Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Trichoceridae_20sp._20BV-2014_20[genbank_20GCA_5F001014425.1_202015- 05-28] 26,743 sequences; 41,711,596 total letters Query= NC_012639.1 Length=141291 Score E Sequences producing significant alignments: (Bits) Value seq15244 84.2 2e-11 >seq15244 Length=2162 Score = 84.2 bits (92), Expect = 2e-11 Identities = 97/131 (74%), Gaps = 0/131 (0%) Strand=Plus/Plus Query 45210 ATCAATCGTTGCTGGTCCGGCGGAATGCCTTCTTTATCTTGAATTTTTTGTTTGATCGCT 45269 ||||| ||||| || || || || || ||||||||||||||||| || ||||| | Sbjct 9 ATCAAACGTTGTTGATCTGGTGGGATACCTTCTTTATCTTGAATCTTAGCTTTGACATTT 68 Query 45270 TCTACGGTGTCGGAAGACTCGACTTCGAGAGTAACCGTTTTGCCGGTTAGAGTTTTTACA 45329 || | || ||||| | ||||| || || || | || || || || |||||||| ||| Sbjct 69 TCGATAGTATCGGAGGGTTCGACCTCAAGGGTGATGGTCTTCCCTGTGAGAGTTTTCACA 128 Query 45330 AAAATTTGCAT 45340 ||||| ||||| Sbjct 129 AAAATCTGCAT 139 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 451852100980280