Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Trichoceridae_20sp._20BV-2014_20[genbank_20GCA_5F001014425.1_202015- 05-28] 26,743 sequences; 41,711,596 total letters Query= NC_006549.1 Length=140131 Score E Sequences producing significant alignments: (Bits) Value seq15244 105 6e-18 >seq15244 Length=2162 Score = 105 bits (116), Expect = 6e-18 Identities = 105/136 (77%), Gaps = 0/136 (0%) Strand=Plus/Plus Query 94872 CAAAGATTAATCTTTGCTGATCTGGAGGAATACCTTCTTTGTCATAAATTTTTGCCTTGA 94931 ||||||| || | ||| |||||||| || ||||||||||| || | ||| || || |||| Sbjct 4 CAAAGATCAAACGTTGTTGATCTGGTGGGATACCTTCTTTATCTTGAATCTTAGCTTTGA 63 Query 94932 CGGCGCCGACAGTGTCAGCGTGGTCGACGTCAATCGTGATGGTTTTTCCAGTAAGAGTTT 94991 | ||| ||| || | | | ||||| |||| |||||||| || || || ||||||| Sbjct 64 CATTTTCGATAGTATCGGAGGGTTCGACCTCAAGGGTGATGGTCTTCCCTGTGAGAGTTT 123 Query 94992 TCACAAAGATCTGCAT 95007 ||||||| |||||||| Sbjct 124 TCACAAAAATCTGCAT 139 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 448141341855480