Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Trachymyrmex_20zeteki_20[refseq_20GCF_5F001594055.1_202016-03-31]
4,623 sequences; 267,973,152 total letters
Query= NC_033775.1
Length=376207
Score E
Sequences producing significant alignments: (Bits) Value
seq4552 192 1e-43
seq3876 185 2e-41
seq4069 170 5e-37
>seq4552
Length=86203
Score = 192 bits (212), Expect = 1e-43
Identities = 168/208 (81%), Gaps = 1/208 (0%)
Strand=Plus/Plus
Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983
||||| ||||||||||||||||| || ||||| || |||||||| || ||| ||||||
Sbjct 4019 CAAATCTTCGTGAAAACTCTCACCGGTAAAACCATTACCCTCGAAGTCGAAGCTTCAGAC 4078
Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043
||||| || ||||| || || || ||||||||||| ||||| || ||||| || ||
Sbjct 4079 ACCATTGAAAACGTAAAGGCTAAAATCCAGGACAAAGAGGGAATTCCACCGGATCAACAG 4138
Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103
|| || ||||||||||| ||||| || |||||||| || |||||| |||| || ||| ||
Sbjct 4139 CGTCTGATCTTCGCCGGTAAACAACTGGAAGATGGCAGAACTCTTTCCGACTACAACATC 4198
Query 178104 CAAAAAGAATCAACACTGCATCTTGTTT 178131
||||||||||| ||||| || |||| ||
Sbjct 4199 CAAAAAGAATCCACACTTCA-CTTGGTT 4225
Score = 185 bits (204), Expect = 2e-41
Identities = 167/210 (80%), Gaps = 0/210 (0%)
Strand=Plus/Plus
Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983
||||| || || ||||| ||||| || ||||| |||||||| ||||||||| || |||
Sbjct 3107 CAAATCTTTGTAAAAACCCTCACTGGGAAAACCATCACCCTTGAGGTGGAAGCTTCTGAC 3166
Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043
|| || |||||||||||| ||||| || ||||||||||| || ||||| || ||||||
Sbjct 3167 ACTATAGAGAACGTCAAAGCTAAGATCCAAGACAAAGAAGGTATTCCTCCAGATCAGCAA 3226
Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103
|| | ||||| || ||||| || || || ||||| || || ||| ||||||| ||| ||
Sbjct 3227 CGTTTAATCTTTGCTGGAAAGCAACTAGAGGATGGCAGAACCCTTTCCGATTACAACATC 3286
Query 178104 CAAAAAGAATCAACACTGCATCTTGTTTTG 178133
|| || ||||| ||||| ||||||||| ||
Sbjct 3287 CAGAAGGAATCTACACTTCATCTTGTTCTG 3316
Score = 185 bits (204), Expect = 2e-41
Identities = 167/210 (80%), Gaps = 0/210 (0%)
Strand=Plus/Plus
Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983
||||| ||||||||||||||||| || ||||| |||||||| || || ||| ||| |||
Sbjct 3563 CAAATCTTCGTGAAAACTCTCACCGGTAAAACCATCACCCTTGAAGTTGAAGCCTCTGAC 3622
Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043
|| || || ||||| ||| ||||| || ||||||||||| || ||||| |||||||||
Sbjct 3623 ACAATAGAAAACGTAAAAGCTAAGATCCAAGACAAAGAAGGCATTCCTCCTGACCAGCAA 3682
Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103
|| | |||||||| || |||||| | ||||| || ||||| || | || |||||| ||
Sbjct 3683 CGTTTGATCTTCGCTGGTAAACAGTTGGAAGACGGTAGGACACTCTCAGACTATAACATC 3742
Query 178104 CAAAAAGAATCAACACTGCATCTTGTTTTG 178133
|| |||||||| || || ||||| ||| ||
Sbjct 3743 CAGAAAGAATCTACTCTTCATCTGGTTCTG 3772
Score = 185 bits (204), Expect = 2e-41
Identities = 170/215 (79%), Gaps = 0/215 (0%)
Strand=Plus/Plus
Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983
|||||||| ||||||||||||||||| ||||| ||||| || || || ||| ||||||
Sbjct 4247 CAAATTTTTGTGAAAACTCTCACAGGTAAAACCATCACTCTTGAAGTCGAAGCTTCAGAC 4306
Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043
|| || || ||||| || || |||||||||||||||||||||||||| || || ||
Sbjct 4307 ACTATTGAAAACGTGAAGGCCAAAATTCAGGACAAAGAAGGAATCCCTCCAGATCAACAG 4366
Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103
|| | |||||||| || || || || ||||| || || |||||| | ||||| ||| ||
Sbjct 4367 CGTTTAATCTTCGCTGGCAAGCAACTGGAAGACGGCAGAACTCTTTCTGATTACAACATC 4426
Query 178104 CAAAAAGAATCAACACTGCATCTTGTTTTGAGACT 178138
||||||||||| ||||| || | ||||| ||||
Sbjct 4427 CAAAAAGAATCTACACTCCACTTAGTTTTACGACT 4461
Score = 176 bits (194), Expect = 1e-38
Identities = 165/210 (79%), Gaps = 0/210 (0%)
Strand=Plus/Plus
Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983
||||| ||||||||||||||||| || ||||| ||||| || || || ||| ||| |||
Sbjct 3791 CAAATCTTCGTGAAAACTCTCACCGGTAAAACCATCACTCTTGAAGTTGAAGCCTCTGAC 3850
Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043
|| || || ||||| ||| || || || ||||||||||| || ||||| |||||||||
Sbjct 3851 ACAATAGAAAACGTAAAAGCTAAAATCCAAGACAAAGAAGGCATTCCTCCTGACCAGCAA 3910
Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103
|| | |||||||| || |||||| | ||||| || ||||| || | || |||||| ||
Sbjct 3911 CGTTTGATCTTCGCTGGTAAACAGTTGGAAGACGGTAGGACACTCTCAGACTATAACATC 3970
Query 178104 CAAAAAGAATCAACACTGCATCTTGTTTTG 178133
|| |||||||| || || ||||| ||| ||
Sbjct 3971 CAGAAAGAATCTACTCTTCATCTGGTTCTG 4000
Score = 158 bits (174), Expect = 3e-33
Identities = 161/210 (77%), Gaps = 0/210 (0%)
Strand=Plus/Plus
Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983
|| || || ||||| ||||| || || ||||| ||||||||||| || ||| ||||||
Sbjct 3335 CAGATCTTTGTGAAGACTCTTACGGGTAAAACCATCACCCTCGAAGTCGAAGCTTCAGAC 3394
Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043
|| || || || || ||| || || || |||||||| ||||| || ||||| |||||
Sbjct 3395 ACTATTGAAAATGTGAAAGCCAAAATCCAAGACAAAGAGGGAATTCCCCCGGATCAGCAG 3454
Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103
|| || || || || || ||||| || |||||||| || ||||| | |||||||| |
Sbjct 3455 CGTCTGATTTTTGCTGGCAAACAACTTGAAGATGGCAGAACTCTCTCTGATTATAATATT 3514
Query 178104 CAAAAAGAATCAACACTGCATCTTGTTTTG 178133
||||||||||| ||||| ||||| ||| ||
Sbjct 3515 CAAAAAGAATCCACACTTCATCTGGTTCTG 3544
>seq3876
Length=890137
Score = 185 bits (204), Expect = 2e-41
Identities = 165/207 (80%), Gaps = 0/207 (0%)
Strand=Plus/Minus
Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983
||||||||||| ||||| | || |||||||| ||||| | || || || || |||
Sbjct 521285 CAAATTTTCGTCAAAACATTGACCGGAAAAACCATCACGTTGGAAGTCGAGGCATCTGAC 521226
Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043
|| ||||| || |||||| ||| ||||| |||||||||||||||||||| || |||||
Sbjct 521225 ACGATCGAAAATGTCAAAGCAAAAATTCAAGACAAAGAAGGAATCCCTCCAGATCAGCAG 521166
Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103
|| | |||||||||||||||||||| |||||||| | |||||| | || || ||| |
Sbjct 521165 AGATTGATCTTCGCCGGAAAACAGCTTGAAGATGGCCGCACTCTTTCTGACTACAACATT 521106
Query 178104 CAAAAAGAATCAACACTGCATCTTGTT 178130
||||||||||| ||||||||| | |||
Sbjct 521105 CAAAAAGAATCCACACTGCATTTGGTT 521079
Score = 176 bits (194), Expect = 1e-38
Identities = 168/215 (78%), Gaps = 0/215 (0%)
Strand=Plus/Minus
Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983
||||||||||| ||||| | || ||||| || ||||| | || || || || |||
Sbjct 520829 CAAATTTTCGTCAAAACATTGACCGGAAAGACCATCACATTGGAAGTTGAGGCATCTGAC 520770
Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043
|| || |||||||| ||| ||| ||||||||||| |||||||||||||||||||||||
Sbjct 520769 ACGATTGAGAACGTGAAAGCAAAAATTCAGGACAAGGAAGGAATCCCTCCGGACCAGCAG 520710
Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103
| | |||||||||||||||||||| |||||||| | || ||| | || || ||| |
Sbjct 520709 AGGTTGATCTTCGCCGGAAAACAGCTTGAAGATGGCCGTACCCTTTCTGACTACAACATT 520650
Query 178104 CAAAAAGAATCAACACTGCATCTTGTTTTGAGACT 178138
||||| ||||| ||| ||||| | ||||| || ||
Sbjct 520649 CAAAAGGAATCCACATTGCATTTGGTTTTAAGGCT 520615
Score = 176 bits (194), Expect = 1e-38
Identities = 163/207 (79%), Gaps = 0/207 (0%)
Strand=Plus/Minus
Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983
|| || || || ||||| || ||||||||||| ||||| | || || || || |||
Sbjct 521513 CAGATCTTTGTCAAAACCCTGACAGGAAAAACCATCACGTTGGAAGTCGAGGCATCTGAC 521454
Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043
|| ||||| || |||||| ||| ||||| |||||||||||||||||||| || |||||
Sbjct 521453 ACGATCGAAAATGTCAAAGCAAAAATTCAAGACAAAGAAGGAATCCCTCCAGATCAGCAG 521394
Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103
|| | || ||||||||||||||||| |||||||| | |||||| | || || ||| |
Sbjct 521393 AGATTGATTTTCGCCGGAAAACAGCTTGAAGATGGCCGCACTCTTTCTGACTACAACATT 521334
Query 178104 CAAAAAGAATCAACACTGCATCTTGTT 178130
||||||||||| ||||||||| | |||
Sbjct 521333 CAAAAAGAATCCACACTGCATTTGGTT 521307
Score = 170 bits (188), Expect = 5e-37
Identities = 162/207 (78%), Gaps = 0/207 (0%)
Strand=Plus/Minus
Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983
|||||||| || ||||| ||||| || || || ||||| || || || ||| || |||
Sbjct 520601 CAAATTTTTGTCAAAACGCTCACCGGTAAGACAATCACTCTGGAAGTCGAAGCGTCGGAC 520542
Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043
|| || |||||||| ||| ||| ||||||||||| ||||||||||| |||||||||||
Sbjct 520541 ACGATTGAGAACGTGAAAGCAAAAATTCAGGACAAGGAAGGAATCCCCCCGGACCAGCAG 520482
Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103
| | |||||||||||||||||||| ||||| || | || ||| | ||||||||| |
Sbjct 520481 AGGTTGATCTTCGCCGGAAAACAGCTTGAAGACGGTCGCACACTTTCAGATTATAACATT 520422
Query 178104 CAAAAAGAATCAACACTGCATCTTGTT 178130
|| || ||||| || ||||| | |||
Sbjct 520421 CAGAAGGAATCGACTTTGCATTTGGTT 520395
Score = 167 bits (184), Expect = 6e-36
Identities = 166/215 (77%), Gaps = 0/215 (0%)
Strand=Plus/Minus
Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983
||||||||||| || || | |||||||| || ||||| | || || || || |||
Sbjct 520373 CAAATTTTCGTCAAGACATTAACAGGAAAGACCATCACGTTGGAAGTTGAGGCGTCGGAC 520314
Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043
|| |||||||| |||||| || ||||| ||||| |||||||||||||| || |||||
Sbjct 520313 ACGATCGAGAATGTCAAAGCCAAAATTCAAGACAAGGAAGGAATCCCTCCAGATCAGCAG 520254
Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103
| | ||||| |||||||||||||||||||| || | || ||| | ||||||||| |
Sbjct 520253 AGGTTGATCTTTGCCGGAAAACAGCTCGAAGACGGCCGTACGCTTTCTGATTATAACATT 520194
Query 178104 CAAAAAGAATCAACACTGCATCTTGTTTTGAGACT 178138
|| || ||||| || |||||| | |||||||| ||
Sbjct 520193 CAGAAGGAATCTACCCTGCATTTAGTTTTGAGGCT 520159
Score = 161 bits (178), Expect = 2e-34
Identities = 160/207 (77%), Gaps = 0/207 (0%)
Strand=Plus/Minus
Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983
||||||||||| ||||| | || ||||| || ||||| | || || || || |||
Sbjct 521057 CAAATTTTCGTCAAAACATTGACCGGAAAGACCATCACGTTGGAAGTTGAGGCATCTGAC 520998
Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043
|| ||||| || |||||| ||| ||||| ||||||||||||||||||||||| ||||||
Sbjct 520997 ACGATCGAAAATGTCAAAGCAAAAATTCAAGACAAAGAAGGAATCCCTCCGGATCAGCAA 520938
Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103
|| | ||||| || ||||||||||| |||||||| | || ||| | || || || |
Sbjct 520937 AGATTGATCTTTGCTGGAAAACAGCTTGAAGATGGCCGCACACTTTCTGACTACAATATT 520878
Query 178104 CAAAAAGAATCAACACTGCATCTTGTT 178130
|| || ||||| ||||||||| | |||
Sbjct 520877 CAGAAGGAATCCACACTGCATTTGGTT 520851
Score = 158 bits (174), Expect = 3e-33
Identities = 164/215 (76%), Gaps = 0/215 (0%)
Strand=Plus/Minus
Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983
|| ||||| || || |||||||| || ||||| ||||| || ||||| || || |||
Sbjct 520145 CAGATTTTTGTCAAGACTCTCACTGGTAAAACTATCACACTGGAGGTTGAGGCTTCGGAC 520086
Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043
|| ||||| ||||| || || ||||| || |||||||| || ||||| || |||||
Sbjct 520085 ACGATCGAAAACGTGAAGGCGAAAATTCAAGATAAAGAAGGCATTCCTCCCGATCAGCAG 520026
Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103
| | ||||| |||||||||||||||||||| || | || ||| | ||||||||| |
Sbjct 520025 AGGTTGATCTTTGCCGGAAAACAGCTCGAAGACGGCCGTACGCTTTCTGATTATAACATT 519966
Query 178104 CAAAAAGAATCAACACTGCATCTTGTTTTGAGACT 178138
|| || ||||| || |||||| | |||||||| ||
Sbjct 519965 CAGAAGGAATCTACCCTGCATTTGGTTTTGAGGCT 519931
Score = 129 bits (142), Expect = 1e-24
Identities = 149/201 (74%), Gaps = 0/201 (0%)
Strand=Plus/Minus
Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983
|| ||||||||||| || | || || || || || ||||| || || ||| || |||
Sbjct 521741 CAGATTTTCGTGAAGACATTGACCGGGAAGACCATAACCCTTGAAGTTGAAGCTTCTGAC 521682
Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043
||||||||||| || ||| |||||| || || || ||||| ||||| || || |||||
Sbjct 521681 ACCATCGAGAATGTAAAAGCAAAGATCCAAGATAAGGAAGGTATCCCACCCGATCAGCAG 521622
Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103
|| | |||||||| ||||| ||||| ||||| ||| | || | ||||||| || |
Sbjct 521621 CGTTTGATCTTCGCTGGAAAGCAGCTTGAAGACGGACGTACCTTATCCGATTACAATATT 521562
Query 178104 CAAAAAGAATCAACACTGCAT 178124
|| || ||||| || || |||
Sbjct 521561 CAGAAGGAATCCACTCTCCAT 521541
>seq4069
Length=1127261
Score = 170 bits (188), Expect = 5e-37
Identities = 150/187 (80%), Gaps = 0/187 (0%)
Strand=Plus/Plus
Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983
|| || ||||||||||| ||||| || ||||| |||||||||||||| || ||| ||
Sbjct 161551 CAGATCTTCGTGAAAACCCTCACGGGTAAAACCATCACCCTCGAGGTAGAGGCCTCCGAT 161610
Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043
||||||||||| ||||| ||||| |||||||| || ||||| || || || || ||
Sbjct 161611 ACCATCGAGAATGTCAAGGCCAAGATCCAGGACAAGGAGGGAATTCCGCCAGATCAACAG 161670
Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103
||||| ||||||||||| ||||| || || |||||| | ||||| |||||||||| ||
Sbjct 161671 CGACTCATCTTCGCCGGCAAACAACTGGAGGATGGACGCACTCTGTCCGATTATAATATC 161730
Query 178104 CAAAAAG 178110
|||||||
Sbjct 161731 CAAAAAG 161737
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1203659900367862
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