Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Trichoceridae_20sp._20BV-2014_20[genbank_20GCA_5F001014425.1_202015- 05-28] 26,743 sequences; 41,711,596 total letters Query= NC_004003.1 Length=149599 Score E Sequences producing significant alignments: (Bits) Value seq26143 87.8 2e-12 >seq26143 Length=1408 Score = 87.8 bits (96), Expect = 2e-12 Identities = 126/177 (71%), Gaps = 7/177 (4%) Strand=Plus/Plus Query 131353 AGAGTATAAACGAGATCCCAAAAAGATGCATAATGGAACAATAGAGTACACAAGTATAGA 131412 ||| || |||| |||||| ||||| ||||| ||||||||||| ||||| ||| || Sbjct 309 AGACTACAAACCAGATCCTAAAAAAATGCACAATGGAACAATTGAGTATACATCACGTGA 368 Query 131413 TATGCATAAAGGTGTATCTCCGTCTAGGCGAGGAGATTTGGAAATTTTAGGATATTGTAT 131472 | || || || || ||| | | ||| |||||||| |||||| | || ||| | | Sbjct 369 TGCTCACAATGGAGT---TCCAACAATGCGTGGAGATTTTGAAATTCTTGGTTATAATTT 425 Query 131473 AATAAAATGGTTAGGTGGTAAATTGCCATGGGAAGATGATTTAAAAAATTGTAAATA 131529 ||| ||||| | || | | | || |||||||||| |||| |||||| || ||| Sbjct 426 AATTCAATGGATGGGAGTTCAGTTACCATGGGAAGCTGAT----AAAATTTTAGATA 478 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 478428813746520