Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Tribolium_20castaneum_20[refseq_20GCF_5F000002335.3_202016-03-10]
2,082 sequences; 165,944,485 total letters
Query= NC_029996.1
Length=134272
Score E
Sequences producing significant alignments: (Bits) Value
seq7 96.9 3e-15
>seq7
Length=16482863
Score = 96.9 bits (106), Expect = 3e-15
Identities = 162/232 (70%), Gaps = 2/232 (1%)
Strand=Plus/Plus
Query 39054 CAAGCCTCCTCTTAAGCGTAACACCAAATGTAGCGTGCTCTCTTTTTGTATATTATAATC 39113
|| |||||| || | || || ||||| || || ||| || || || || || |||||
Sbjct 10794068 CATGCCTCCCCTCAGACGCAAAACCAAGTGAAGGGTGGATTCCTTCTGGATGTTGTAATC 10794127
Query 39114 GG-CAAGTGTTCGTTCGTCATCAAGCTGTTTGCCCGCAAATATAAGACGCTGCTGGTCGG 39172
|| |||| || ||| |||| || || ||||| || || || || | |||||| || || |
Sbjct 10794128 GGACAAG-GTGCGTCCGTCTTCGAGTTGTTTACCAGCGAAAATCAAACGCTGTTGATCTG 10794186
Query 39173 TGGGCACGCTCTCTTTGTCCATGATTTTCTGTTTGAGCGTCGCCACCGTATCGCTCGACT 39232
|| | || ||| |||||| ||| || ||||| || | | |||||| | ||
Sbjct 10794187 GAGGGATGCCCTCCTTGTCCTGGATCTTGGCTTTGACGTTCTCGATCGTATCAGAGGGCT 10794246
Query 39233 CCACGTCCACCGTGATACTTTTTCCCGTCAGCGTTTTAACAAAGATTTGCAT 39284
| || |||| ||||| | || || || || || ||||| |||||||||||
Sbjct 10794247 CAACTTCCAGAGTGATGGTCTTGCCAGTGAGTGTCTTAACGAAGATTTGCAT 10794298
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 429534700548866
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |