Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Tribolium_20castaneum_20[refseq_20GCF_5F000002335.3_202016-03-10]
2,082 sequences; 165,944,485 total letters
Query= NC_006639.1
Length=24748
Score E
Sequences producing significant alignments: (Bits) Value
seq908 159 5e-35
>seq908
Length=1147
Score = 159 bits (176), Expect = 5e-35
Identities = 197/267 (74%), Gaps = 2/267 (1%)
Strand=Plus/Plus
Query 16433 GCTAAGCGTCATCGCAGATCTCTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTATC 16492
|| || |||||||| | | | | || ||||||||||| || ||||| ||||| || |||
Sbjct 825 GCAAAACGTCATCGTAAAGTTTTACGTGATAACATCCAGGGCATCACGAAGCCCGCGATC 884
Query 16493 CGTCGTCTGGCTCGTCGTGGTGGAGTCAAGCGTGTCTCTGGATTGGTCTATGAAGAGATT 16552
| | |||| |||||||| ||||| || ||| |||| || | | || ||||| |
Sbjct 885 AGAAGATTGGCACGTCGTGGAGGAGTGAAACGTATCTCCGGTCTCATTTACGAAGAAACC 944
Query 16553 CGTGATGTTTTGAAGATCTTCCTCAAGACCGTTATCCATGATGCTTTCCACTATACCGAG 16612
| | ||| ||||| | |||||| | | ||| || | |||||| || ||| |||||
Sbjct 945 AGAGGTGTCCTGAAGGTATTCCTCGAAAACGTCATTCGTGATGCCGTCACCTACACCGAA 1004
Query 16613 CACGCTAAACGTAAGACTGTCACCTCCATGGATATCGTCTATGCATTGAAACGTCAAGGC 16672
||||| |||||||| || |||||| |||||||| |||| || || ||||| ||||||||
Sbjct 1005 CACGC-AAACGTAAAACCGTCACCGCCATGGATGTCGTTTACGCTTTGAAGCGTCAAGGG 1063
Query 16673 CGTAAGATTTATGGTTTTGGAAGTTAA 16699
|||| |||| || ||||| |||||
Sbjct 1064 CGTACACTTTACGG-TTTGGCGGTTAA 1089
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 79073296412826
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |