Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Tribolium_20castaneum_20[refseq_20GCF_5F000002335.3_202016-03-10]
2,082 sequences; 165,944,485 total letters
Query= NC_011588.1
Length=127615
Score E
Sequences producing significant alignments: (Bits) Value
seq1 96.9 3e-15
>seq1
Length=8676460
Score = 96.9 bits (106), Expect = 3e-15
Identities = 135/187 (72%), Gaps = 2/187 (1%)
Strand=Plus/Plus
Query 69543 tttttCTTTTACCGAGAAGTGGCCGTCGAGCATATTAACTGCGGAAAGACCATTTATTCG 69602
|| ||||| ||||| ||| ||||||||| | || ||||||||||| ||| || |||
Sbjct 2848887 TTCTTCTTCTACCGTGAAACCGCCGTCGAGTACATGAACTGCGGAAAAGTCATCTACTCG 2848946
Query 69603 AGAGTCGCTCGTGTCTGCAAAAATGATCACGGCGGCCCACATCGGTACTCG-GATAAATG 69661
| ||||| | || ||||| | || | || ||||| || | || | || || ||
Sbjct 2848947 CGGGTCGCCAGGGTGTGCAAGGACGACAAAGGGGGCCCTCACCAGT-CACGCGACCGCTG 2849005
Query 69662 GACGTCATTTTTAAAGACTCGACTAAATTGTTCGGTGCCCGGCGAATTCCCCTTTTACTT 69721
|||||| || | || | || || |||||||| | |||||||| | ||||||||||||
Sbjct 2849006 GACGTCGTTCCTCAAAGCACGTCTCAATTGTTCAATTCCCGGCGAGTACCCCTTTTACTT 2849065
Query 69722 TGACGAA 69728
||| |||
Sbjct 2849066 TGATGAA 2849072
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 408232841083952
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |