Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Tribolium_20castaneum_20[refseq_20GCF_5F000002335.3_202016-03-10]
2,082 sequences; 165,944,485 total letters
Query= NC_002686.2
Length=124784
Score E
Sequences producing significant alignments: (Bits) Value
seq4 123 2e-23
>seq4
Length=12290766
Score = 123 bits (136), Expect = 2e-23
Identities = 233/343 (68%), Gaps = 0/343 (0%)
Strand=Plus/Plus
Query 20215 GAGGGGGATTTGGGTCCTGTGTATGGATTTCAATGGAGACATTTTGGAGCTGAATATGTT 20274
||||| ||| |||| || || ||||| || || ||| | || ||||| || || ||
Sbjct 288283 GAGGGCGATCTGGGACCGGTTTATGGTTTCCAGTGGCGCCACTTTGGGGCCGAGTACAAG 288342
Query 20275 GACATGAACACAAATTATTTTGGACAAGGAGTAGATCAATTACAAAATGTTATTAATTTA 20334
| ||| || |||| ||||| | || ||||| ||||||| | |
Sbjct 288343 GGGATGCACTGGGATTACGCCAATCAAGGGATTGACCAATTGGCTCATGTTATCGAAACA 288402
Query 20335 ATTAAAACGAACCCAAACGACAGAAGAATTATTTTATGCGCCTGGAACGCTAAAGATGTG 20394
||| | || || ||||| || ||||| || | || || ||||| | ||| |
Sbjct 288403 ATTCGTAATAAACCCAACGATAGGAGAATCATAATGTGTGCGTGGAATCCAGTGGATATT 288462
Query 20395 CCTTTAATGGCTTTGCCTCCATGTCATATGCTATGCCAATTTTACGTTGCTAATAATGAA 20454
|| |||||| | || || ||||| || || |||| || || ||| |||
Sbjct 288463 CCCGAAATGGCCCTCCCGCCTTGTCACTGCCTCGTGCAGTTTTTTGTGGCAAATGGGGAA 288522
Query 20455 TTGTCGTGTCAAATGTATCAACGATCCGCTGATATGGGACTGGGTGTTCCTTTCAATATT 20514
||||||||| |||| ||| | || ||||||||||| ||||| || || |||||||||
Sbjct 288523 TTGTCGTGTTTGTTGTACCAAAGGTCGGCTGATATGGGGCTGGGGGTGCCGTTCAATATT 288582
Query 20515 GCAAGTTATGCGCTGCTTACGTATATGATTGCACATGTTACAG 20557
||||||||| | || | |||||||||||||||||||||||||
Sbjct 288583 GCAAGTTATTCCTTGTTGACGTATATGATTGCACATGTTACAG 288625
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 399173870955490
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |