Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Trichoceridae_20sp._20BV-2014_20[genbank_20GCA_5F001014425.1_202015- 05-28] 26,743 sequences; 41,711,596 total letters Query= NC_014789.1 Length=184409 Score E Sequences producing significant alignments: (Bits) Value seq24992 105 8e-18 >seq24992 Length=2139 Score = 105 bits (116), Expect = 8e-18 Identities = 170/238 (71%), Gaps = 10/238 (4%) Strand=Plus/Minus Query 7065 GGAATCCTCTTCAACCATGAATCACCGAGACGAGGTGCAGACTTTGTCACAAAGAAGATT 7124 ||||| | ||||| ||||||||||| ||| |||||| | |||| || || | || ||| Sbjct 1121 GGAATTTTATTCAATCATGAATCACCTAGAAGAGGTGAAAACTTCGTAACTAGAAAAATT 1062 Query 7125 ACC-GAGG-GTATCAAACAAATCAT--GAAGGGTGAAAAGGAGTTCATTGAATTGGGTAA 7180 || || || |||| || |||| ||| | || || | ||||||||||||| Sbjct 1061 ACAAGATCAGTGGCAAA-AATTCATTGGAA---TCAACTTGAATGTTTTGAATTGGGTAA 1006 Query 7181 CATAAACGCGGAGAGAGATTGGGGTCACGCGAAGGACTATGTTGAAGCCATGTGGCTCAT 7240 || | | | ||||| ||||| || || ||||| ||||||||||| |||||| | || Sbjct 1005 TTTAGATTCTAAAAGAGACTGGGGACATGCCAAGGATTATGTTGAAGCTATGTGGATGAT 946 Query 7241 GCTTCAACAAGAGGAAGCCGACGAATATGTAGTAGCAACGGGTGAGACCCATTCAGTG 7298 |||||||||||| || | | || | |||| | ||||| ||| | || || ||||| Sbjct 945 GCTTCAACAAGAAAAACCTCAAGACTTTGTAATTGCAACTGGTAAAACTCA--CAGTG 890 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 589783576793320