Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Tribolium_20castaneum_20[refseq_20GCF_5F000002335.3_202016-03-10] 2,082 sequences; 165,944,485 total letters Query= NC_014789.1 Length=184409 Score E Sequences producing significant alignments: (Bits) Value seq4 84.2 3e-11 >seq4 Length=12290766 Score = 84.2 bits (92), Expect = 3e-11 Identities = 101/135 (75%), Gaps = 2/135 (1%) Strand=Plus/Minus Query 107177 GGTGTACCAGCATTGAAGAGGGTTGGTGTTGCGTGAATGAACATA-CCTTGGGACATCTT 107235 ||||| || || | ||||| || | ||| ||||||||| ||| || | |||||| | Sbjct 1761427 GGTGTGCCGGCTGTTAAGAGTGTGGCGCTTGAGTGAATGAA-ATATCCCTCGGACATGTA 1761369 Query 107236 GTCGTATGTCTCCAAGACAGAATCAATGTCTTCCCCGTGGATGCCGATGGCCACACGCAT 107295 | ||| || || | | | || || |||||||| ||||||||||||| ||||||||||| Sbjct 1761368 ATTGTACGTTTCGATGGCTGAGTCGATGTCTTCGCCGTGGATGCCGACAGCCACACGCAT 1761309 Query 107296 AAACATGTATTGGGG 107310 | ||||| ||||| Sbjct 1761308 TAGCATGTGCTGGGG 1761294 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 589965445749680