Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Trichoceridae_20sp._20BV-2014_20[genbank_20GCA_5F001014425.1_202015- 05-28] 26,743 sequences; 41,711,596 total letters Query= NC_011588.1 Length=127615 Score E Sequences producing significant alignments: (Bits) Value seq23211 84.2 2e-11 >seq23211 Length=1793 Score = 84.2 bits (92), Expect = 2e-11 Identities = 140/200 (70%), Gaps = 2/200 (1%) Strand=Plus/Minus Query 69530 TAATGGTTATGTGTTTTTCTTTTACCGAGAAGTGGCCGTCGAGCATATTAACTGCGGAAA 69589 |||||||||||| | ||| |||| || ||| | || | || |||| || || || || Sbjct 1455 TAATGGTTATGTTTATTTTTTTTTTCGTGAAATAGCAATGGAATATATGAATTGTGGTAA 1396 Query 69590 GACCATTTATTCGAGAGTCGCTCGTGTCTGCAAAAATGATCACGGCGGCCCACATCGGTA 69649 | ||||||| | | | ||| | || |||||||||| || || ||| ||| | Sbjct 1395 AATTGTTTATTCACGTATTGGACGTATATGTAAAAATGATCGTGGTGGACCATATCCAT- 1337 Query 69650 CTCG-GATAAATGGACGTCATTTTTAAAGACTCGACTAAATTGTTCGGTGCCCGGCGAAT 69708 || | ||| ||||| ||||||||||| | || |||||||||| || || || || | Sbjct 1336 CTGGTGATCGTTGGACATCATTTTTAAAATCACGTTTAAATTGTTCTGTACCAGGTGATT 1277 Query 69709 TCCCCTTTTACTTTGACGAA 69728 || ||||| ||||| ||| Sbjct 1276 ATCCATTTTATTTTGATGAA 1257 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 408110141166248