Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Tribolium_20castaneum_20[refseq_20GCF_5F000002335.3_202016-03-10]
2,082 sequences; 165,944,485 total letters
Query= NC_026421.1
Length=182380
Score E
Sequences producing significant alignments: (Bits) Value
seq1425 224 1e-53
>seq1425
Length=145493
Score = 224 bits (248), Expect = 1e-53
Identities = 425/621 (68%), Gaps = 11/621 (2%)
Strand=Plus/Plus
Query 147013 GTGAGCAGCGAGTAGCTGGCTATGTTGAAGGGGACCCCCAGGCCCATGTCCCCCGACCTC 147072
|| || |||| || ||||| || ||||| || |||||||||||||| ||||||| ||||
Sbjct 66464 GTAAGAAGCGCATAACTGGCGATATTGAACGGCACCCCCAGGCCCATATCCCCCGCCCTC 66523
Query 147073 TGGTACAGCTGGCACGAGAGCTCCCCGTCGGCCACGTAAAACTGGCACAGGATGTGGCAC 147132
||||||||| || ||||| || ||||||||| ||||||| ||| ||| ||
Sbjct 66524 TGGTACAGCAAACAGCTCAGCTCGCCCTCGGCCACGAAAAACTGCGCCAGACAGTGACAT 66583
Query 147133 GGCGGCAGCGCCATGGCGGGCAGGTCCGCGGGGTTCCAGGCCGAGACCACCAGCCGCCTG 147192
|||||||||||||| | ||| || || ||||| ||||| | | | || || |
Sbjct 66584 GGCGGCAGCGCCATTTTGTGCAAATCTTTCGGATTCCACGCCGACATGATAATCCTCC-G 66642
Query 147193 CTC-TCGGGGTTCCTCTTAATCTCTTCGATAACCCACCTCAGCTGGTCCACGCCCTGGCC 147251
|| | || ||| || ||||| | || |||| | |||||||||||| |||| |
Sbjct 66643 ATCGTTCGGATTCGTCCTAATCGTGTGTATGACCCGCGCCAGCTGGTCCACCCCCTCGTT 66702
Query 147252 CCCGTAGTTTGTCCCGCAGTCCAC---GTACCTGGCCCCAAAGTGCCTCCACTGGAAGCC 147308
| ||||| ||| | || | |||| ||||||||||||| ||||||||| ||
Sbjct 66703 CGTGTAGT---CCCCCTGGACCCCCTTGTACTCCGCCCCAAAGTGCCGCCACTGGAACCC 66759
Query 147309 GTACACTGGCCCCAGGTCGCCGGGCTTTCTGTGCGAGAAGCCCGCCCGCTTGAGAAACTC 147368
||| | ||||||||||| || || | | |||||| | | |||||| |
Sbjct 66760 GTAGATGGGCCCCAGGTCCCCCTCCTCGTACTCCTCCAAGCCCACTGAGTCCAGAAACGC 66819
Query 147369 GGGGGACCCGTGGGCGTCCCAGATGCCCACTCCCTTGGCGGAGAGCTCCTTAGAGTCCGT 147428
| | | || ||||||||| ||| ||| || | ||| || || || | |||
Sbjct 66820 GCGACTGCTGTTGGCGTCCCAAATGTGCACGTTTTTCTCCTTGAGGTCGTTCGAATTCGT 66879
Query 147429 GGAGCCCCGGATGAACCAGAGCAGCTCCTCCAAAACCCCCCTCCAAAAGACCCTCTTGGT 147488
||||| ||||||||||||||||||||| | || | | ||| || |||| ||||||
Sbjct 66880 CGAGCCTTTGATGAACCAGAGCAGCTCCTCGACGACAGCGCGCCAGAAAACCCGCTTGGT 66939
Query 147489 GGTCAGCAGGGGGAAC---TGGTCCCTCAGCGAATACCTCGCCTGGTCCCCAAACACAGA 147545
||||||||| || ||| | |||| || || || | | |||| |||| || | ||
Sbjct 66940 GGTCAGCAGCGGAAACACGTTATCCCGGAGGGAGTAGCGCATCTGGACCCCGAAAATCGA 66999
Query 147546 CAGCGTGCCCGTGCCCGTCCTGTCCTCCCTGCGCGTCCCGTTCTCCAAAATCTCCCTGAC 147605
||| || || ||| ||||||||| ||| | ||| || |||| |||| | ||
Sbjct 67000 CAGAGTCCCGATGCGGGTCCTGTCCATCCTCTGGACCCCCTTTTCCAGGATCTGGCGGAT 67059
Query 147606 GGTGTTGAGGTACTGGTGCTC 147626
| | ||||||||||| |||
Sbjct 67060 GTGGGAGAGGTACTGGTACTC 67080
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 583472814724800
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |