Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Tribolium_20castaneum_20[refseq_20GCF_5F000002335.3_202016-03-10]
2,082 sequences; 165,944,485 total letters
Query= NC_005902.1
Length=186250
Score E
Sequences producing significant alignments: (Bits) Value
seq9 84.2 3e-11
>seq9
Length=16184580
Score = 84.2 bits (92), Expect = 3e-11
Identities = 175/258 (68%), Gaps = 6/258 (2%)
Strand=Plus/Plus
Query 164445 TATTTTCAGACGAGCATTTGCTTCTAGATCAGTTCCTATCGAAATAATaaaaaaaTTAGG 164504
||| |||||| |||| ||||| || ||| | || || || | || || | ||
Sbjct 3722366 TATATTCAGAAGAGCTTTTGCGTCAAGAGTTTTCCCGCCAGAGATTGTGGAACAACTGGG 3722425
Query 164505 CTGTAAACATATAAAAGGAATTTTATTACATGGACCTCCTGGTTGCGGTAAAACATTAAT 164564
||| ||||| | ||||| ||| | | |||| ||||| || |||||||| || ||
Sbjct 3722426 CTGCAAACACGTCAAAGGTATTCTTCTCTATGGCCCTCCAGGAACTGGTAAAACTTTGAT 3722485
Query 164565 GGCTCGATGCATTGCTCAAGCTTTTAAATCGC---GACCCGTTAAAATTGTTAATGGTCC 164621
||| ||| |||| || | |||||| | || ||| ||||| || || || ||
Sbjct 3722486 GGCGCGACAAATTGGAAAAA-TGTTAAATGCCAGAGAGCCG--AAAATAGTCAACGGGCC 3722542
Query 164622 TGAATTATTGAACAAATATGTAGGTGAGTCAGAAGCTAATGTTAGAAAGTTGTTTCAGGA 164681
|| | | | |||||||| || ||||| || |||||| | |||| |||||| ||
Sbjct 3722543 CCAAATTCTAGATAAATATGTGGGCGAGTCTGAGGCTAATATCAGAAGATTGTTTGCAGA 3722602
Query 164682 GGCTGAAGAAGAACAAAA 164699
|||||||||||| ||||
Sbjct 3722603 AGCTGAAGAAGAAGAAAA 3722620
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 595856492431200
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |