Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Trachymyrmex_20zeteki_20[refseq_20GCF_5F001594055.1_202016-03-31] 4,623 sequences; 267,973,152 total letters Query= NC_033775.1 Length=376207 Score E Sequences producing significant alignments: (Bits) Value seq4552 192 1e-43 seq3876 185 2e-41 seq4069 170 5e-37 >seq4552 Length=86203 Score = 192 bits (212), Expect = 1e-43 Identities = 168/208 (81%), Gaps = 1/208 (0%) Strand=Plus/Plus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983 ||||| ||||||||||||||||| || ||||| || |||||||| || ||| |||||| Sbjct 4019 CAAATCTTCGTGAAAACTCTCACCGGTAAAACCATTACCCTCGAAGTCGAAGCTTCAGAC 4078 Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043 ||||| || ||||| || || || ||||||||||| ||||| || ||||| || || Sbjct 4079 ACCATTGAAAACGTAAAGGCTAAAATCCAGGACAAAGAGGGAATTCCACCGGATCAACAG 4138 Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103 || || ||||||||||| ||||| || |||||||| || |||||| |||| || ||| || Sbjct 4139 CGTCTGATCTTCGCCGGTAAACAACTGGAAGATGGCAGAACTCTTTCCGACTACAACATC 4198 Query 178104 CAAAAAGAATCAACACTGCATCTTGTTT 178131 ||||||||||| ||||| || |||| || Sbjct 4199 CAAAAAGAATCCACACTTCA-CTTGGTT 4225 Score = 185 bits (204), Expect = 2e-41 Identities = 167/210 (80%), Gaps = 0/210 (0%) Strand=Plus/Plus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983 ||||| || || ||||| ||||| || ||||| |||||||| ||||||||| || ||| Sbjct 3107 CAAATCTTTGTAAAAACCCTCACTGGGAAAACCATCACCCTTGAGGTGGAAGCTTCTGAC 3166 Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043 || || |||||||||||| ||||| || ||||||||||| || ||||| || |||||| Sbjct 3167 ACTATAGAGAACGTCAAAGCTAAGATCCAAGACAAAGAAGGTATTCCTCCAGATCAGCAA 3226 Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103 || | ||||| || ||||| || || || ||||| || || ||| ||||||| ||| || Sbjct 3227 CGTTTAATCTTTGCTGGAAAGCAACTAGAGGATGGCAGAACCCTTTCCGATTACAACATC 3286 Query 178104 CAAAAAGAATCAACACTGCATCTTGTTTTG 178133 || || ||||| ||||| ||||||||| || Sbjct 3287 CAGAAGGAATCTACACTTCATCTTGTTCTG 3316 Score = 185 bits (204), Expect = 2e-41 Identities = 167/210 (80%), Gaps = 0/210 (0%) Strand=Plus/Plus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983 ||||| ||||||||||||||||| || ||||| |||||||| || || ||| ||| ||| Sbjct 3563 CAAATCTTCGTGAAAACTCTCACCGGTAAAACCATCACCCTTGAAGTTGAAGCCTCTGAC 3622 Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043 || || || ||||| ||| ||||| || ||||||||||| || ||||| ||||||||| Sbjct 3623 ACAATAGAAAACGTAAAAGCTAAGATCCAAGACAAAGAAGGCATTCCTCCTGACCAGCAA 3682 Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103 || | |||||||| || |||||| | ||||| || ||||| || | || |||||| || Sbjct 3683 CGTTTGATCTTCGCTGGTAAACAGTTGGAAGACGGTAGGACACTCTCAGACTATAACATC 3742 Query 178104 CAAAAAGAATCAACACTGCATCTTGTTTTG 178133 || |||||||| || || ||||| ||| || Sbjct 3743 CAGAAAGAATCTACTCTTCATCTGGTTCTG 3772 Score = 185 bits (204), Expect = 2e-41 Identities = 170/215 (79%), Gaps = 0/215 (0%) Strand=Plus/Plus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983 |||||||| ||||||||||||||||| ||||| ||||| || || || ||| |||||| Sbjct 4247 CAAATTTTTGTGAAAACTCTCACAGGTAAAACCATCACTCTTGAAGTCGAAGCTTCAGAC 4306 Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043 || || || ||||| || || |||||||||||||||||||||||||| || || || Sbjct 4307 ACTATTGAAAACGTGAAGGCCAAAATTCAGGACAAAGAAGGAATCCCTCCAGATCAACAG 4366 Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103 || | |||||||| || || || || ||||| || || |||||| | ||||| ||| || Sbjct 4367 CGTTTAATCTTCGCTGGCAAGCAACTGGAAGACGGCAGAACTCTTTCTGATTACAACATC 4426 Query 178104 CAAAAAGAATCAACACTGCATCTTGTTTTGAGACT 178138 ||||||||||| ||||| || | ||||| |||| Sbjct 4427 CAAAAAGAATCTACACTCCACTTAGTTTTACGACT 4461 Score = 176 bits (194), Expect = 1e-38 Identities = 165/210 (79%), Gaps = 0/210 (0%) Strand=Plus/Plus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983 ||||| ||||||||||||||||| || ||||| ||||| || || || ||| ||| ||| Sbjct 3791 CAAATCTTCGTGAAAACTCTCACCGGTAAAACCATCACTCTTGAAGTTGAAGCCTCTGAC 3850 Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043 || || || ||||| ||| || || || ||||||||||| || ||||| ||||||||| Sbjct 3851 ACAATAGAAAACGTAAAAGCTAAAATCCAAGACAAAGAAGGCATTCCTCCTGACCAGCAA 3910 Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103 || | |||||||| || |||||| | ||||| || ||||| || | || |||||| || Sbjct 3911 CGTTTGATCTTCGCTGGTAAACAGTTGGAAGACGGTAGGACACTCTCAGACTATAACATC 3970 Query 178104 CAAAAAGAATCAACACTGCATCTTGTTTTG 178133 || |||||||| || || ||||| ||| || Sbjct 3971 CAGAAAGAATCTACTCTTCATCTGGTTCTG 4000 Score = 158 bits (174), Expect = 3e-33 Identities = 161/210 (77%), Gaps = 0/210 (0%) Strand=Plus/Plus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983 || || || ||||| ||||| || || ||||| ||||||||||| || ||| |||||| Sbjct 3335 CAGATCTTTGTGAAGACTCTTACGGGTAAAACCATCACCCTCGAAGTCGAAGCTTCAGAC 3394 Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043 || || || || || ||| || || || |||||||| ||||| || ||||| ||||| Sbjct 3395 ACTATTGAAAATGTGAAAGCCAAAATCCAAGACAAAGAGGGAATTCCCCCGGATCAGCAG 3454 Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103 || || || || || || ||||| || |||||||| || ||||| | |||||||| | Sbjct 3455 CGTCTGATTTTTGCTGGCAAACAACTTGAAGATGGCAGAACTCTCTCTGATTATAATATT 3514 Query 178104 CAAAAAGAATCAACACTGCATCTTGTTTTG 178133 ||||||||||| ||||| ||||| ||| || Sbjct 3515 CAAAAAGAATCCACACTTCATCTGGTTCTG 3544 >seq3876 Length=890137 Score = 185 bits (204), Expect = 2e-41 Identities = 165/207 (80%), Gaps = 0/207 (0%) Strand=Plus/Minus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983 ||||||||||| ||||| | || |||||||| ||||| | || || || || ||| Sbjct 521285 CAAATTTTCGTCAAAACATTGACCGGAAAAACCATCACGTTGGAAGTCGAGGCATCTGAC 521226 Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043 || ||||| || |||||| ||| ||||| |||||||||||||||||||| || ||||| Sbjct 521225 ACGATCGAAAATGTCAAAGCAAAAATTCAAGACAAAGAAGGAATCCCTCCAGATCAGCAG 521166 Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103 || | |||||||||||||||||||| |||||||| | |||||| | || || ||| | Sbjct 521165 AGATTGATCTTCGCCGGAAAACAGCTTGAAGATGGCCGCACTCTTTCTGACTACAACATT 521106 Query 178104 CAAAAAGAATCAACACTGCATCTTGTT 178130 ||||||||||| ||||||||| | ||| Sbjct 521105 CAAAAAGAATCCACACTGCATTTGGTT 521079 Score = 176 bits (194), Expect = 1e-38 Identities = 168/215 (78%), Gaps = 0/215 (0%) Strand=Plus/Minus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983 ||||||||||| ||||| | || ||||| || ||||| | || || || || ||| Sbjct 520829 CAAATTTTCGTCAAAACATTGACCGGAAAGACCATCACATTGGAAGTTGAGGCATCTGAC 520770 Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043 || || |||||||| ||| ||| ||||||||||| ||||||||||||||||||||||| Sbjct 520769 ACGATTGAGAACGTGAAAGCAAAAATTCAGGACAAGGAAGGAATCCCTCCGGACCAGCAG 520710 Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103 | | |||||||||||||||||||| |||||||| | || ||| | || || ||| | Sbjct 520709 AGGTTGATCTTCGCCGGAAAACAGCTTGAAGATGGCCGTACCCTTTCTGACTACAACATT 520650 Query 178104 CAAAAAGAATCAACACTGCATCTTGTTTTGAGACT 178138 ||||| ||||| ||| ||||| | ||||| || || Sbjct 520649 CAAAAGGAATCCACATTGCATTTGGTTTTAAGGCT 520615 Score = 176 bits (194), Expect = 1e-38 Identities = 163/207 (79%), Gaps = 0/207 (0%) Strand=Plus/Minus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983 || || || || ||||| || ||||||||||| ||||| | || || || || ||| Sbjct 521513 CAGATCTTTGTCAAAACCCTGACAGGAAAAACCATCACGTTGGAAGTCGAGGCATCTGAC 521454 Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043 || ||||| || |||||| ||| ||||| |||||||||||||||||||| || ||||| Sbjct 521453 ACGATCGAAAATGTCAAAGCAAAAATTCAAGACAAAGAAGGAATCCCTCCAGATCAGCAG 521394 Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103 || | || ||||||||||||||||| |||||||| | |||||| | || || ||| | Sbjct 521393 AGATTGATTTTCGCCGGAAAACAGCTTGAAGATGGCCGCACTCTTTCTGACTACAACATT 521334 Query 178104 CAAAAAGAATCAACACTGCATCTTGTT 178130 ||||||||||| ||||||||| | ||| Sbjct 521333 CAAAAAGAATCCACACTGCATTTGGTT 521307 Score = 170 bits (188), Expect = 5e-37 Identities = 162/207 (78%), Gaps = 0/207 (0%) Strand=Plus/Minus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983 |||||||| || ||||| ||||| || || || ||||| || || || ||| || ||| Sbjct 520601 CAAATTTTTGTCAAAACGCTCACCGGTAAGACAATCACTCTGGAAGTCGAAGCGTCGGAC 520542 Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043 || || |||||||| ||| ||| ||||||||||| ||||||||||| ||||||||||| Sbjct 520541 ACGATTGAGAACGTGAAAGCAAAAATTCAGGACAAGGAAGGAATCCCCCCGGACCAGCAG 520482 Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103 | | |||||||||||||||||||| ||||| || | || ||| | ||||||||| | Sbjct 520481 AGGTTGATCTTCGCCGGAAAACAGCTTGAAGACGGTCGCACACTTTCAGATTATAACATT 520422 Query 178104 CAAAAAGAATCAACACTGCATCTTGTT 178130 || || ||||| || ||||| | ||| Sbjct 520421 CAGAAGGAATCGACTTTGCATTTGGTT 520395 Score = 167 bits (184), Expect = 6e-36 Identities = 166/215 (77%), Gaps = 0/215 (0%) Strand=Plus/Minus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983 ||||||||||| || || | |||||||| || ||||| | || || || || ||| Sbjct 520373 CAAATTTTCGTCAAGACATTAACAGGAAAGACCATCACGTTGGAAGTTGAGGCGTCGGAC 520314 Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043 || |||||||| |||||| || ||||| ||||| |||||||||||||| || ||||| Sbjct 520313 ACGATCGAGAATGTCAAAGCCAAAATTCAAGACAAGGAAGGAATCCCTCCAGATCAGCAG 520254 Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103 | | ||||| |||||||||||||||||||| || | || ||| | ||||||||| | Sbjct 520253 AGGTTGATCTTTGCCGGAAAACAGCTCGAAGACGGCCGTACGCTTTCTGATTATAACATT 520194 Query 178104 CAAAAAGAATCAACACTGCATCTTGTTTTGAGACT 178138 || || ||||| || |||||| | |||||||| || Sbjct 520193 CAGAAGGAATCTACCCTGCATTTAGTTTTGAGGCT 520159 Score = 161 bits (178), Expect = 2e-34 Identities = 160/207 (77%), Gaps = 0/207 (0%) Strand=Plus/Minus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983 ||||||||||| ||||| | || ||||| || ||||| | || || || || ||| Sbjct 521057 CAAATTTTCGTCAAAACATTGACCGGAAAGACCATCACGTTGGAAGTTGAGGCATCTGAC 520998 Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043 || ||||| || |||||| ||| ||||| ||||||||||||||||||||||| |||||| Sbjct 520997 ACGATCGAAAATGTCAAAGCAAAAATTCAAGACAAAGAAGGAATCCCTCCGGATCAGCAA 520938 Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103 || | ||||| || ||||||||||| |||||||| | || ||| | || || || | Sbjct 520937 AGATTGATCTTTGCTGGAAAACAGCTTGAAGATGGCCGCACACTTTCTGACTACAATATT 520878 Query 178104 CAAAAAGAATCAACACTGCATCTTGTT 178130 || || ||||| ||||||||| | ||| Sbjct 520877 CAGAAGGAATCCACACTGCATTTGGTT 520851 Score = 158 bits (174), Expect = 3e-33 Identities = 164/215 (76%), Gaps = 0/215 (0%) Strand=Plus/Minus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983 || ||||| || || |||||||| || ||||| ||||| || ||||| || || ||| Sbjct 520145 CAGATTTTTGTCAAGACTCTCACTGGTAAAACTATCACACTGGAGGTTGAGGCTTCGGAC 520086 Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043 || ||||| ||||| || || ||||| || |||||||| || ||||| || ||||| Sbjct 520085 ACGATCGAAAACGTGAAGGCGAAAATTCAAGATAAAGAAGGCATTCCTCCCGATCAGCAG 520026 Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103 | | ||||| |||||||||||||||||||| || | || ||| | ||||||||| | Sbjct 520025 AGGTTGATCTTTGCCGGAAAACAGCTCGAAGACGGCCGTACGCTTTCTGATTATAACATT 519966 Query 178104 CAAAAAGAATCAACACTGCATCTTGTTTTGAGACT 178138 || || ||||| || |||||| | |||||||| || Sbjct 519965 CAGAAGGAATCTACCCTGCATTTGGTTTTGAGGCT 519931 Score = 129 bits (142), Expect = 1e-24 Identities = 149/201 (74%), Gaps = 0/201 (0%) Strand=Plus/Minus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983 || ||||||||||| || | || || || || || ||||| || || ||| || ||| Sbjct 521741 CAGATTTTCGTGAAGACATTGACCGGGAAGACCATAACCCTTGAAGTTGAAGCTTCTGAC 521682 Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043 ||||||||||| || ||| |||||| || || || ||||| ||||| || || ||||| Sbjct 521681 ACCATCGAGAATGTAAAAGCAAAGATCCAAGATAAGGAAGGTATCCCACCCGATCAGCAG 521622 Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103 || | |||||||| ||||| ||||| ||||| ||| | || | ||||||| || | Sbjct 521621 CGTTTGATCTTCGCTGGAAAGCAGCTTGAAGACGGACGTACCTTATCCGATTACAATATT 521562 Query 178104 CAAAAAGAATCAACACTGCAT 178124 || || ||||| || || ||| Sbjct 521561 CAGAAGGAATCCACTCTCCAT 521541 >seq4069 Length=1127261 Score = 170 bits (188), Expect = 5e-37 Identities = 150/187 (80%), Gaps = 0/187 (0%) Strand=Plus/Plus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983 || || ||||||||||| ||||| || ||||| |||||||||||||| || ||| || Sbjct 161551 CAGATCTTCGTGAAAACCCTCACGGGTAAAACCATCACCCTCGAGGTAGAGGCCTCCGAT 161610 Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043 ||||||||||| ||||| ||||| |||||||| || ||||| || || || || || Sbjct 161611 ACCATCGAGAATGTCAAGGCCAAGATCCAGGACAAGGAGGGAATTCCGCCAGATCAACAG 161670 Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103 ||||| ||||||||||| ||||| || || |||||| | ||||| |||||||||| || Sbjct 161671 CGACTCATCTTCGCCGGCAAACAACTGGAGGATGGACGCACTCTGTCCGATTATAATATC 161730 Query 178104 CAAAAAG 178110 ||||||| Sbjct 161731 CAAAAAG 161737 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1203659900367862