097
Query 44287 CACCTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCACGAAGATTTGCAT 44337
||||||| || || || || || ||||| ||||| || || || |||||
Sbjct 520098 AACCTCCAGTGTGATAGTTTTACCAGTGAGAGTCTTGACAAAAATCTGCAT 520148
Score = 84.2 bits (92), Expect = 2e-11
Identities = 146/210 (70%), Gaps = 2/210 (1%)
Strand=Plus/Plus
Query 44129 ACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGGCGAGTTGGCGCTCGTCGTCC 44188
|||| || || ||| || ||||| |||||||| || | || ||| | || ||
Sbjct 521080 ACCAAATGCAGTGTGGATTCTTTTTGAATGTTGTAGTCAGAAAGAGTGCGGCCATCTTCA 521139
Query 44189 AGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTCCGTT 44248
||||| || ||||| |||||||| | ||||||||||| ||| | |||| |||| | |
Sbjct 521140 AGCTGTTTTCCGGCGAAGATCAATCTCTGCTGATCTGGAGGGATTCCTT-CTTTGTCTTG 521198
Query 44249 ATCTTCTGC-TTCAATGTTCCTATGGTGTCGGCGGATTCCACCTCCACCGTAATCGTCTT 44307
| || ||| || | || | || ||||| | | || || |||| ||| || || ||
Sbjct 521199 AATTTTTGCTTTGACATTTTCGATCGTGTCAGATGCCTCGACTTCCAACGTGATGGTTTT 521258
Query 44308 TCCCGTGAGGGTCTTCACGAAGATTTGCAT 44337
||| || | || || ||||| ||||||||
Sbjct 521259 TCCGGTCAATGTTTTGACGAAAATTTGCAT 521288
Score = 84.2 bits (92), Expect = 2e-11
Identities = 146/210 (70%), Gaps = 2/210 (1%)
Strand=Plus/Plus
Query 44129 ACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGGCGAGTTGGCGCTCGTCGTCC 44188
|||| || || ||| || ||||| |||||||| || | || ||| | || ||
Sbjct 521308 ACCAAATGCAGTGTGGATTCTTTTTGAATGTTGTAGTCAGAAAGAGTGCGGCCATCTTCA 521367
Query 44189 AGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTCCGTT 44248
||||| || ||||| || ||||| | ||||||||||| ||| | |||| |||| | |
Sbjct 521368 AGCTGTTTTCCGGCGAAAATCAATCTCTGCTGATCTGGAGGGATTCCTT-CTTTGTCTTG 521426
Query 44249 ATCTTCTGC-TTCAATGTTCCTATGGTGTCGGCGGATTCCACCTCCACCGTAATCGTCTT 44307
| || ||| || | || | || ||||| | | || || |||| ||| || || ||
Sbjct 521427 AATTTTTGCTTTGACATTTTCGATCGTGTCAGATGCCTCGACTTCCAACGTGATGGTTTT 521486
Query 44308 TCCCGTGAGGGTCTTCACGAAGATTTGCAT 44337
||| || ||||| || || ||||| |||||
Sbjct 521487 TCCTGTCAGGGTTTTGACAAAGATCTGCAT 521516
>seq4069
Length=1127261
Score = 107 bits (118), Expect = 1e-18
Identities = 139/192 (72%), Gaps = 0/192 (0%)
Strand=Plus/Minus
Query 44150 TTTTGGATGTTGTAATCGGCGAGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAAGATC 44209
|||||||| || ||||||| || ||| | || ||||| || || ||||| |||||
Sbjct 161735 TTTTGGATATTATAATCGGACAGAGTGCGTCCATCCTCCAGTTGTTTGCCGGCGAAGATG 161676
Query 44210 AAACGCTGCTGATCTGAAGGCACACCTTCCTTTTCCGTTATCTTCTGCTTCAATGTTCCT 44269
| ||||| ||||||| || | || ||||| ||| ||||| ||| | | |
Sbjct 161675 AGTCGCTGTTGATCTGGCGGAATTCCCTCCTTGTCCTGGATCTTGGCCTTGACATTCTCG 161616
Query 44270 ATGGTGTCGGCGGATTCCACCTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCACGAAG 44329
||||| |||| || || ||||| | || || || || ||||||||||| |||||||||
Sbjct 161615 ATGGTATCGGAGGCCTCTACCTCGAGGGTGATGGTTTTACCCGTGAGGGTTTTCACGAAG 161556
Query 44330 ATTTGCATGATG 44341
|| |||||||||
Sbjct 161555 ATCTGCATGATG 161544
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 359970117128391
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