Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Trichoceridae_20sp._20BV-2014_20[genbank_20GCA_5F001014425.1_202015- 05-28] 26,743 sequences; 41,711,596 total letters Query= NC_008586.1 Length=131204 Score E Sequences producing significant alignments: (Bits) Value seq15244 105 6e-18 >seq15244 Length=2162 Score = 105 bits (116), Expect = 6e-18 Identities = 108/141 (77%), Gaps = 0/141 (0%) Strand=Plus/Minus Query 22215 AAAGATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAAC 22274 ||| ||||| |||||||| |||||| | || || || || |||| ||||| || ||| | Sbjct 143 AAATATGCAGATTTTTGTGAAAACTCTCACAGGGAAGACCATCACCCTTGAGGTCGAACC 84 Query 22275 CACCGATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGA 22334 | ||||||| | || || ||||| || |||||||| || || ||||| ||||| || Sbjct 83 CTCCGATACTATCGAAAATGTCAAAGCTAAGATTCAAGATAAAGAAGGTATCCCACCAGA 24 Query 22335 TCAACAACGTCTTATATTTGC 22355 |||||||||| | || ||||| Sbjct 23 TCAACAACGTTTGATCTTTGC 3 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 419591197921795