Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Tribolium_20castaneum_20[refseq_20GCF_5F000002335.3_202016-03-10] 2,082 sequences; 165,944,485 total letters Query= NC_001716.2 Length=153080 Score E Sequences producing significant alignments: (Bits) Value seq2 84.2 2e-11 >seq2 Length=15265516 Score = 84.2 bits (92), Expect = 2e-11 Identities = 90/118 (76%), Gaps = 6/118 (5%) Strand=Plus/Plus Query 56861 TATAACACAGATTATGAGCCATCATAATACTTGGATACA---AACTTTGGAAATCAAAAA 56917 ||||||||| |||||| || ||||||||||| ||||| | |||| |||||||| | Sbjct 563047 TATAACACAAATTATGTGCTATCATAATACTGGGATATAGAGAACT---GAAATCAAGAG 563103 Query 56918 CTACTGTTGGAGTAGCATAATAACCTATTTTCGGTTCTAAAACTGTAGCACCTTTATA 56975 || ||||| || || |||||| | ||||||||| ||||||||| |||| ||| Sbjct 563104 TGGCTATTGGATCAGTGTAGTAACCTCGTCTCGGTTCTATAACTGTAGCTCCTTCATA 563161 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 489715254828800