Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Trichoceridae_20sp._20BV-2014_20[genbank_20GCA_5F001014425.1_202015- 05-28] 26,743 sequences; 41,711,596 total letters Query= NC_008724.1 Length=288047 Score E Sequences producing significant alignments: (Bits) Value seq15244 87.8 3e-12 >seq15244 Length=2162 Score = 87.8 bits (96), Expect = 3e-12 Identities = 93/123 (76%), Gaps = 0/123 (0%) Strand=Plus/Plus Query 68339 TTGTTGGTCGGGTGGAATGCCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGT 68398 |||||| || ||||| || ||||| || ||||||||||| || ||||| ||||| || Sbjct 17 TTGTTGATCTGGTGGGATACCTTCTTTATCTTGAATCTTAGCTTTGACATTTTCGATAGT 76 Query 68399 GTCTGCTGATTCTACTTCCAAGGTGATGGTTTTTCCCGTGAGGGTCTTGACGAATATCTG 68458 || | | ||| || || | ||||||||| || || ||||| || || || || ||||| Sbjct 77 ATCGGAGGGTTCGACCTCAAGGGTGATGGTCTTCCCTGTGAGAGTTTTCACAAAAATCTG 136 Query 68459 CAT 68461 ||| Sbjct 137 CAT 139 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 921314313151960