Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Trichoceridae_20sp._20BV-2014_20[genbank_20GCA_5F001014425.1_202015- 05-28] 26,743 sequences; 41,711,596 total letters Query= NC_007346.1 Length=407339 Score E Sequences producing significant alignments: (Bits) Value seq23677 84.2 6e-11 >seq23677 Length=2206 Score = 84.2 bits (92), Expect = 6e-11 Identities = 94/126 (75%), Gaps = 0/126 (0%) Strand=Plus/Minus Query 27238 GAAGGCGCAATTGTTATTGATGCAAAATCGGGGTTTTATACGGATCCAGTCGCCACACTT 27297 ||||| |||| |||||||| ||||| || | ||| | |||||| | | |||||| Sbjct 869 GAAGGTGCAACAGTTATTGAACCAAAACGTGGATACTATGCTGATCCAATTTCAACACTT 810 Query 27298 GACTTTGCATCACTATATCCATCAATTATGCTTGCTCACAATTTATGTTACTCAACCTTT 27357 || ||||| |||||||||||| |||||| | || || |||||||| || |||| || Sbjct 809 GATTTTGCTTCACTATATCCAAGTATTATGATGGCACATAATTTATGCTATACAACATTA 750 Query 27358 GTTGAA 27363 ||| || Sbjct 749 GTTCAA 744 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1302907012813026