Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Tribolium_20castaneum_20[refseq_20GCF_5F000002335.3_202016-03-10]
2,082 sequences; 165,944,485 total letters
Query= NC_020845.1
Length=180977
Score E
Sequences producing significant alignments: (Bits) Value
seq3 95.1 1e-14
>seq3
Length=31381287
Score = 95.1 bits (104), Expect = 1e-14
Identities = 429/671 (64%), Gaps = 18/671 (3%)
Strand=Plus/Plus
Query 138183 ACACCAATAGGACCTACGCCAGGACCTCCACCTCCATGTGGAATACAGAATGTCTTATGT 138242
|| || || ||||| | |||||||| ||||||||||| || || ||||| || || ||
Sbjct 15583743 ACCCCGATTGGACCCATACCAGGACCACCACCTCCATGCGGTATGCAGAAGGTTTTGTGC 15583802
Query 138243 AAATTTAGATGACATACATCTGCACCATAGTCACATGGTTTTGCTAGACCTACCTGTGCA 138302
|| || ||||| | || || | || || |||| ||| | || || |||||
Sbjct 15583803 AAGTTCAGATGGGAGACGTCACCGCCGTAATCACCAGGTCGGCACAATCCGACTTGTGCG 15583862
Query 138303 TTTAGATTTGCACCATCGAGATATACCTGACCACCATTGTCATGAACGATCTTACATATC 138362
|| | || |||||||| || || ||||||||||| || | ||| | || | ||| |
Sbjct 15583863 TTCATGTTGGCACCATCTAGGTAGACCTGACCACCGTTTTTATGGATAATATCACACACA 15583922
Query 138363 TGTCTGATGTTTGTTTCAAATACACCATGAGTCGATGGATATGTAATCATAATACATGAG 138422
| | || || ||||| | |||| ||| ||||| || || ||||| || || |||
Sbjct 15583923 TCTGCGACCGTTTCCTCAAAAAGTCCATTAGTTGATGGGTAGGTGATCATCATGCACGAG 15583982
Query 138423 AGTTCAAATGTATTCATGATTGCTTTCTTCTCT---AGATCTTTGATGTCTATGTTGCCA 138479
|| | | || || | | | |||| || ||||||| || || || |||
Sbjct 15583983 AG-ACGACTG--TTGAACTTCTCGGCCTTCGCTTTAAGATCTTCGACATCGATCGAACCA 15584039
Query 138480 TCAT-CATCACACTTGACACCTACAACTTTCATTCCTGCCATGACTGCACTAGCAGGATT 138538
|||| |||| | |||| | ||| ||| || ||||| ||||| || || ||
Sbjct 15584040 TCATGTTTCACTC-TGACTGGTTCAATCCGCATCCCGGCCATTTGGGCACTTGCTGGGTT 15584098
Query 138539 AGTTCCATGTGCTGACTCTGGTATCAGACATACATTTC---TTTTATCATCTCCTGATCC 138595
|| ||||| || | | || |||| ||| || | | |||||||| ||| | |
Sbjct 15584099 CGTCCCATGGGCACTCACAGGAATCAAACAAACGTCCCGATTTTTATCACCTCGGG---C 15584155
Query 138596 TTGATGATATGCTTGGATTGCTAACAGTCCTGCATACTCACCCTGTGATCCTGCGTTAGG 138655
|| ||| || || || || ||| |||||||| ||||| || | || || ||
Sbjct 15584156 TTCATGGTAGCACTGAATGGCCCTCAGACCTGCATATTCACCTTGGGCGCCACTATTCGG 15584215
Query 138656 TTGTAA--TGATATAGAATCAAAACCTGTGATATCACATAACCATTTCTGTAAGTCATCT 138713
|| || | || | | ||| | || ||||| |||| | ||||| | || |
Sbjct 15584216 CTGGAAACTAATCTTG--TCATACCCAGTGATGGCACAAAGATCTTTCTCAAGCTCTGCA 15584273
Query 138714 ATTATCTTTTGATAACCCATGGTCTGTATCATAGGTGTATGTGGATGCACGTTGGCAAAT 138773
| | || ||||| |||| || || || ||| | | ||||| | | | |||
Sbjct 15584274 AACAACTGGTGATACCCCAAAGTTTGATCCAAAGGCGCAAACGGATGAATATCAGTAAAG 15584333
Query 138774 TCTTCCCATGACACAGGCATCAGTTCTGCTGCTGCATTTAGTTTCATTGTGCAACTACCA 138833
| || | || |||||||| |||| | || || ||||||||||||||| ||||
Sbjct 15584334 TGTTTGAAGGAACAAGGCATCATCTCTGTCGTTGAGTTAAGTTTCATTGTGCAAGAACCA 15584393
Query 138834 AGTGGAACCAT 138844
|| || | |||
Sbjct 15584394 AGCGGGATCAT 15584404
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 578983331566640
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |